FC932007

Overview
NameFC932007
Unique NameFC932007
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15431 contig Ccv1_Contig15431:1..699. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932007 vs. ExPASy Swiss-Prot
Match: RMT2_SCHPO (Arginine N-methyltransferase 2 OS=Schizosaccharomyces pombe GN=rmt2 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.857e-26
Identity = 64/217 (29.49%), Postives = 119/217 (54.84%), Query Frame = 2
Query:   50 KEGEQLCEAARNGDIDKVKALIGSGADVSYFDSDGLTPLMH--------AAKLGHANLVKTLLEAGAPWNALSPSNLSAGDFAMDSGHQEVFEVLLNAGIQAELILGTIARAG--NKNSNSNGDYLEDRVSFSE-----GKLVDSDSKAIMMAWEKPLMEAHAKAIC-SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK 652
            +E   L EA++  D+ K++ L+  GA  S  D +     +H          ++    + K +L  G  WN +  +N + G  A       ++E +++AG+++EL+L  + R    N+  ++N  YL+  +S+++       L+DSD+ A+MM+WE+ +M   A+ I  + G  +LN+GFG+G++DT +Q+  P  H I+E HP+V + M + GW ++
Sbjct:   16 QESLSLLEASKQLDLKKIQNLVDQGAVTSAIDIESGKNALHFIASYAEKETEVQAIEVTKWILSNGGVWNGIDRANETPGCIARRRNLLRLYETIVDAGVRSELLLSLLERKELTNEQLDTNEKYLQSALSYTQPTEDSSSLLDSDANAVMMSWERKIMHRSAEIIAPTKGRRVLNVGFGLGIIDTFLQEKEPSLHVIIEPHPDVLKHMRKNGWMDR 232          
BLAST of FC932007 vs. ExPASy Swiss-Prot
Match: RMT2_ASPOR (Arginine N-methyltransferase 2 OS=Aspergillus oryzae GN=rmt2 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.246e-22
Identity = 66/196 (33.67%), Postives = 93/196 (47.45%), Query Frame = 2
Query:  200 VKTLLEAGAPWNALSPSNLSAGDFAMDSGHQEVFEVLLNAGIQAELIL------------------GTIARAGNKNSNSNGD--------------------------YLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSGGG-HILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK 652
            V+ LL+ GA WN L  +N + G  A   G  E++E L++AG++AEL+L                  G   + G +     G+                          YL+  ++F   +L+D D   +MMAWE  +M   AK +    G  +LN+G GMG+VD  IQ+ SP  H I+EAHPEV   M R GWGEK
Sbjct:   93 VRFLLQEGAIWNDLDNNNETPGCVARRLGLTELYEQLVDAGVRAELLLNRLDGYEELEDDDEEEEEGQEEQTGTEEVEVEGESAPQLVEATTTTETAMETGPDVTNSRYLDSNLTFQNDRLLDQDQNGVMMAWETDIMAKSAKKLLPTSGLRVLNVGHGMGIVDGFIQEQSPAEHHIIEAHPEVVAEMKRKGWGEK 288          
BLAST of FC932007 vs. ExPASy Swiss-Prot
Match: RMT2_ASPFU (Arginine N-methyltransferase 2 OS=Aspergillus fumigatus GN=rmt2 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21
Identity = 65/205 (31.71%), Postives = 96/205 (46.83%), Query Frame = 2
Query:  191 ANLVKTLLEAGAPWNALSPSNLSAGDFAMDSGHQEVFEVLLNAGIQAELILG------------------------------------------TIARAGNKNSNSNGD--------YLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSGGG-HILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK 652
            A  VK LL+ GA WN L  ++ + G  A   G  E++E++++AG++AEL+L                                           T A A    +++ G         YL+  ++F+  +L+D D   +MMAWE  +M   AK +    G  ++NIG GMG+VD  IQ+ SP  H I+EAHP+V   M R GW EK
Sbjct:   95 AETVKYLLQEGAIWNDLDLNDETPGCIARRLGLTELYEMIVDAGVRAELLLNRLDGYEPLSDDEDDQETGQGEDAANEPAAEEDQDGAPELVETTAADASAAEASTEGPGPDVTSSRYLDSNLTFTNDRLLDQDQNGVMMAWETEIMSRSAKKLLPTTGLRVMNIGHGMGIVDGFIQEQSPAAHHIVEAHPDVVAEMKRKGWHEK 299          
BLAST of FC932007 vs. ExPASy Swiss-Prot
Match: RMT2_CRYNE (Arginine N-methyltransferase 2 OS=Cryptococcus neoformans GN=RMT2 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20
Identity = 65/214 (30.37%), Postives = 110/214 (51.40%), Query Frame = 2
Query:   62 QLCEAARNGDIDKVKALIGSGADVSYFDSD-GLTPLMHAAKLGHANLVKTLLEAGAPWNALSPSNLSAGDFAMDSGHQEVFEVLLNAGIQAELILGTIARAGNKNSNSNGDYLEDRVSFSEGK-----LVDSDSKAIMMAWEKP------------LMEAHAKA-ICSGGGHILNIGFGMGLVDTAIQQYSPVT--HTILEAHPEVYERMLRTG 640
            +L +AA+      +  L+  GA   + D D G + L +AA+      ++ LL+ GA WNA+     +AG+  +  G +E + ++ N GI++E            ++  N  +L+ ++++  GK     ++D+D   +MM WE+P            L E H KA + + G  ILN+GFG+G+VD   Q+  P    HTI+EAHP+V E + + G
Sbjct:   18 RLIKAAQTAAPSVLADLLAEGAPAWFQDDDLGWSCLHYAAERKEPECLEVLLQGGAVWNAVDKWGRTAGEICLSLGDEEGWSIIRNEGIRSE---------DKTSAGDNLVFLKSKLTWDVGKDGKERVLDADGNGVMMGWEEPLSYCIVVEHVKRLTEEHPKAELGAEGMSILNVGFGLGIVDRLFQECDPKPSHHTIIEAHPQVLEYIHKKG 222          
BLAST of FC932007 vs. ExPASy Swiss-Prot
Match: RMT2_EMENI (Arginine N-methyltransferase 2 OS=Emericella nidulans GN=rmt2 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19
Identity = 62/205 (30.24%), Postives = 94/205 (45.85%), Query Frame = 2
Query:  200 VKTLLEAGAPWNALSPSNLSAGDFAMDSGHQEVFEVLLNAGIQAEL------------------------------------------------ILGTIARAGNKNSNS-----NGDYLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAICSGGG-HILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK 652
            VK LL+ GA WN L  +N + G  A   G  E+++++++AG++AEL                                                ++ T A A  + +++     +  YL   ++F + +L+D D   +MMAWE  +M   AK +    G  +LN+G GMG+VD  IQ+ SP  H I+EAHP V   M R GW EK
Sbjct:   97 VKLLLQEGAIWNDLDLNNETPGCIARRLGLTELYDMVVDAGVRAELLLNRLDGYEQLSDEEMEEDGEQEQEQQDAAVAADASITNTAEDESVPQLVDTTAAAPPQTADAEPSVTSSRYLNSDLTFQQDRLLDQDQNGVMMAWESDIMAKSAKQLLPTPGLRVLNVGHGMGIVDGFIQEQSPSAHHIIEAHPAVVAEMKRKGWHEK 301          
BLAST of FC932007 vs. ExPASy Swiss-Prot
Match: RMT2_CANGA (Arginine N-methyltransferase 2 OS=Candida glabrata GN=RMT2 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.882e-16
Identity = 58/200 (29.00%), Postives = 97/200 (48.50%), Query Frame = 2
Query:  194 NLVKTLLEAGAPWNALSPSNLSAGDFAMD--SGHQE--VFEVLLNAGIQAELILGTIA------------------------------RAGNKNSNSNGD--------YLEDRVSFSEGKLVDSDSK-AIMMAWEKPLMEAHAKAICS----GGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK 652
            +++  L E GA WN +   N + GD  ++   G++E  +++ ++ AG+ AEL+L  +                                 G  +S S+ D        YL  ++ ++E  L+  ++K  +MM WE  +M+  A  + S    G   +LNIGFGMG++DT IQ+ +P  H I EAHP+V ++M   GW +K
Sbjct:   89 HMMDMLFEYGAGWNFIDFENKTVGDLILERNGGNRESPLYQRVVEAGVSAELLLRKLNGGDVEFIDENEIDICAEASAEVVPKDALDDSTGKVSSVSDDDATAADPDTYLNTKLKYTEDALITENNKDGVMMDWETDIMKLAADTLVSRKPVGESVVLNIGFGMGIIDTFIQERNPKKHYICEAHPDVLKKMKNDGWYQK 288          
BLAST of FC932007 vs. ExPASy Swiss-Prot
Match: RMT2_GIBZE (Arginine N-methyltransferase 2 OS=Gibberella zeae GN=RMT2 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15
Identity = 55/194 (28.35%), Postives = 85/194 (43.81%), Query Frame = 2
Query:  194 NLVKTLLEAGAPWNALSPSNLSAGDFAMDSGHQEVFEVLLNAGIQAELILGTIARAGNKNSNS-NGD---------------------------------------------YLEDRVSFSEGKLVDSDSKAIMMAWEKPLMEAHAKAIC---SGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERM 628
            ++V  L   GA WN +  +N + G  A+  G + ++++ + AG++AEL+   +      +S S +GD                                             YL  ++ + + KLVDSD   +MMAWE  +M     A+    + G  ILNIGFGMG+VD    +  P  H I+EAHP V E +
Sbjct:   89 DIVHDLFLQGAIWNDVDSNNETPGCLALRLGRKSLYQLCIEAGVRAELLFALMGDYEELSSGSEDGDEEMEVQQDDDEEAPQLVSTEDVEPTVEEPKFIPPDAKEKQVTSEEYLNSKLVYDDAKLVDSDLNGVMMAWETDIMRRSVAALIPDSAPGKRILNIGFGMGIVDGMFAELKPSRHHIIEAHPSVLEHL 282          
BLAST of FC932007 vs. ExPASy Swiss-Prot
Match: RMT2_YEAST (Arginine N-methyltransferase 2 OS=Saccharomyces cerevisiae GN=RMT2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.475e-15
Identity = 56/197 (28.43%), Postives = 89/197 (45.18%), Query Frame = 2
Query:  194 NLVKTLLEAGAPWNALSPSNLSAGDFAMD---SGHQEVFEVLLNAGIQAELILGTI------------------------ARAGNKNSNSNGD----------YLEDRVSFSEGKLVDSDSK-AIMMAWEKPLMEAHAKAI-----CSGGGHILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEKN 655
            +++  L E GA WN +   + + GD  ++   S    ++  L+ AG+ AEL+L  +                        A  G K  +   D          YL+  + + +  L+  ++K  +MM WE  +ME  ++ +      +    ILNIGFGMG++DT IQ   P  H I EAHP+V  +M   GW EK+
Sbjct:   93 DMMNILFEYGAGWNFIDYEDKTVGDLFLERNQSRESPLYRRLVEAGVSAELLLRKLNGGDVEFLDTDELIGIEPEESVQTAVDGQKEESVGSDDDATAANQQVYLKTELEYKDDALITKENKDGVMMDWETKIMELASETLFPDPEATNSATILNIGFGMGIIDTFIQARKPYRHYICEAHPDVLAKMKMDGWYEKD 289          
BLAST of FC932007 vs. ExPASy Swiss-Prot
Match: RMT2_ASHGO (Arginine N-methyltransferase 2 OS=Ashbya gossypii GN=RMT2 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 58/205 (28.29%), Postives = 88/205 (42.93%), Query Frame = 2
Query:  197 LVKTLLEAGAPWNALSPSNLSAGDFAMDSGH---QEVFEVLLNAGIQAELIL------------GTIARAGNKNSNSNG---------------------------------DYLEDRVSFSEGKLVDSDSK-AIMMAWEKPLMEAHAKAICSGGG----HILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK 652
            ++ TL + GA WN L      AGD  ++ G+     ++E L+ AG+ AEL+L            G+    G+K  ++                                    YL+  + +  G LV   ++  +MM WE  +M   A +I          +LNIGFGMG++D  +Q+  P  H I EAHP+V  RM R GW E+
Sbjct:   86 IMDTLFQYGAGWNFLDYEQKHAGDLLLEKGYGPGDALYERLVEAGVAAELLLRKVNGGEIEFLDGSDTEMGDKGGSARDVPASADSAPADSAGHSSSEPTAVDADATAAHQDTYLQTELEYIPGALVTKHNRDGVMMDWETDIMRVAAASIVKNREPAECQVLNIGFGMGIIDGFLQEQRPTRHYICEAHPDVLARMRREGWYER 290          
BLAST of FC932007 vs. ExPASy Swiss-Prot
Match: RMT2_KLULA (Arginine N-methyltransferase 2 OS=Kluyveromyces lactis GN=RMT2 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.286e-15
Identity = 56/198 (28.28%), Postives = 89/198 (44.95%), Query Frame = 2
Query:  197 LVKTLLEAGAPWNALSPSNLSAGDFAMDSGHQE---VFEVLLNAGIQAELILGTI--------------------------------------ARAGNKNSNSNGDYLEDRVSFSEGKLVDSDSK-AIMMAWEKPLMEAHAKAICSGGGH----ILNIGFGMGLVDTAIQQYSPVTHTILEAHPEVYERMLRTGWGEK 652
            L+ TLLE GA WN L   N   GD  ++  + +   +++ +++AG+ AEL+L  I                                      A   +  +     YL+  + +++  LV  +++  +MM WE  +M   AK++ S        +LNIGFGMG++D  IQ      H I EAHP+V  +M  TGW +K
Sbjct:   87 LMDTLLEYGAGWNFLDYENKHIGDLVLERKYPQDHCIYQRIVDAGVSAELLLRKIDGGEIEFIEDPEDAATEAATEAATEAEVIEGVTKGSEEAPFEDATAADQATYLKTDLEYTDDALVTKENRDGVMMDWETDIMSMAAKSLVSTRSTDECVVLNIGFGMGIIDNFIQDEKVTKHYICEAHPDVLAKMKETGWFDK 284          
The following BLAST results are available for this feature:
BLAST of FC932007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
RMT2_SCHPO1.857e-2629.49Arginine N-methyltransferase 2 OS=Schizosaccharomy... [more]
RMT2_ASPOR1.246e-2233.67Arginine N-methyltransferase 2 OS=Aspergillus oryz... [more]
RMT2_ASPFU5.234e-2131.71Arginine N-methyltransferase 2 OS=Aspergillus fumi... [more]
RMT2_CRYNE9.871e-2030.37Arginine N-methyltransferase 2 OS=Cryptococcus neo... [more]
RMT2_EMENI8.357e-1930.24Arginine N-methyltransferase 2 OS=Emericella nidul... [more]
RMT2_CANGA3.882e-1629.00Arginine N-methyltransferase 2 OS=Candida glabrata... [more]
RMT2_GIBZE1.129e-1528.35Arginine N-methyltransferase 2 OS=Gibberella zeae ... [more]
RMT2_YEAST1.475e-1528.43Arginine N-methyltransferase 2 OS=Saccharomyces ce... [more]
RMT2_ASHGO1.927e-1528.29Arginine N-methyltransferase 2 OS=Ashbya gossypii ... [more]
RMT2_KLULA3.286e-1528.28Arginine N-methyltransferase 2 OS=Kluyveromyces la... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34203F08EF PostHarveN Citrus clementina cDNA clone C34203F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932007 ID=FC932007; Name=FC932007; organism=Citrus clementina; type=EST; length=698bp
GAGGGTACCGTACCAACAAGAGCGTGGAACACTGTCAGCAGCCATGGAGA
AAGAAGGAGAGCAACTGTGCGAGGCAGCAAGGAATGGTGATATAGACAAG
GTGAAAGCTCTCATAGGCTCAGGAGCTGACGTGTCCTACTTCGACAGCGA
TGGTCTGACCCCACTCATGCACGCCGCCAAGCTCGGCCACGCCAACTTGG
TCAAGACCCTTCTCGAAGCCGGCGCACCCTGGAACGCTCTCTCGCCCTCT
AACCTCTCCGCCGGAGACTTCGCCATGGATTCCGGTCACCAGGAGGTCTT
TGAAGTCCTTCTTAATGCTGGAATTCAGGCAGAGTTGATTCTAGGAACTA
TTGCAAGGGCGGGTAATAAAAACAGTAATTCTAACGGGGATTACTTGGAA
GATAGGGTCAGCTTTAGCGAGGGCAAGCTCGTGGATTCAGATAGCAAGGC
TATCATGATGGCTTGGGAGAAGCCATTGATGGAGGCTCATGCAAAAGCCA
TTTGCTCAGGAGGTGGTCATATACTAAACATTGGCTTTGGAATGGGGCTT
GTGGATACAGCCATTCAGCAGTATTCTCCTGTTACACACACAATCCTGGA
GGCTCACCCTGAGGTGTATGAGCGTATGCTTCGTACTGGTTGGGGTGAAA
AGAATATGTAAAGATTATATTTGGTCGCTGGCAAGACATCTTTCTCAC
back to top