FC932013

Overview
NameFC932013
Unique NameFC932013
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932013 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.850e-38
Identity = 81/147 (55.10%), Postives = 102/147 (69.39%), Query Frame = 2
Query:  266 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSGNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPK--EGPSRCSSCKKRVGLTGFNVAVVTILCVTSLFG-QHNC 697
            M+H ETGCQ P EGPILCINNCGFFGS ATMNMCSKC+K++++KQ+QAKLAASSI SIVN     +G E + A   +V  + VE K +  QP+  +  SE V   PK  EGP+RCS+C+KRVGLTGFN     + C    +  +H+C
Sbjct:    1 MEHKETGCQQP-EGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVN--GGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDC 144          
BLAST of FC932013 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 6.850e-38
Identity = 81/147 (55.10%), Postives = 102/147 (69.39%), Query Frame = 2
Query:  266 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSGNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPK--EGPSRCSSCKKRVGLTGFNVAVVTILCVTSLFG-QHNC 697
            M+H ETGCQ P EGPILCINNCGFFGS ATMNMCSKC+K++++KQ+QAKLAASSI SIVN     +G E + A   +V  + VE K +  QP+  +  SE V   PK  EGP+RCS+C+KRVGLTGFN     + C    +  +H+C
Sbjct:    1 MEHKETGCQQP-EGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVN--GGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDC 144          
BLAST of FC932013 vs. ExPASy Swiss-Prot
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.603e-37
Identity = 77/153 (50.33%), Postives = 100/153 (65.36%), Query Frame = 2
Query:  266 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSGNGSESVAAATVDVQASSVEPKIISVQPSCASELSESV---EAKPKEGPSRCSSCKKRVGLTGFNVAVVTILCVTSLFGQ-HNCPLTTH 712
            MDHD+TGCQ+PPEGP LC NNCGFFGS ATMNMCSKC+KD++ +Q+Q    AS++      +SS    E+  AA VD++  SVEP  +SVQPS    ++E V   EA   +GPSRC++C KRVGLTGF     ++ C T  +   H+C    H
Sbjct:    1 MDHDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSG--TSSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCNKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYH 151          
BLAST of FC932013 vs. ExPASy Swiss-Prot
Match: SAP4_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.891e-37
Identity = 78/147 (53.06%), Postives = 99/147 (67.35%), Query Frame = 2
Query:  266 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSGNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKP--KEGPSRCSSCKKRVGLTGFNVAVVTILCVTSLFG-QHNC 697
            M+H E GCQ P EGPILCINNCGFFGS ATMNMCSKC+K++++K++QAKLAASSI SIVN    G      A+ +  V  + VE K + VQP+  +  SE V   P  KEGP+RC++C+KRVGLTGFN     + C    +  +H C
Sbjct:    1 MEHKEAGCQQP-EGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNMYCALHRYSDKHEC 146          
BLAST of FC932013 vs. ExPASy Swiss-Prot
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.616e-18
Identity = 53/147 (36.05%), Postives = 73/147 (49.66%), Query Frame = 2
Query:  275 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSGNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFNVAVVTILCVTSLFGQHNCPLTTHC 715
            +E  C+ P EG  LC+NNCGFFGS ATMN+CS CY D+ LKQ Q     S++ S ++   +       A   +     + E K I +          + +  P + P+RC+ C+KRVGLTGF        C T+  G H  P    C
Sbjct:    3 EEHRCETP-EGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLSPVIAPVLENYAAELEIPTTKKTEEKKPIQI---------PTEQPSPPQRPNRCTVCRKRVGLTGF-----MCRCGTTFCGSHRYPEVHGC 134          
BLAST of FC932013 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 7.873e-18
Identity = 57/150 (38.00%), Postives = 81/150 (54.00%), Query Frame = 2
Query:  275 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSGNGSESVAAATVDVQASSVEPKIISVQPSCASELSE--------SVEAKPKEGPSRCSSCKKRVGLTGFNVAVVTILCVTSLFGQ-HNC 697
            +E  CQ P E   LC+NNCGF GS ATMN+CS CY D+ LKQ Q    +SSI S V  + S +   S ++      +S + P ++   PS   E+ E        + E   ++ P+RC++C+KRVGLTGF     T+ C    + + H C
Sbjct:    3 EEHRCQTP-ESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQ---QSSSIKSTVESSLSVSPPSSSSSEI----SSPIIPPLLK-NPSVKLEVPEKKAVISLPTTEQNQQQRPNRCTTCRKRVGLTGFKCRCGTMFCGVHRYPEIHGC 143          
BLAST of FC932013 vs. ExPASy Swiss-Prot
Match: SAP9_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.308e-16
Identity = 49/134 (36.57%), Postives = 66/134 (49.25%), Query Frame = 2
Query:  299 PEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSGNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFNVAVVTILCVTSLFGQ-HNC 697
            PE PILC+NNCGFFGS  T NMCSKCY+D +       +AA  +             E  A        + +EP      P+ A E  ++ +  PK   +RC SC+K+VGLTGF        C T  + + H+C
Sbjct:   17 PEAPILCVNNCGFFGSSMTNNMCSKCYRDFV---KVTTMAAPVV-------------EKKAFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDC 134          
BLAST of FC932013 vs. ExPASy Swiss-Prot
Match: SAP7_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.625e-16
Identity = 46/147 (31.29%), Postives = 78/147 (53.06%), Query Frame = 2
Query:  296 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSGNGSESVAAA----TVDVQASSVEPKIISVQPS---CASELSESVEAKPKEGPSRCSSCKKRVGLTGFNVAVVTILCVTSLFGQHNCPLTTHC 715
            PP  P LC N CGFFGS + MN+CSKCY+ +  ++DQ  +A +++ + +   S      S+ A      ++++ + +E  +++ +PS    A+E  E+  ++P    +RC SC K+VG+ GF        C ++  G H  P    C
Sbjct:   12 PPTEPKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLKLPSC-----SIIAPGQKHPLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCK-----CGSTFCGSHRYPEKHEC 148          
BLAST of FC932013 vs. ExPASy Swiss-Prot
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.148e-15
Identity = 54/148 (36.49%), Postives = 70/148 (47.30%), Query Frame = 2
Query:  275 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQ------DQAKLAASSIGSIVNETSSGNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFNVAVVTILCVTSLFG-QHNC 697
            +ETG   P E PILC+NNCGFFGS  T NMCSKCY+D +  +      ++  LA+ S   +V E + G GS SVA     ++                       E  PK   +RC SC+K+VGLTGF        C    +   H C
Sbjct:   11 EETGVHTP-EAPILCVNNCGFFGSRMTENMCSKCYRDTVKAKTVATVVEKKPLASLSSTPLVTEVTDG-GSGSVADGKQVME-----------------------EDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKC 133          
BLAST of FC932013 vs. ExPASy Swiss-Prot
Match: SAP3_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.064e-14
Identity = 50/145 (34.48%), Postives = 72/145 (49.66%), Query Frame = 2
Query:  308 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSGNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAK--------------PKEGPSRCSSCKKRVGLTGFNVAVVTILCVTSLFG-QHNC 697
            P LC NNCGFFGS AT N+CSKC++D+  ++  +  A  ++            ++S+AA  V   ASS     +S  P   ++  E VEAK              P + P RC +C++RVG+TGF      + C T  +  QH C
Sbjct:   10 PRLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHAL------------TQSLAA--VGAAASS----SVSPPPPPPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGITGFRCRCGFVFCGTHRYAEQHEC 136          
The following BLAST results are available for this feature:
BLAST of FC932013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
SAP8_ORYSJ6.850e-3855.10Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSI6.850e-3855.10Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ARATH2.603e-3750.33Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ORYSJ9.891e-3753.06Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ARATH4.616e-1836.05Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ARATH7.873e-1838.00Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ORYSJ3.308e-1636.57Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP7_ARATH9.625e-1631.29Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ORYSJ8.148e-1536.49Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP3_ARATH1.064e-1434.48Zinc finger A20 and AN1 domain-containing stress-a... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34203G02EF PostHarveN Citrus clementina cDNA clone C34203G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932013 ID=FC932013; Name=FC932013; organism=Citrus clementina; type=EST; length=742bp
GGAGAACCCGGAAAGGGAATCCAGGACGTCTCTCATCGGTTTTTGCCTGC
TCTCTCCCCGATAGGCCGATCTGGTCCATTTAATTTTAGGGGCTCATTGG
ATGCTGGCTTGAGCTCGGGGATCGGCTTAAGGGATTCATTGCTGTTTCTT
CTGTTGCTCGCAGACTGTGGCGTTCATGGTTGGTTGACTTTGCCATGTGG
TATGCATTATGACAAGATAGGAAGCCGTGATTGTAATCTATGGCTATTGT
TTGGGTGGTGAAAACATGGACCATGATGAGACTGGATGCCAAGCTCCTCC
TGAGGGCCCTATCTTGTGCATCAACAATTGTGGTTTCTTTGGAAGTGTGG
CTACTATGAATATGTGTTCCAAATGCTACAAGGACATAATGCTGAAACAG
GATCAAGCTAAGCTTGCTGCTTCATCTATTGGAAGCATTGTGAATGAAAC
GTCAAGCGGCAATGGAAGTGAATCTGTTGCTGCTGCCACTGTTGATGTGC
AAGCTAGTTCAGTGGAGCCAAAAATCATCTCTGTGCAGCCATCATGTGCT
TCAGAATTGAGCGAGAGTGTGGAGGCAAAGCCGAAGGAGGGTCCCAGCCG
GTGCAGCAGTTGCAAGAAGCGTGTTGGTTTAACAGGATTCAATGTCGCTG
TGGTAACTATACTGTGTGTCACATCGCTATTCGGACAACATAACTGCCCT
TTGACTACGCACTGCTGCTAGGGATGCTATAATTAAGCAACC
back to top