FC931990

Overview
NameFC931990
Unique NameFC931990
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14597 contig Ccv1_Contig14597:326..1013. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931990 vs. ExPASy Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.127e-27
Identity = 55/80 (68.75%), Postives = 66/80 (82.50%), Query Frame = 1
Query:    1 RNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVVLHER 240
            +NRFLV+DTL+F Y KG+DSVL VNK DYD+CNTK P+ ++D GDSE  LDR GPFYFISGN D+C+KGQKL VVV+  R
Sbjct:   53 KNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVISAR 132          
BLAST of FC931990 vs. ExPASy Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19
Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 1
Query:    7 RFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVVLHER 240
            RF V D + F+Y+ G DSVL V K+ Y+SCNT  PL     G+++ KLDRSGPFYFISG + HC+KGQKL +VV+  R
Sbjct:   58 RFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVISPR 135          
BLAST of FC931990 vs. ExPASy Swiss-Prot
Match: ENL3_ARATH (Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 4.942e-16
Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 1
Query:    7 RFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVVLHER 240
            RF V DTL +KY +  DSVL V KD Y +CNT  P     +GD++ KL+RSGP++FISG+  +C +G+KL +VV+  R
Sbjct:   53 RFRVGDTLVWKYDEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVVMSSR 130          
The following BLAST results are available for this feature:
BLAST of FC931990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ENL2_ARATH8.127e-2768.75Early nodulin-like protein 2 OS=Arabidopsis thalia... [more]
ENL1_ARATH2.800e-1956.41Early nodulin-like protein 1 OS=Arabidopsis thalia... [more]
ENL3_ARATH4.942e-1650.00Early nodulin-like protein 3 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionC34203D10EF PostHarveN Citrus clementina cDNA clone C34203D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931990 ID=FC931990; Name=FC931990; organism=Citrus clementina; type=EST; length=688bp
AGAAACAGGTTCCTCGTCAATGATACCCTCTTTTTCAAGTACAAGAAAGG
ATCAGACTCGGTGTTGTTAGTGAACAAAGATGATTACGACAGCTGCAACA
CGAAGAAGCCTTTGCTGAAACTGGATTCGGGTGACTCAGAGTTCAAGCTT
GATCGTTCGGGTCCTTTCTATTTCATAAGTGGAAACCATGATCATTGCCA
AAAGGGACAGAAATTAATCGTCGTCGTTTTGCATGAAAGGCCCCCCCCTC
CCTCAACTGGACCCCCCACCACGAAACCTCCACCGCATGCCCCGTCTCCT
AAGTCTCCTTCTCCGGCCACACAGCCGCCGGCGACTTCCCCCTCCACCTC
ACCAACATCTCATGCACCTTCGGCTAATCCTCCTAAAGGGTCCTCTCCGA
CGCCGGCAACTTCACCTTCCACGTCTTCGCCTTATCCTCCAAAAGGATAC
TCTCCAGTGCCGGCGACTTCACCTTCCACGTCACCATCATCTCATGCGCC
TTCGCCTTATCCTCCAAAAGGGTACTCTCCGGTGCCGGCAACTTCACCTT
CTACGTCACCATCATCATCCCAATCACCTGCGGCTAATGCTCCAACTGGG
CTGTCACCGGCTCCGGGAACTTCCCCCTCCACGTCACCGTCATCGCAACC
ACCTGCGGCTAATGCTCCAACTGGGCTGTCACCGGCTC
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