FC932166

Overview
NameFC932166
Unique NameFC932166
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length625
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig226 contig Ccv1_Contig226:4..628. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPK8_ARATH (Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana GN=CPK8 PE=1 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 1.753e-75
Identity = 145/185 (78.38%), Postives = 158/185 (85.41%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQN-IPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNSISLKLMREEGLQL 561
            KRAL+V+AE LSVEEVAG+KEAFEMMD+ K GKIN            Q  IP+ DLQILMEAADVDGDG+L YGEFVAVSVHLKKMANDEHLHKAFSFFD+N+S +IEIEELR ALNDEVDT+ E+V+ AIM DVDTDKDGRISYEEFA MMKAGTDWRKASRQYSRERFNS+SLKLMRE  LQL
Sbjct:  345 KRALRVIAEHLSVEEVAGIKEAFEMMDSKKTGKINLEELKFGLHKLGQQQIPDTDLQILMEAADVDGDGTLNYGEFVAVSVHLKKMANDEHLHKAFSFFDQNQSDYIEIEELREALNDEVDTNSEEVVAAIMQDVDTDKDGRISYEEFAAMMKAGTDWRKASRQYSRERFNSLSLKLMREGSLQL 529          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPK7_ARATH (Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=1 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.256e-73
Identity = 141/185 (76.22%), Postives = 155/185 (83.78%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVD-TSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNSISLKLMREEGLQL 561
            KRAL+V+AE LSVEE AG+KEAFEMMD NKRGKIN            Q I + DLQILMEA DVDGDG+L Y EFVAVSVHLKKMANDEHLHKAF+FFD+N+SG+IEI+ELR ALNDE+D TS E+VI AIM DVDTDKDGRISYEEF  MMKAGTDWRKASRQYSRERFNS+SLKLMR+  LQL
Sbjct:  347 KRALRVIAEHLSVEEAAGIKEAFEMMDVNKRGKINLEELKYGLQKAGQQIADTDLQILMEATDVDGDGTLNYSEFVAVSVHLKKMANDEHLHKAFNFFDQNQSGYIEIDELREALNDELDNTSSEEVIAAIMQDVDTDKDGRISYEEFVAMMKAGTDWRKASRQYSRERFNSLSLKLMRDGSLQL 531          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKW_ARATH (Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana GN=CPK32 PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 1.702e-62
Identity = 119/184 (64.67%), Postives = 147/184 (79.89%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNSISLKLMREEGLQL 561
            KRAL+V+AE LS EE +G++E F++MDT++RGKIN              IP+ DLQILM+A D+D DG L   EF+A+SVHL+KM NDEHL KAF+FFD+N +G+IEIEELR AL+DE+ TS E+V++AI+ DVDTDKDGRISYEEF  MMK GTDWRKASRQYSRERFNSISLKLM++  LQ+
Sbjct:  351 KRALRVIAEHLSDEEASGIREGFQIMDTSQRGKINIDELKIGLQKLGHAIPQDDLQILMDAGDIDRDGYLDCDEFIAISVHLRKMGNDEHLKKAFAFFDQNNNGYIEIEELREALSDELGTS-EEVVDAIIRDVDTDKDGRISYEEFVTMMKTGTDWRKASRQYSRERFNSISLKLMQDASLQV 533          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKE_ARATH (Calcium-dependent protein kinase 14 OS=Arabidopsis thaliana GN=CPK14 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 6.692e-59
Identity = 111/183 (60.66%), Postives = 143/183 (78.14%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNSISLKLMREEGLQ 558
            KRAL+V+AE LSVEE + +KE F++MDT+ RGKI               +P+ D+QILM+A DVD DG L   EFVA+SVH++K+ NDEHL KAF+FFD+N+SG+IEIEELR+AL D+VDT+ E+V+ AI+ DVDT+KDG+ISY+EFA MMK GTDWRKASRQYSR+ F  +SLKLM++  LQ
Sbjct:  342 KRALRVIAEHLSVEETSCIKERFQVMDTSNRGKITITELGIGLQKLGIVVPQDDIQILMDAGDVDKDGYLDVNEFVAISVHIRKLGNDEHLKKAFTFFDKNKSGYIEIEELRDALADDVDTTSEEVVEAIILDVDTNKDGKISYDEFATMMKTGTDWRKASRQYSRDLFKCLSLKLMQDGSLQ 524          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKU_ARATH (Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana GN=CPK30 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 7.923e-52
Identity = 100/184 (54.35%), Postives = 132/184 (71.74%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNSISLKLMREEGLQL 561
            K+AL+V+AE LS++EV  ++  F +MD +  GKI+              + E ++++LME ADV+G+G L YGEFVAV +HL+KM NDEH  +AF FFD++ SG+IE EELR AL DE+      VI  IM +VDTDKDG+I+Y+EF VMMKAGTDWRKASRQYSRERF S+SL LM++  + L
Sbjct:  347 KKALRVIAEHLSIQEVEVIRNMFTLMDDDNDGKISYLELRAGLRKVGSQLGEPEIKLLMEVADVNGNGCLDYGEFVAVIIHLQKMENDEHFRQAFMFFDKDGSGYIESEELREALTDELGEPDNSVIIDIMREVDTDKDGKINYDEFVVMMKAGTDWRKASRQYSRERFKSLSLNLMKDGSMHL 530          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKD_ARATH (Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana GN=CPK13 PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.144e-50
Identity = 100/186 (53.76%), Postives = 132/186 (70.97%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNSISLKLMREEGLQLAN 567
            ++AL+V+AEFLS EEV  +K  F  MDT+  G ++              + E+++Q+L+EA D  G G+L YGEFVAVS+HL+K+ANDEHL KAFS+FD++ +G+I  +EL +AL ++      DV N I  +VDTDKDGRISYEEFA MMK GTDWRKASR YSR RFNS+S+KLM++  L L N
Sbjct:  342 RKALRVIAEFLSTEEVEDIKVMFNKMDTDNDGIVSIEELKAGLRDFSTQLAESEVQMLIEAVDTKGKGTLDYGEFVAVSLHLQKVANDEHLRKAFSYFDKDGNGYILPQELCDALKEDGGDDCVDVANDIFQEVDTDKDGRISYEEFAAMMKTGTDWRKASRHYSRGRFNSLSIKLMKDGSLNLGN 527          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKA_ARATH (Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana GN=CPK10 PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.158e-49
Identity = 97/184 (52.72%), Postives = 129/184 (70.11%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNSISLKLMREEGLQL 561
            K+ L+V+AE LS++EV  +K  F +MD +K GKI               + E ++++LME ADVDG+G L YGEFVAV +HL+K+ NDE    AF FFD++ S +IE++ELR AL DE+      V++ IM +VDTDKDGRI+Y+EF  MMKAGTDWRKASRQYSRERF S+S+ LM++  L L
Sbjct:  351 KKVLRVIAEHLSIQEVEVIKNMFSLMDDDKDGKITYPELKAGLQKVGSQLGEPEIKMLMEVADVDGNGFLDYGEFVAVIIHLQKIENDELFKLAFMFFDKDGSTYIELDELREALADELGEPDASVLSDIMREVDTDKDGRINYDEFVTMMKAGTDWRKASRQYSRERFKSLSINLMKDGSLHL 534          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKO_ARATH (Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana GN=CPK24 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.555e-42
Identity = 85/183 (46.45%), Postives = 126/183 (68.85%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEV--DTSGEDV-INAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNSISLKLMREE 549
            K+ L++VA+ L  EE+A + + F+ MDT+K G +             Q +P+ D+++LM+AAD DG+G L+  EFV +S+HLK+M  DEHL +AF +FD+N +GFIE++EL+ AL D+     +G D  I  I  DVD +KDGRIS++EF  MMK+GTDW+ ASRQYSR   N++S+K+ +E+
Sbjct:  354 KKVLRIVADNLPNEEIAAIVQMFQTMDTDKNGHLTFEELRDGLKKIGQVVPDGDVKMLMDAADTDGNGMLSCDEFVTLSIHLKRMGCDEHLQEAFKYFDKNGNGFIELDELKVALCDDKLGHANGNDQWIKDIFFDVDLNKDGRISFDEFKAMMKSGTDWKMASRQYSRALLNALSIKMFKED 536          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPK3_ARATH (Calcium-dependent protein kinase 3 OS=Arabidopsis thaliana GN=CPK3 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.029e-31
Identity = 67/154 (43.51%), Postives = 101/154 (65.58%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 471
            K AL+V+AE LS EE+ GLKE F+ +DT+  G +               I EA+++ LMEAAD+DGDGS+ Y EF++ ++H+ ++  ++HL+ AF FFD + SG+I +EEL  A+  + +   +  I  I+ +VDTD+DG+I+YEEF  MMK G
Sbjct:  366 KMALKVIAENLSEEEIIGLKEMFKSLDTDNNGIVTLEELRTGLPKLGSKISEAEIRQLMEAADMDGDGSIDYLEFISATMHMNRIEREDHLYTAFQFFDNDNSGYITMEELELAMK-KYNMGDDKSIKEIIAEVDTDRDGKINYEEFVAMMKKG 518          
BLAST of FC932166 vs. ExPASy Swiss-Prot
Match: CDPKF_ARATH (Calcium-dependent protein kinase 15 OS=Arabidopsis thaliana GN=CPK15 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.461e-31
Identity = 69/154 (44.81%), Postives = 99/154 (64.29%), Query Frame = 1
Query:   10 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLTYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 471
            K AL+V+AE LS EE+ GLK  F  MDT+K G I               + EA+++ LMEAADVDG+G++ Y EF++ ++H  +   DEH+ KAF +FD++ SGFI ++EL +A+  E     E  I  ++ +VDTD DGRI+YEEF  MM++G
Sbjct:  389 KLALKVIAESLSEEEIKGLKTMFANMDTDKSGTITYEELKNGLAKLGSKLTEAEVKQLMEAADVDGNGTIDYIEFISATMHRYRFDRDEHVFKAFQYFDKDNSGFITMDELESAMK-EYGMGDEASIKEVIAEVDTDNDGRINYEEFCAMMRSG 541          
The following BLAST results are available for this feature:
BLAST of FC932166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
CDPK8_ARATH1.753e-7578.38Calcium-dependent protein kinase 8 OS=Arabidopsis ... [more]
CDPK7_ARATH1.256e-7376.22Calcium-dependent protein kinase 7 OS=Arabidopsis ... [more]
CDPKW_ARATH1.702e-6264.67Calcium-dependent protein kinase 32 OS=Arabidopsis... [more]
CDPKE_ARATH6.692e-5960.66Calcium-dependent protein kinase 14 OS=Arabidopsis... [more]
CDPKU_ARATH7.923e-5254.35Calcium-dependent protein kinase 30 OS=Arabidopsis... [more]
CDPKD_ARATH1.144e-5053.76Calcium-dependent protein kinase 13 OS=Arabidopsis... [more]
CDPKA_ARATH2.158e-4952.72Calcium-dependent protein kinase 10 OS=Arabidopsis... [more]
CDPKO_ARATH2.555e-4246.45Calcium-dependent protein kinase 24 OS=Arabidopsis... [more]
CDPK3_ARATH2.029e-3143.51Calcium-dependent protein kinase 3 OS=Arabidopsis ... [more]
CDPKF_ARATH3.461e-3144.81Calcium-dependent protein kinase 15 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionC34205D01EF PostHarveN Citrus clementina cDNA clone C34205D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932166 ID=FC932166; Name=FC932166; organism=Citrus clementina; type=EST; length=625bp
CAAGCTTAAAAAAGAGCTCTACAAGTTGTGGCTGAGTTTTTGTCTGTGGA
GGAAGTGGCTGGCTTAAAGGAGGCATTTGAGATGATGGACACTAACAAGA
GAGGCAAGATAAACCTTGAGGAGCTAAGGCTTGGGTTGCTAAAAGGTGGC
CAAAATATTCCTGAGGCAGATCTTCAAATCCTCATGGAAGCTGCCGATGT
TGATGGTGACGGAAGTTTGACTTATGGAGAGTTTGTCGCAGTTTCTGTTC
ACCTTAAAAAGATGGCCAATGATGAACATCTGCATAAAGCTTTTTCATTC
TTTGATCGAAATCGGAGTGGTTTCATAGAGATTGAAGAGCTGAGAAATGC
CTTAAATGATGAAGTTGACACCAGTGGTGAAGATGTTATCAATGCCATTA
TGCATGATGTTGATACGGACAAGGATGGTCGCATAAGTTACGAGGAGTTT
GCCGTGATGATGAAGGCAGGTACTGATTGGAGAAAGGCGTCAAGGCAATA
TTCACGGGAAAGATTCAACAGTATAAGCTTGAAGTTAATGAGGGAGGAGG
GTTTACAGTTAGCCAACTGAGGGTAAAAGAACTGAAAGTTATCCGACGGG
CTAGCATATCGAGAAATTCACTTCT
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