FC931975

Overview
NameFC931975
Unique NameFC931975
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15392 contig Ccv1_Contig15392:2..709. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.349e-55
Identity = 116/207 (56.04%), Postives = 144/207 (69.57%), Query Frame = 2
Query:   92 TPSAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAK----LPAAQSWVANNILPHHPQTIFRYIVLGNEILATSDKVLIASLLPAMRTLKSALDAANLSSVQVSTPHSLGILSTSEP-PSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGVQPQTLNYALFKPNA 697
            TPS    IGVNYGA A+NLP P  VA FL T+TTIDRVKLFDANP F+ AFA T I + V++ N  +PALA     L AA+SW+  N+ P+ P T    ++ GNEIL ++D  LI SLLPAMR L  AL A  L+ V+V+TPH LGIL+ S+  PS   FR GY+  +F  +L+FHR T SPFM NPYPYF  +P+TLNYALF+PN+
Sbjct:   21 TPSL--HIGVNYGANADNLPSPTSVATFLATKTTIDRVKLFDANPTFISAFAGTPISLAVSLPNSALPALADKATGLDAARSWIRANLSPYVPATNVTLLLAGNEILLSTDTNLILSLLPAMRRLAQALKAEGLTGVRVTTPHYLGILAPSDGIPSNASFRAGYNTKLFPAMLQFHRDTGSPFMVNPYPYFSYRPETLNYALFRPNS 225          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.040e-40
Identity = 87/201 (43.28%), Postives = 132/201 (65.67%), Query Frame = 2
Query:  113 IGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLP-AAQSWVANNILPHHPQTIFRYIVLGNEILATSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGVQ----PQTLNYALFKPNA 697
            IGVNYG +A+NLPPP +    L++ T+I +V+L+ A+P  ++A A T + + +   NGD+P+LA  P AA  W+ +N+LP +P +    I +GNEIL ++D  L+  LLPAM+ ++ AL+A +L   ++VST +S+ +L +S+PPS+G F  GY   +   IL+F   T SPF  NPYP+F  Q    P+TL + LF+PNA
Sbjct:   26 IGVNYGQVADNLPPPSETVKLLQS-TSIQKVRLYGADPAIIKALAGTGVGIVIGAANGDVPSLASDPNAATQWINSNVLPFYPASKIMLITVGNEILMSNDPNLVNQLLPAMQNVQKALEAVSLGGKIKVSTVNSMTVLGSSDPPSSGSFAAGYQTGL-KGILQFLSDTGSPFAINPYPFFAYQSDPRPETLAFCLFEPNA 224          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E1311_ARATH (Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.554e-36
Identity = 90/208 (43.27%), Postives = 123/208 (59.13%), Query Frame = 2
Query:   89 ITPSAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPAAQSWVANNILPHHPQTIFRYIVLGNEILATSDKVLIASLLPAMRTLKSALDAANLS-SVQVSTPHSLGILSTSEPPSTGRFRKG-YDRLIFARILEFHRQTKSPFMGNPYPYFGVQPQ----TLNYALFKPN 694
            I P+   SIGVNYG I +NLP P  V   +K+     +VKL+DANP+ L+AF++T I   + +GN  +  +     A +W+  N+ P  P T    I +GNEILA +D  L  +LLPAM+ + SAL  A LS  + V+T HSL IL +S PPS G F+    D L    ILEFHR+T SPF+ N YP+F  +       L++ LF+PN
Sbjct:   21 ILPTTTTSIGVNYGQIGDNLPSPTDVIPLIKS-IGATKVKLYDANPQILKAFSNTGIEFIIGLGNEYLSKMKDPSKALTWIKQNVTPFLPATNITCITIGNEILALNDSSLTTNLLPAMQGVHSALITAGLSDQISVTTAHSLSILKSSFPPSAGEFQPDLLDSL--TPILEFHRKTDSPFLINAYPFFAYKGNPKEVPLDFVLFQPN 225          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500/F10A12.18 PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.931e-35
Identity = 85/200 (42.50%), Postives = 126/200 (63.00%), Query Frame = 2
Query:  113 IGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPA-AQSWVANNILPHHPQTIFRYIVLGNEILATSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGVQPQ----TLNYALFKPN 694
            +G+NYG IANNLP P +VA  L++   I RVKL+DA+P  L +F+++ +   + +GN  +  ++  P  AQ W+   + PH  +T    IV+GNEI  T+D VLI SLLPAM+++ +AL    L   V V++ HSL ILSTS PPS+G F++ + + +   +L+FH Q +SPF+ N YP+F  +       L Y LF+PN
Sbjct:   29 VGINYGQIANNLPSPARVAVLLRS-LNITRVKLYDADPNVLFSFSNSQVDFMIGLGNEYLQNMSTDPTKAQDWLQQRLEPHISKTRITSIVVGNEIFKTNDHVLIQSLLPAMKSVYAALTNLGLEKQVTVTSAHSLDILSTSYPPSSGSFKEEFIQYL-QPLLDFHSQIESPFLINAYPFFAYKDSPKEVPLEYVLFQPN 226          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.528e-35
Identity = 86/209 (41.15%), Postives = 122/209 (58.37%), Query Frame = 2
Query:   95 PSAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPAAQSWVANNILPHHPQTIFRYIVLGNEILATSDKVLIASLLPAMRTLKSAL-DAANLSSVQVSTPHSLGILSTSEPPSTGRFRKGYDRL-IFARILEFHRQTKSPFMGNPYPYFGVQPQ----TLNYALFKPNAAF 703
            P    SIG+NYG +ANNLPPP+ V   LK+     +VKL+DA+P+ LRAFA +   +TV +GN  +  ++    AQ WV  N+  + P T    IV+GNE+L ++   L A+L PAM+++  AL D      + V+T HSL IL  S PPS   FR+  D L     IL+FH +T SP + N YP+F  +      +L++ LF+PN  F
Sbjct:   21 PLIVSSIGINYGQVANNLPPPKNVIPLLKS-VGATKVKLYDADPQALRAFAGSGFELTVALGNEYLAQMSDPIKAQGWVKENVQAYLPNTKIVAIVVGNEVLTSNQSALTAALFPAMQSIHGALVDCGLNKQIFVTTAHSLAILDVSYPPSATSFRR--DLLGSLTPILDFHVKTGSPILINAYPFFAYEENPKHVSLDFVLFQPNQGF 226          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.778e-32
Identity = 79/205 (38.54%), Postives = 121/205 (59.02%), Query Frame = 2
Query:  104 ADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPA-AQSWVANNILPHHPQTIFRYIVLGNEILATSDKVLIASLLPAMRTLKSALDAANLSSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYF----GVQPQTLNYALFKPNAAF 703
            A  IG+NYG   NNLP P Q  NF+K+      VKL+DA+PE L   + TN+ VT+TV N  I AL+     A  WV  NILP++PQT  R++++GNEIL+ +   +  +L+PAMR + ++L    + +++V TP ++  L +S PPS G FR+     +   +L+F   T S F  N +PYF         +L++ALF+ ++ +
Sbjct:   39 ASKIGINYGRRGNNLPSPYQSINFIKS-IKAGHVKLYDADPESLTLLSQTNLYVTITVPNHQITALSSNQTIADEWVRTNILPYYPQTQIRFVLVGNEILSYNSGNVSVNLVPAMRKIVNSLRLHGIHNIKVGTPLAMDSLRSSFPPSNGTFREEITGPVMLPLLKFLNGTNSYFFLNVHPYFRWSRNPMNTSLDFALFQGHSTY 242          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 2.657e-28
Identity = 82/201 (40.80%), Postives = 120/201 (59.70%), Query Frame = 2
Query:  113 IGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPA-AQSWVANNILPHHPQTIFRYIVLGNEILATSDKVLIASLLPAMRTLKSALDAANLS-SVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYF------GVQPQTLNYALFKP 691
            IGVN G    N+P P QV   LK+Q  I+RV+L+DA+   L AFAHT + V ++V N  +  +++  A A +WV  N+  ++P T    I +G+E+L TS     + L+ A++ +++AL  ANL   ++VSTPHS  I+  S PPS   F K +D +I   +L+F + T SP + N YPYF      GV P  L+YALF+P
Sbjct:   23 IGVNIGTEVTNMPSPTQVVALLKSQN-INRVRLYDADRSMLLAFAHTGVQVIISVPNDQLLGISQSNATAANWVTRNVAAYYPATNITTIAVGSEVL-TSLTNAASVLVSALKYIQAALVTANLDRQIKVSTPHSSTIILDSFPPSQAFFNKTWDPVI-VPLLKFLQSTGSPLLLNVYPYFDYVQSNGVIP--LDYALFQP 218          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.657e-28
Identity = 76/204 (37.25%), Postives = 120/204 (58.82%), Query Frame = 2
Query:  104 ADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPA-AQSWVANNILPHHPQTIFRYIVLGNEILATSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGVQPQT----LNYALFKPNA 697
            A  IG+ YG  A+NLP P +V+  ++    I  V+++DAN + L+AFA+T I + + V N D+ A A+  +   +W++NNILP++P T    I +G E+    D      +LPAMR + +AL  + L   +++S+ HSL ILS S PPS+  F K +   +   +LEF  + +SPFM + YPY+  +  T    L YALF+ ++
Sbjct:   24 ASKIGICYGRNADNLPSPNRVSELIQ-HLNIKFVRIYDANIDVLKAFANTGIELMIGVPNADLLAFAQFQSNVDTWLSNNILPYYPSTKITSISVGLEVTEAPDNA-TGLVLPAMRNIHTALKKSGLDKKIKISSSHSLAILSRSFPPSSASFSKKHSAFL-KPMLEFLVENESPFMIDLYPYYAYRDSTEKVPLEYALFESSS 224          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.731e-28
Identity = 80/203 (39.41%), Postives = 115/203 (56.65%), Query Frame = 2
Query:   98 SAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLP-AAQSWVANNILPHHPQTIFRYIVLGNEILATSDKVLIASLLPAMRTLKSALDAANLS-SVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGVQPQT----LNYALFK 688
            S A  IGVN G    N+PPP  +   LK+Q  I  V+L+DAN   L+AFA+T+I V V V N +I  + + P AA +WV  N+  + P T    I +G+E+L T   V    L  A+  +  AL A+NL+  V+VS+P S+ I+    PPST  F   ++  ++ ++L+F + T S FM N YPY+G         L+YALFK
Sbjct:   21 SNAAFIGVNIGTDLTNMPPPSDIVTLLKSQQ-ITHVRLYDANSHMLKAFANTSIEVMVGVTNEEILKIGRFPSAAAAWVNKNVAAYIPSTNITAIAVGSEVLTTIPHV-APILASALNNIHKALVASNLNFKVKVSSPMSMDIMPKPFPPSTSTFSPSWNTTVY-QLLQFLKNTGSFFMLNAYPYYGYTTANGIFPLDYALFK 220          
BLAST of FC931975 vs. ExPASy Swiss-Prot
Match: GUB_NICPL (Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26
Identity = 77/201 (38.31%), Postives = 112/201 (55.72%), Query Frame = 2
Query:  104 ADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPA-AQSWVANNILPHHPQTIFRYIVLGNEIL-ATSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTSEPPSTGRFRKGYDRLIFARILEFHRQTKSPFMGNPYPYFGV----QPQTLNYALF 685
            A S+GV YG + NNLPP  QV    K++  I R++L+D N   L+A   +NI V + V N D+  +A  P+ A +WV  N+    P   FRYI +GNE+   T    L   LLPAMR +++A+ +A L ++++VS+   + ++  S PPS G FR    R     I+ F R+  SP + N YPYF      +  +L YALF
Sbjct:   30 AQSVGVCYGMLGNNLPPASQVVQLYKSK-NIRRMRLYDPNQAALQALRGSNIEVMLGVPNSDLQNIAANPSNANNWVQRNVRNFWPAVKFRYIAVGNEVSPVTGTSSLTRYLLPAMRNIRNAISSAGLQNNIKVSSSVDMTLIGNSFPPSQGSFRNDV-RSFIDPIIGFVRRINSPLLVNIYPYFSYAGNPRDISLPYALF 228          
The following BLAST results are available for this feature:
BLAST of FC931975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
E13B_WHEAT4.349e-5556.04Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E137_ARATH1.040e-4043.28Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E1311_ARATH1.554e-3643.27Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis... [more]
E1314_ARATH2.931e-3542.50Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... [more]
E1310_ARATH8.528e-3541.15Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... [more]
EA6_ARATH1.778e-3238.54Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]
E133_ARATH2.657e-2840.80Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E1312_ARATH2.657e-2837.25Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E134_ARATH7.731e-2839.41Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
GUB_NICPL1.116e-2638.31Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionC34203C02EF PostHarveN Citrus clementina cDNA clone C34203C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931975 ID=FC931975; Name=FC931975; organism=Citrus clementina; type=EST; length=708bp
GCTCCTTCGCTTCTCAATCATGGCTGTTACTGTTACTAAACTCTCTCAAT
TCCTCCTCTTCCTCTTCCTCTCCCTGTCTTGCAACGCCATCACCCCCTCC
GCCGCTGACTCCATCGGAGTCAACTACGGCGCCATCGCCAACAACCTCCC
GCCACCTCAGCAAGTAGCCAATTTCCTCAAAACCCAAACCACCATAGACC
GCGTCAAGCTCTTCGACGCCAACCCCGAATTCCTCCGCGCCTTCGCCCAC
ACAAACATCCCCGTCACCGTCACAGTCGGCAACGGCGACATACCTGCCCT
CGCAAAACTCCCCGCCGCCCAGTCCTGGGTCGCTAACAACATCCTGCCGC
ATCACCCCCAGACCATCTTCAGATACATCGTCCTCGGCAACGAAATCTTG
GCCACGTCGGATAAAGTCCTCATCGCTTCTCTCCTGCCCGCCATGAGAAC
TCTTAAATCAGCTCTCGATGCTGCCAATCTGAGCAGCGTCCAGGTGTCGA
CACCTCATTCCCTGGGGATTTTATCAACCTCTGAGCCGCCGAGTACCGGA
AGGTTCCGTAAAGGTTACGATAGGCTTATCTTTGCTAGGATTCTCGAGTT
CCACAGACAGACTAAATCCCCGTTTATGGGTAACCCCTACCCGTATTTTG
GGGTTCAGCCTCAGACGCTCAACTACGCTTTGTTTAAACCAAACGCGGCG
TTTTTGAT
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