FC932002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: AB13I_ARATH (Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic OS=Arabidopsis thaliana GN=TGD3 PE=1 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 4.606e-76 Identity = 107/133 (80.45%), Postives = 121/133 (90.98%), Query Frame = 2 Query: 197 IQGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHEFTSSSNPXCSQFASGSLEG 595 ++GVE+RLPSELSGGMKKRVALARS+IFD TKE +EPEVLLYDEPTAGLDPIASTVVEDLIRSVH E+ + PG IASY+VVTHQHSTI+RAVDRL+FLYEGKIVWQGMTHEFT+S+NP QFA+GSL+G Sbjct: 209 LKGVENRLPSELSGGMKKRVALARSLIFDTTKEVIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHMTDEDAVGKPGKIASYLVVTHQHSTIQRAVDRLLFLYEGKIVWQGMTHEFTTSTNPIVQQFATGSLDG 341 HSP 2 Score: 84.7297 bits (208), Expect = 4.606e-76 Identity = 45/55 (81.82%), Postives = 48/55 (87.27%), Query Frame = 3 Query: 15 ESSVLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLK 179 E S LRIGLVFQSAALFDSL+VRENVGFLLYE SKM + QISELV + LAAVGLK Sbjct: 156 EISGLRIGLVFQSAALFDSLSVRENVGFLLYERSKMSENQISELVTQTLAAVGLK 210
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: MKL_MYCTU (Probable ribonucleotide transport ATP-binding protein mkl OS=Mycobacterium tuberculosis GN=mkl PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.702e-19 Identity = 39/127 (30.71%), Postives = 65/127 (51.18%), Query Frame = 2 Query: 203 GVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHEFTSSSNPXCSQFASG 583 G E + P E+SGGM+KR LAR+++ D P+++L DEP +GLDP+ + + LI ++ + + A+ ++VTH + R D + L+ +V G +S P QF +G Sbjct: 155 GDEKKFPGEISGGMRKRAGLARALVLD-------PQIILCDEPDSGLDPVRTAYLSQLIMDINAQID---------ATILIVTHNINIARTVPDNMGMLFRKHLVMFGPREVLLTSDEPVVRQFLNG 265 HSP 2 Score: 44.2838 bits (103), Expect = 3.702e-19 Identity = 20/47 (42.55%), Postives = 32/47 (68.09%), Query Frame = 3 Query: 36 GLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGL 176 G++FQ ALF S+ + +N F L E++K ++ +I ++V E LA VGL Sbjct: 107 GVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRDIVMEKLALVGL 153
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: MKL_MYCBO (Probable ribonucleotide transport ATP-binding protein mkl OS=Mycobacterium bovis GN=mkl PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.702e-19 Identity = 39/127 (30.71%), Postives = 65/127 (51.18%), Query Frame = 2 Query: 203 GVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHEFTSSSNPXCSQFASG 583 G E + P E+SGGM+KR LAR+++ D P+++L DEP +GLDP+ + + LI ++ + + A+ ++VTH + R D + L+ +V G +S P QF +G Sbjct: 155 GDEKKFPGEISGGMRKRAGLARALVLD-------PQIILCDEPDSGLDPVRTAYLSQLIMDINAQID---------ATILIVTHNINIARTVPDNMGMLFRKHLVMFGPREVLLTSDEPVVRQFLNG 265 HSP 2 Score: 44.2838 bits (103), Expect = 3.702e-19 Identity = 20/47 (42.55%), Postives = 32/47 (68.09%), Query Frame = 3 Query: 36 GLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGL 176 G++FQ ALF S+ + +N F L E++K ++ +I ++V E LA VGL Sbjct: 107 GVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRDIVMEKLALVGL 153
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: MKL_MYCLE (Probable ribonucleotide transport ATP-binding protein mkl OS=Mycobacterium leprae GN=mkl PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.378e-18 Identity = 39/127 (30.71%), Postives = 65/127 (51.18%), Query Frame = 2 Query: 203 GVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHEFTSSSNPXCSQFASG 583 G E + P E+SGGM+KR LAR+++ D P+++L DEP +GLDP+ + + LI ++ + + A+ ++VTH + R D + L+ +V G +S P QF +G Sbjct: 143 GDEKKFPGEISGGMRKRAGLARALVLD-------PQIILCDEPDSGLDPVRTAYLSQLIMDINAQID---------ATILIVTHNVNIARTVPDNMGMLFRKHLVMFGPREVLLTSDEPVVRQFLNG 253 HSP 2 Score: 42.3578 bits (98), Expect = 1.378e-18 Identity = 19/47 (40.43%), Postives = 31/47 (65.96%), Query Frame = 3 Query: 36 GLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGL 176 G++FQ ALF S+ + +N F L E++K ++ +I ++V E L VGL Sbjct: 95 GVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRDIVMEKLQLVGL 141
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: Y1087_HAEIN (Uncharacterized ABC transporter ATP-binding protein HI1087 OS=Haemophilus influenzae GN=HI1087 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.119e-17 Identity = 40/133 (30.08%), Postives = 69/133 (51.88%), Query Frame = 2 Query: 197 IQGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHEFTSSSNPXCSQFASGSLEG 595 ++G +PSELSGGM +R ALAR+I D P+++++DEP G DPI+ V+ LI+ +++ N+ S +VV+H + D + + K++ +G + + S + QF G +G Sbjct: 131 LRGAAALMPSELSGGMARRAALARAIALD-------PDLIMFDEPFTGQDPISMGVILSLIKRLNE--------ALNLTS-IVVSHDVEEVLSIADYAYIIADQKVIAEGTSEQLLQSQDLRVVQFLKGESDG 247 HSP 2 Score: 40.817 bits (94), Expect = 7.119e-17 Identity = 19/50 (38.00%), Postives = 33/50 (66.00%), Query Frame = 3 Query: 30 RIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLK 179 R+G++FQS ALF ++ +NV F + E++ + + I ++V L AVGL+ Sbjct: 83 RMGMLFQSGALFTDISTFDNVAFPIREHTHLPENLIRQIVLMKLEAVGLR 132
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: PSTB_MYCGA (Phosphate import ATP-binding protein pstB OS=Mycoplasma gallisepticum GN=pstB PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.554e-16 Identity = 43/121 (35.54%), Postives = 67/121 (55.37%), Query Frame = 2 Query: 230 LSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHE-FTSSSNPXCSQFASGSL 589 LSGG ++R+++AR+I +++PEVLL DEPT+ LDPIA+ +E LI + K S V+VTH + +R D +F YEG+++ G T + FT +N + G + Sbjct: 223 LSGGQQQRLSIARAI-------ALKPEVLLMDEPTSALDPIATNKIEQLIHQLKKS-----------YSIVIVTHSMAQAQRVSDETVFFYEGRVLEHGTTKQIFTQPNNEKTKDYIDGRI 325 HSP 2 Score: 30.8018 bits (68), Expect = 1.554e-16 Identity = 16/49 (32.65%), Postives = 28/49 (57.14%), Query Frame = 3 Query: 30 RIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGL 176 ++G+VFQ F SL++ EN+ + L + +I ++VKE+L L Sbjct: 161 KVGMVFQKPTPF-SLSIYENIAYALKSHGIKDKIKIDQIVKESLEGAAL 208
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: METN_LACJO (Methionine import ATP-binding protein metN OS=Lactobacillus johnsonii GN=metN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.756e-16 Identity = 40/130 (30.77%), Postives = 73/130 (56.15%), Query Frame = 2 Query: 212 DRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHE-FTSSSNPXCSQFASGSLEGQ 598 D P++LSGG ++RVA+AR++ D P++L+ DE T+ LDP + + DL+ ++KK GL + V++TH+ ++R ++++ + +GK++ +G E F QF G+L+ Q Sbjct: 139 DFYPAQLSGGQQQRVAIARALAND-------PDILISDEATSALDPKTTNQILDLLYDLNKK--LGL-------TVVLITHEMDAVKRVANKIVVMEKGKVIEKGELREVFLHPQKQLTRQFVGGALQAQ 252 HSP 2 Score: 35.4242 bits (80), Expect = 5.756e-16 Identity = 19/50 (38.00%), Postives = 32/50 (64.00%), Query Frame = 3 Query: 30 RIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLK 179 +IG++FQ+ L + TV ENV F L ++S++ D+++ + L VGLK Sbjct: 87 KIGMIFQNFNLLNEETVIENVAFAL-QHSRLSDQELEKKSLHLLELVGLK 135
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: METN_GEOKA (Methionine import ATP-binding protein metN OS=Geobacillus kaustophilus GN=metN PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 7.487e-16 Identity = 46/133 (34.59%), Postives = 73/133 (54.89%), Query Frame = 2 Query: 197 IQGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQG-MTHEFTSSSNPXCSQFASGSLE 592 + G ED PS+LSGG K+RV +AR++ + P+VLL DE T+ LDP + + DL+ ++K+ GL + V++TH+ IR+ DR+ + G+IV QG + H F + P +F +E Sbjct: 130 LSGREDAYPSQLSGGQKQRVGIARAL-------ANNPKVLLCDEATSALDPQTTDAILDLLVDINKR--LGL-------TIVLITHEMHVIRKICDRVAVMESGRIVEQGEVLHVFRNPQQPITKRFVKQLIE 246 HSP 2 Score: 30.8018 bits (68), Expect = 7.487e-16 Identity = 20/48 (41.67%), Postives = 29/48 (60.42%), Query Frame = 3 Query: 33 IGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGL 176 IG++FQ L S TVREN+ F L E + + E+ ++ V E + VGL Sbjct: 84 IGMIFQHFNLLWSRTVRENIAFPL-EIAGVPKEERNKRVDELIELVGL 130
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: GLUA_COREF (Glutamate transport ATP-binding protein gluA OS=Corynebacterium efficiens GN=gluA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 9.830e-16 Identity = 40/115 (34.78%), Postives = 67/115 (58.26%), Query Frame = 2 Query: 173 IKDLTEPWIQGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIV 517 +K L I ++ P++LSGG ++RVA+AR++ ++ P+++L+DEPT+ LDP V D++ S+ K+G + V VTH+ RRA DR++F+ +G IV Sbjct: 118 MKLLERVGIANQAEKYPAQLSGGQQQRVAIARAL-------AMNPKIMLFDEPTSALDPEMVNEVLDVMASLAKEG----------MTMVCVTHEMGFARRAADRVLFMSDGAIV 215 HSP 2 Score: 34.2686 bits (77), Expect = 9.830e-16 Identity = 17/48 (35.42%), Postives = 29/48 (60.42%), Query Frame = 3 Query: 33 IGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGL 176 +G+VFQS LF LT+++NV + KM+ + +E+ + L VG+ Sbjct: 79 VGMVFQSFNLFPHLTIKDNVTLGPMKVRKMKKSEANEVAMKLLERVGI 126
BLAST of FC932002 vs. ExPASy Swiss-Prot
Match: YRBF_ECOLI (Uncharacterized ABC transporter ATP-binding protein yrbF OS=Escherichia coli (strain K12) GN=yrbF PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 1.273e-15 Identity = 43/133 (32.33%), Postives = 65/133 (48.87%), Query Frame = 2 Query: 197 IQGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGLANPGNIASYVVVTHQHSTIRRAVDRLIFLYEGKIVWQGMTHEFTSSSNPXCSQFASGSLEG 595 ++G +PSELSGGM +R ALAR+I ++EP+++++DEP G DPI V+ LI + N + VVV+H + D L + KIV G ++ +P QF G +G Sbjct: 134 LRGAAKLMPSELSGGMARRAALARAI-------ALEPDLIMFDEPFVGQDPITMGVLVKLISEL---------NSALGVTCVVVSHDVPEVLSIADHAWILADKKIVAHGSAQALQANPDPRVRQFLDGIADG 250 HSP 2 Score: 35.8094 bits (81), Expect = 1.273e-15 Identity = 18/50 (36.00%), Postives = 30/50 (60.00%), Query Frame = 3 Query: 30 RIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLK 179 R+ ++FQS ALF + V +NV + L E++++ + V L AVGL+ Sbjct: 86 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLR 135 The following BLAST results are available for this feature:
BLAST of FC932002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 252
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932002 ID=FC932002; Name=FC932002; organism=Citrus clementina; type=EST; length=600bpback to top |