FC932170

Overview
NameFC932170
Unique NameFC932170
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length631
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932170 vs. ExPASy Swiss-Prot
Match: YAR1_YEAST (Ankyrin repeat-containing protein YAR1 OS=Saccharomyces cerevisiae GN=YAR1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.626e-18
Identity = 60/151 (39.74%), Postives = 82/151 (54.30%), Query Frame = 2
Query:  179 LSAEAVDDLIYDARAGDLEALNEDIANLASQH---SCNESQIVASAIDRTDESEGGSGSCVLHFPAANGNSDILKALLHKLSSADAAQRA-AFVNHRNNSGNTPLHWAALNAHLECVKALV-EAGADLDVKNDAGHDAVFLAERTAXAAVE 616
            L  E  D +I DARAGDL++L +    L S     +C ES+               S S  LH  AANG+ + ++ +L  +S A++A+   AFVN  N +GNT LHWA+LN  L+ VK L  E  AD  ++N  GHDA+F AE +    VE
Sbjct:    8 LDQEDQDTIILDARAGDLDSLKDIFTTLVSPELLSTCKESE---------------SDSTALHMAAANGHIETVRYILETVSRANSAEDLKAFVNEVNKTGNTALHWASLNGKLDVVKLLCDEYEADPFIRNKFGHDAIFEAENSGKEEVE 143          
BLAST of FC932170 vs. ExPASy Swiss-Prot
Match: YNW5_SCHPO (Ankyrin repeat-containing protein P16F5.05c OS=Schizosaccharomyces pombe GN=SPBP16F5.05c PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.649e-12
Identity = 47/122 (38.52%), Postives = 64/122 (52.46%), Query Frame = 2
Query:  194 VDDLIYDARAGDLEALNEDIANLASQHSCNESQIVASAIDRTDESEGGSGSCVLHFPAANGNSDILKALLHKLSSADAAQRAAFVNHRNNSGNTPLHWAALNAHLECVKALVEAGADLDVKN 559
            VDDLIY  RA D E L+E I     +            + R DE+ G SG   LH  +ANG+  +++ ++  L+          +N +N SGNT +HWAALN H E  K L+EAG D  +KN
Sbjct:    3 VDDLIYACRAADEELLDEIIEKCPQE------------LSRRDEN-GNSG---LHMASANGHIAVVQKIIPYLNKE-------VINAQNESGNTAMHWAALNGHAEICKLLLEAGGDPHIKN 101          
The following BLAST results are available for this feature:
BLAST of FC932170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
YAR1_YEAST2.626e-1839.74Ankyrin repeat-containing protein YAR1 OS=Saccharo... [more]
YNW5_SCHPO1.649e-1238.52Ankyrin repeat-containing protein P16F5.05c OS=Sch... [more]
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Properties
Property NameValue
Genbank descriptionC34205D05EF PostHarveN Citrus clementina cDNA clone C34205D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932170 ID=FC932170; Name=FC932170; organism=Citrus clementina; type=EST; length=631bp
GAGGATACTCCGCGGTAGAAAAGAAAGAACTGAAAAAACCAAAGCTACTT
AAATAACGTGGGATAGCATAAACAACCCCACCAAGGGAAAAAAAAGAAGA
AAAATCATACAACCTGGTTCATCACACATCATGTCCGCCCCCACAACATC
ACAGGCGAAGCCTACAGTGCCAATTGCACTTTCTGCAGAGGCAGTTGACG
ACTTGATCTATGACGCCCGAGCAGGCGACCTCGAGGCCCTTAATGAAGAC
ATCGCCAACCTCGCCAGCCAACACAGCTGCAACGAGTCCCAGATCGTGGC
ATCTGCCATCGATAGGACAGACGAGAGCGAAGGTGGCTCTGGATCTTGTG
TTCTGCACTTCCCTGCTGCGAATGGAAACTCTGATATCCTCAAGGCTCTC
CTCCACAAGCTGTCATCCGCAGACGCAGCCCAGCGTGCCGCGTTCGTGAA
CCACCGCAACAACTCCGGCAACACACCTCTCCACTGGGCTGCGCTTAACG
CGCACCTCGAGTGCGTTAAGGCGCTTGTCGAAGCTGGCGCAGATCTTGAT
GTTAAGAACGATGCTGGCCATGACGCTGTGTTCCTTGCCGAGCGGACAGC
GTGNGCTGCGGTGGAGGGCGACGAGGACGTT
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