FC932009

Overview
NameFC932009
Unique NameFC932009
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.876e-43
Identity = 88/196 (44.90%), Postives = 128/196 (65.31%), Query Frame = 1
Query:   91 AAPFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKLVIADVQDKLGEELADKLGQDVC-YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS 675
            +A  ++L GKV                LF ++GA++V+AD+QD+LG  L  +LG D   Y+HCD++NE +V   VD AV++FGKLD+M+NNAG+       + +  K D ER++ VN +G FLG KHAARVM P ++G I+ TAS  + ++G  S AYT SK+ ++G  +  A ELG++GIRVNCVSP G+AT ++
Sbjct:    9 SADARKLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASSYVHCDVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLA 204          
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.631e-40
Identity = 89/194 (45.88%), Postives = 121/194 (62.37%), Query Frame = 1
Query:  103 KRLEGKVXXXXXXXXXXXXXXVELFHENGAKLVIADVQDKLGEELADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG-KLDIMYNNAGILDR---SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 672
            KRL+GKV              V LF ++GA++VIAD+ D  GE LA  LG  V ++ CD+S ED+V   VD A+S+ G +LD+  NNAG+L R   +  SIL    ++ +R++ VN +G  LG KHAAR M P++ G I+  AS    + GLG  AYT SK+ I+GL K  A EL  +G+RVNCVSP+G+AT M
Sbjct:   51 KRLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQVSFVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPM 244          
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.633e-38
Identity = 87/202 (43.07%), Postives = 120/202 (59.41%), Query Frame = 1
Query:   88 SAAPFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKLVIADVQDKLGEELADKL-----GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSM 678
            S+ P +RL GKV              V LFH++GAK+ I D+QD LG E+   L      +   +IH D+  ED++ N VD AV  FG LDI+ NNAG+       I +   S+ E   +VN  G FL  KHAARVM+P++KG I+   S    + G+G  +Y  SK+ +LGL + +AAELGQ+GIRVNCVSPY +AT +++
Sbjct:   11 SSLPSQRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHGIRVNCVSPYAVATKLAL 212          
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.143e-22
Identity = 63/173 (36.42%), Postives = 97/173 (56.07%), Query Frame = 1
Query:  166 VELFHENGAKLVIADVQDKLGEELADKLGQD-VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK 681
            V+ F    A +V+AD+ +  GE +  K   D + ++H DI++E    N + +AV KFG LD++ NNAGI       I +   S+  +++NVN  G FL +KHA + M+   KG I+ T S    +A    PAY  SK G+L L + +A +  ++ IRVNCV P  + T ++ K
Sbjct:   22 VQAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVHTDITDEPACQNAIRSAVDKFGGLDVLINNAGI--EIVAPIHEMELSNWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQLTRSMAVDYAKHNIRVNCVCPGIIDTPLNEK 192          
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: Y019_THEMA (Uncharacterized oxidoreductase TM_0019 OS=Thermotoga maritima GN=TM_0019 PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.094e-21
Identity = 62/189 (32.80%), Postives = 102/189 (53.97%), Query Frame = 1
Query:  109 LEGKVXXXXXXXXXXXXXXVELFHENGAKLVIADVQDKLG---EELADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT 666
            LEGKV               +LF ENG K+VIA++ ++ G   EE+  + G DV ++  D+++E+ V N+V   V  +G +D++ NNA ++  S  SI + P  + ER+I VN  G ++ +++ A  M+ +  G I+  AS     +   +  Y+ SK G++ L   LA  L +Y IRV  +SP  + T
Sbjct:    2 LEGKVAVVTGGGQGIGAAIAQLFAENGMKVVIAEIDEEAGVEREEMLRERGLDVTFVKTDVADENSVKNMVRKTVEIYGGVDVLVNNAAVM--SVKSIFERPLEEWERVIRVNLTGPYICSRYCAEEMIKRGGGVIINIASTRAFQSEPDTEPYSASKGGLVALTHSLAVSLSRYHIRVVSISPGWIET 188          
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: HSD_MYCTU (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium tuberculosis GN=fabG3 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.094e-21
Identity = 64/190 (33.68%), Postives = 97/190 (51.05%), Query Frame = 1
Query:  106 RLEGKVXXXXXXXXXXXXXXVELFHENGAKLVIADVQDKLGEELADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS 675
            RL GKV              V      GAK+V  D+ D+ G+ +A +L     Y+H D++   +    VDTAV+ FG L ++ NNAGIL  + G+I D   ++ +R+++VN  G FLG +   + M    +G I+  +S       +    YT +K+ + GL K  A ELG  GIRVN + P  + T M+
Sbjct:    4 RLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADAARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGIL--NIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT 191          
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: HSD_MYCBO (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium bovis GN=fabG3 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.094e-21
Identity = 64/190 (33.68%), Postives = 97/190 (51.05%), Query Frame = 1
Query:  106 RLEGKVXXXXXXXXXXXXXXVELFHENGAKLVIADVQDKLGEELADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS 675
            RL GKV              V      GAK+V  D+ D+ G+ +A +L     Y+H D++   +    VDTAV+ FG L ++ NNAGIL  + G+I D   ++ +R+++VN  G FLG +   + M    +G I+  +S       +    YT +K+ + GL K  A ELG  GIRVN + P  + T M+
Sbjct:    4 RLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADAARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGIL--NIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT 191          
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20
Identity = 62/173 (35.84%), Postives = 95/173 (54.91%), Query Frame = 1
Query:  166 VELFHENGAKLVIADVQDKLGEELADKLGQD-VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK 681
            V+ F    A +V+AD+ +  GE +  K   D + ++  DI++E    + V++AV  FG LD++ NNAGI       I +   SD  +++ VN  G FL +KHA + M+   KG I+ T S    +A    PAY  SK G+L L K +A +  ++ IRVNCV P  + T ++ K
Sbjct:   22 VQAFLGQQANVVVADIDEAQGEAMVRKENNDRLHFVQTDITDEAACQHAVESAVHTFGGLDVLINNAGI--EIVAPIHEMELSDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCSVGGLVAWPDIPAYNASKGGVLQLTKSMAVDYAKHQIRVNCVCPGIIDTPLNEK 192          
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19
Identity = 63/183 (34.43%), Postives = 95/183 (51.91%), Query Frame = 1
Query:  112 EGKVXXXXXXXXXXXXXXVELFHENGAKLVIADVQDKLGEE---LADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 651
            +GKV                +F E GAK+ I D+ ++ G+E   L   +G +  +I  D++ + E I  V   V  FG+LDI+ NNAGI+   +G+I +T + D ++ + VN  G FL +K+A   M  Q  G I+  +S    I       Y++SK  +LGL + LA +   YGIRVN V P
Sbjct:    4 QGKVVLITGAGSGIGKKAAVMFAERGAKVAINDISEEKGKETVELIKSMGGEAAFIFGDVAKDAEQI--VKKTVETFGRLDILVNNAGIVP--YGNIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVDYVDYGIRVNAVCP 182          
BLAST of FC932009 vs. ExPASy Swiss-Prot
Match: Y1385_MYCBO (Uncharacterized oxidoreductase Mb1385 OS=Mycobacterium bovis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.896e-19
Identity = 56/169 (33.14%), Postives = 96/169 (56.80%), Query Frame = 1
Query:  175 FHENGAKLVIADVQDKLGEELADKLGQD--VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS 675
            F   GA++V+ DV  +  E  A +LG D     + CD++  D+V  L+ TAV +FG LD+M NNAGI   +  ++    +   +++I V+  G + G + AA +M  +++G I+  +S   ++  +G   Y+ +K GI+G+ K  A EL   GIRVN ++P  + + M+
Sbjct:   27 FVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAGITRDA--TMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMT 193          
The following BLAST results are available for this feature:
BLAST of FC932009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
MOMAS_ORYSJ2.876e-4344.90Momilactone A synthase OS=Oryza sativa subsp. japo... [more]
TS2_MAIZE6.631e-4045.88Sex determination protein tasselseed-2 OS=Zea mays... [more]
ABA2_ARATH1.633e-3843.07Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN... [more]
BACC2_BACSU2.143e-2236.42Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
Y019_THEMA3.094e-2132.80Uncharacterized oxidoreductase TM_0019 OS=Thermoto... [more]
HSD_MYCTU3.094e-2133.683-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
HSD_MYCBO3.094e-2133.683-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
BACC_BACSU5.836e-2035.84Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
Y325_THEMA1.698e-1934.43Uncharacterized oxidoreductase TM_0325 OS=Thermoto... [more]
Y1385_MYCBO2.896e-1933.14Uncharacterized oxidoreductase Mb1385 OS=Mycobacte... [more]

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Properties
Property NameValue
Genbank descriptionC34203F10EF PostHarveN Citrus clementina cDNA clone C34203F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932009 ID=FC932009; Name=FC932009; organism=Citrus clementina; type=EST; length=701bp
GAAGCCATACCTAGTTTCTTGTTTCTAACCCCTTCTCTGCTTTTAATTAG
TTTCAGGTTTTTGAAGAAAAAAATGAACGGCCCTTCCTCTGCAGCTCCCT
TCAAAAGGTTAGAAGGCAAAGTGGCAATCATCACCGGAGGAGCAAGCGGC
ATCGGAGCAACGGCGGTTGAACTCTTCCATGAAAATGGCGCCAAACTTGT
TATTGCCGATGTCCAGGATAAGCTTGGCGAAGAACTTGCTGATAAGCTGG
GCCAAGATGTTTGCTACATCCATTGTGATATCTCAAATGAAGATGAAGTC
ATCAATCTCGTTGATACCGCCGTTTCTAAATTTGGAAAGCTCGATATCAT
GTACAACAATGCAGGAATTCTTGACCGCAGCTTTGGGAGCATTTTGGACA
CTCCAAAGTCTGATCTAGAACGCTTAATTAATGTAAACACTATAGGTGGT
TTCTTAGGAGCCAAGCATGCTGCAAGAGTCATGGTGCCACAGCAAAAAGG
TTGCATACTGTTTACAGCTAGTGCTTGTACAGAAATTGCAGGGCTTGGCT
CCCCTGCTTATACAATATCCAAATATGGGATTTTAGGACTAGTAAAGTGC
TTGGCAGCAGAGCTTGGACAGTATGGAATAAGAGTAAATTGCGTCTCGCC
TTATGGTTTGGCGACAGGAATGTCGATGAAAGGTGGGGTCGATCCGGCTC
T
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