FC932174

Overview
NameFC932174
Unique NameFC932174
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15461 contig Ccv1_Contig15461:1..658. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932174 vs. ExPASy Swiss-Prot
Match: CMBL_PONAB (Carboxymethylenebutenolidase homolog OS=Pongo abelii GN=CMBL PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.693e-13
Identity = 46/132 (34.85%), Postives = 78/132 (59.09%), Query Frame = 3
Query:  273 CELVNGVELS-IGEEAD-DAIQAYLFK-PVKNNNGTGLLLLSDIFGFQDSATRDFAYRVACNGYNVLVPDLFRG-DPWSKERPKAMFEEWLAKQDFERISKDIYTSTKWMVDEFMAAGIXKKLGIVGFCFGG 656
            C++ + +E   +G E   + I+AY+ K PV  + G  ++++ DIFG+Q   TR  A  ++ NGY  +VPD F G +PW      ++F EWL  ++ ++I ++I    K++  +  A    +K+GIVGFC+GG
Sbjct:   10 CDIGHRLEYGGLGREVQVEHIKAYVTKSPV--DAGKAVIVIQDIFGWQLPNTRYMADMISGNGYTTIVPDFFVGQEPWDPSGDWSIFPEWLKTRNAQKIDREISAILKYLKQQCHA----QKIGIVGFCWGG 135          
BLAST of FC932174 vs. ExPASy Swiss-Prot
Match: CMBL_HUMAN (Carboxymethylenebutenolidase homolog OS=Homo sapiens GN=CMBL PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.693e-13
Identity = 46/132 (34.85%), Postives = 78/132 (59.09%), Query Frame = 3
Query:  273 CELVNGVELS-IGEEAD-DAIQAYLFK-PVKNNNGTGLLLLSDIFGFQDSATRDFAYRVACNGYNVLVPDLFRG-DPWSKERPKAMFEEWLAKQDFERISKDIYTSTKWMVDEFMAAGIXKKLGIVGFCFGG 656
            C++ + +E   +G E   + I+AY+ K PV  + G  ++++ DIFG+Q   TR  A  ++ NGY  +VPD F G +PW      ++F EWL  ++ ++I ++I    K++  +  A    +K+GIVGFC+GG
Sbjct:   10 CDIGHRLEYGGLGREVQVEHIKAYVTKSPV--DAGKAVIVIQDIFGWQLPNTRYIADMISGNGYTTIVPDFFVGQEPWDPSGDWSIFPEWLKTRNAQKIDREISAILKYLKQQCHA----QKIGIVGFCWGG 135          
BLAST of FC932174 vs. ExPASy Swiss-Prot
Match: CMBL_RAT (Carboxymethylenebutenolidase homolog OS=Rattus norvegicus GN=Cmbl PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.783e-12
Identity = 43/121 (35.54%), Postives = 73/121 (60.33%), Query Frame = 3
Query:  303 IGEEAD-DAIQAYLFK-PVKNNNGTGLLLLSDIFGFQDSATRDFAYRVACNGYNVLVPDLFRG-DPWSKERPKAMFEEWLAKQDFERISKDIYTSTKWMVDEFMAAGIXKKLGIVGFCFGG 656
            +G+E   + I+AY+ + PV  + G  ++++ DIFG+Q S TR  A  +A NGY  +VPD F G +PW      + F EWL  ++  +I++++    +++  +  A    +K+GIVGFC+GG
Sbjct:   21 MGQEVQVEHIKAYVTRSPV--DAGKAVIVVQDIFGWQLSNTRYMADMIAGNGYTTIVPDFFVGQEPWDPAGDWSTFPEWLKSRNARKINREVDAVLRYLKQQCHA----QKIGIVGFCWGG 135          
BLAST of FC932174 vs. ExPASy Swiss-Prot
Match: CMBL_XENTR (Carboxymethylenebutenolidase homolog OS=Xenopus tropicalis GN=cmbl PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.042e-12
Identity = 40/131 (30.53%), Postives = 73/131 (55.73%), Query Frame = 3
Query:  273 CELVNGVELSI-GEEAD-DAIQAYLFKPVKNNNGTGLLLLSDIFGFQDSATRDFAYRVACNGYNVLVPDLFRG-DPWSKERPKAMFEEWLAKQDFERISKDIYTSTKWMVDEFMAAGIXKKLGIVGFCFGG 656
            C++ + +E    G+E   + I+AY+ KP  ++    ++++ DIFG+Q   TR  A  +  +GY  + PD F G +PW     ++ F EWL  +   ++ K+I    K++ ++       KK+G++GFC+GG
Sbjct:   10 CDIGDKIEYGAKGQEVQIEHIKAYVSKP-HSSTDKAVIVVQDIFGWQLPNTRFMADLLTAHGYITICPDFFVGQEPWKPSNDRSTFTEWLQTRQATKVEKEINVVLKYLKEQCHV----KKIGVIGFCWGG 135          
BLAST of FC932174 vs. ExPASy Swiss-Prot
Match: CMBL_MOUSE (Carboxymethylenebutenolidase homolog OS=Mus musculus GN=Cmbl PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.737e-11
Identity = 42/132 (31.82%), Postives = 76/132 (57.58%), Query Frame = 3
Query:  273 CELVNGVELS-IGEEAD-DAIQAYLFK-PVKNNNGTGLLLLSDIFGFQDSATRDFAYRVACNGYNVLVPDLFRG-DPWSKERPKAMFEEWLAKQDFERISKDIYTSTKWMVDEFMAAGIXKKLGIVGFCFGG 656
            C++ + +E   +G E   + I+AY+ + PV  + G  ++++ DIFG+Q   TR  A  +A NGY  +VPD F G +PW      + F  WL  ++  ++++++    +++  +  A    +K+GIVGFC+GG
Sbjct:   10 CDIGHKLEYGGMGHEVQVEHIKAYVTRSPV--DAGKAVIVVQDIFGWQLPNTRYMADMIARNGYTTIVPDFFVGQEPWDPAGDWSTFPAWLKSRNARKVNREVDAVLRYLRQQCHA----QKIGIVGFCWGG 135          
The following BLAST results are available for this feature:
BLAST of FC932174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CMBL_PONAB4.693e-1334.85Carboxymethylenebutenolidase homolog OS=Pongo abel... [more]
CMBL_HUMAN4.693e-1334.85Carboxymethylenebutenolidase homolog OS=Homo sapie... [more]
CMBL_RAT1.783e-1235.54Carboxymethylenebutenolidase homolog OS=Rattus nor... [more]
CMBL_XENTR3.042e-1230.53Carboxymethylenebutenolidase homolog OS=Xenopus tr... [more]
CMBL_MOUSE5.737e-1131.82Carboxymethylenebutenolidase homolog OS=Mus muscul... [more]
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Properties
Property NameValue
Genbank descriptionC34205D09EF PostHarveN Citrus clementina cDNA clone C34205D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932174 ID=FC932174; Name=FC932174; organism=Citrus clementina; type=EST; length=658bp
GGGAAAGTGAAGTGAATAAAATATCTGAAAGTCAACCTGCAAGCAGAGAC
ACAGAAATGGAGCTGGCAGCAGCCCCCTTATTTGCATCGTCGGCTTCAGT
TTTCAATAGCCCAGTTTGCCGTCTTCACTTGTTCTCCAGGAGCTCTGCTC
CTCTGCTTAGGAAGAGCGGTACAAATTTTCAAAGGCCATCATTTAGGAGG
AATCATAATGCAGTCTTCAAAGTATCTTGTAGTCTAGTGGAAGTGGAAGA
AGACGGCTTAGATGATGAAACTTGTGAGTTGGTTAATGGAGTTGAGCTTT
CCATTGGTGAGGAGGCTGACGACGCCATCCAAGCTTATCTTTTTAAACCT
GTCAAAAACAACAACGGAACCGGTTTGCTTCTGCTCTCTGATATTTTTGG
ATTTCAGGATTCAGCCACAAGAGATTTCGCATATCGTGTTGCTTGCAATG
GTTACAATGTTCTTGTTCCGGACTTATTTCGTGGGGATCCATGGTCAAAG
GAGCGACCAAAGGCTATGTTTGAAGAATGGTTAGCAAAGCAAGACTTTGA
GAGGATTTCAAAAGACATATACACTTCAACAAAATGGATGGTTGATGAAT
TTATGGCTGCAGGAATTTNCAAGAAGCTTGGTATAGTTGGGTTTTGTTTT
GGAGGTGG
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