FC932176

Overview
NameFC932176
Unique NameFC932176
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15112 contig Ccv1_Contig15112:207..899. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT1_ARATH (Adenine phosphoribosyltransferase 1 OS=Arabidopsis thaliana GN=APT1 PE=2 SV=2)

HSP 1 Score: 295.049 bits (754), Expect = 2.449e-79
Identity = 146/172 (84.88%), Postives = 162/172 (94.19%), Query Frame = 1
Query:    1 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 516
            DPRIA I+S+IRVIPDFPKPGIMFQDITTLLLDT+AF+DTI LFV+RYKDK ISVVAG+EARGFIFGPPIALAIGAKFVPMRKPKKLPG+VISEEYSLEYG D +EMHVGAV+ GERA+I+DDL+ATG TL+AAIRLLERVGV +VECACVIELPELKG+E+LGE  LFVLV
Sbjct:   68 DPRIAKIASSIRVIPDFPKPGIMFQDITTLLLDTEAFKDTIALFVDRYKDKGISVVAGVEARGFIFGPPIALAIGAKFVPMRKPKKLPGKVISEEYSLEYGTDTIEMHVGAVEPGERAIIIDDLIATGGTLAAAIRLLERVGVKIVECACVIELPELKGKEKLGETSLFVLV 239          
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT1_WHEAT (Adenine phosphoribosyltransferase 1 OS=Triticum aestivum GN=APT1 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.014e-74
Identity = 136/172 (79.07%), Postives = 155/172 (90.12%), Query Frame = 1
Query:    1 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 516
            D R+  I+S+IR IP+FPKPGI+FQDITTLLLD +AFRDT DLFVERYKDK+I+VVAG+EARGFIFGPPIALAIGAKFVP+RKPKKLPGEVISEEYSLEYG D +EMHVGAVQ  +R LIVDDL+ATG TL AA +L+ERVG  VVECACVIELPELKGR++LG+ P+FVLV
Sbjct:    4 DGRVERIASSIRAIPNFPKPGILFQDITTLLLDPQAFRDTTDLFVERYKDKDITVVAGVEARGFIFGPPIALAIGAKFVPIRKPKKLPGEVISEEYSLEYGTDKIEMHVGAVQPNDRVLIVDDLIATGGTLCAAAKLIERVGAKVVECACVIELPELKGRDKLGDMPVFVLV 175          
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT2_ARATH (Adenine phosphoribosyltransferase 2 OS=Arabidopsis thaliana GN=APT2 PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.180e-65
Identity = 125/172 (72.67%), Postives = 144/172 (83.72%), Query Frame = 1
Query:    1 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 516
            DPR+  IS AIRVIP FPK GIMFQDITTLLLD  AF+  +D+FV+RYK  NIS+VAG+EARGFIFGPPIALAIGAKFVP+RKP KLPG VISEEY LEYG+D +EM V AV++ ERALI+DDLVATG TLSA+I LLER G  VVECACV+ LP+ KG+ +L  KPL+VLV
Sbjct:   11 DPRLKAISDAIRVIPHFPKTGIMFQDITTLLLDPVAFKHVVDIFVDRYKHMNISLVAGVEARGFIFGPPIALAIGAKFVPLRKPGKLPGRVISEEYELEYGRDCLEMSVEAVKSEERALIIDDLVATGGTLSASINLLERAGAEVVECACVVGLPKFKGQCKLKGKPLYVLV 182          
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_LEPBL (Adenine phosphoribosyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=apt PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.893e-47
Identity = 90/168 (53.57%), Postives = 125/168 (74.40%), Query Frame = 1
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK---PLFVL 513
            + S IR IPD+PKPGI+F+DIT+LLLD +    TI  FV RY+DK I+ VAGIEARGF+ G P+A  +G  F+P+RK  KLP E +SEEY LEYGKDV+E+H  AVQ G++ L++DDL+ATG T+ AA++LL+++G  + E   +I+LP+L G ++L EK   P+F +
Sbjct:    4 VKSKIRTIPDYPKPGILFRDITSLLLDPEGLALTIGTFVNRYQDKGITKVAGIEARGFLTGAPLAFQLGVGFIPIRKKGKLPAETVSEEYDLEYGKDVIEIHKDAVQPGDKILLMDDLIATGGTMIAAVKLLKKLGAQIYEAGVIIDLPDLGGSKKLQEKLEVPVFAI 171          
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_LEPBJ (Adenine phosphoribosyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=apt PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.893e-47
Identity = 90/168 (53.57%), Postives = 125/168 (74.40%), Query Frame = 1
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK---PLFVL 513
            + S IR IPD+PKPGI+F+DIT+LLLD +    TI  FV RY+DK I+ VAGIEARGF+ G P+A  +G  F+P+RK  KLP E +SEEY LEYGKDV+E+H  AVQ G++ L++DDL+ATG T+ AA++LL+++G  + E   +I+LP+L G ++L EK   P+F +
Sbjct:    4 VKSKIRTIPDYPKPGILFRDITSLLLDPEGLALTIGTFVNRYQDKGITKVAGIEARGFLTGAPLAFQLGVGFIPIRKKGKLPAETVSEEYDLEYGKDVIEIHKDAVQPGDKILLMDDLIATGGTMIAAVKLLKKLGAQIYEAGVIIDLPDLGGSKKLQEKLEVPVFAI 171          
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_SHELP (Adenine phosphoribosyltransferase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=apt PE=3 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 5.507e-47
Identity = 89/169 (52.66%), Postives = 123/169 (72.78%), Query Frame = 1
Query:    7 RIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 513
            ++A I  +I+ IPD+PKPGIMF+D+T+L+ D  A++ TI LFVERYKD  ++ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D++E+H  A++ G++ L+VDDL+ATG T+ A ++L+ ++G  V   A VI LPEL G  RL E  L ++
Sbjct:    5 KLALIKQSIKTIPDYPKPGIMFRDVTSLMEDPAAYQATIALFVERYKDLGVTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRETISESYELEYGHDMLEIHTDAIKPGDKVLVVDDLLATGGTIEATVKLIRQLGGEVEHAAFVISLPELGGEHRLAEMGLSLM 173          
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_LEPIN (Adenine phosphoribosyltransferase OS=Leptospira interrogans GN=apt PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.569e-46
Identity = 85/160 (53.12%), Postives = 121/160 (75.62%), Query Frame = 1
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 498
            + S IR IPD+PKPGI+F+DIT+LLLD +    TI  FV RY+ K I+ VAGIEARGF+ G P+A  +G  F+P+RK  KLP E +SEEY LEYGKDV+E+H  ++Q G++ L++DDL+ATG T+ AA++LL+++G  + E   +I+LP+L GR++L E+
Sbjct:    4 VKSKIRTIPDYPKPGILFRDITSLLLDPEGLALTIGTFVNRYQGKGITKVAGIEARGFLTGAPLAFQLGVGFIPIRKKGKLPSETVSEEYDLEYGKDVIEVHKDSIQPGDKILLMDDLIATGGTMIAAVKLLKKLGAEIYEAGVIIDLPDLGGRKKLQEE 163          
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_LEPIC (Adenine phosphoribosyltransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=apt PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.569e-46
Identity = 85/160 (53.12%), Postives = 121/160 (75.62%), Query Frame = 1
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 498
            + S IR IPD+PKPGI+F+DIT+LLLD +    TI  FV RY+ K I+ VAGIEARGF+ G P+A  +G  F+P+RK  KLP E +SEEY LEYGKDV+E+H  ++Q G++ L++DDL+ATG T+ AA++LL+++G  + E   +I+LP+L GR++L E+
Sbjct:    4 VKSKIRTIPDYPKPGILFRDITSLLLDPEGLALTIGTFVNRYQGKGITKVAGIEARGFLTGAPLAFQLGVGFIPIRKKGKLPSETVSEEYDLEYGKDVIEVHKDSIQPGDKILLMDDLIATGGTMIAAVKLLKKLGAEIYEAGVIIDLPDLGGRKKLQEE 163          
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_PSYIN (Adenine phosphoribosyltransferase OS=Psychromonas ingrahamii (strain 37) GN=apt PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.022e-45
Identity = 92/162 (56.79%), Postives = 117/162 (72.22%), Query Frame = 1
Query:    4 PRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            P +  I + I+ IPD+P PGIMF+DIT+L+ +  AF  TI+L VERYKD+NIS V G EARGFIFG P+A AIGA FVP+RKP KLP   + E Y LEYG D + +H  A++  ER L+VDDL+ATG T  A+I+L+ R G  V+E A VIELP LKG ++L
Sbjct:    4 PTLEEIKNCIKSIPDYPIPGIMFRDITSLIENGAAFSATINLLVERYKDQNISKVVGTEARGFIFGAPLAAAIGAGFVPVRKPGKLPRTTVHENYELEYGTDSLHIHSDAIKKNERVLLVDDLLATGGTAEASIKLIHRSGGIVIESAFVIELPALKGAQKL 165          
BLAST of FC932176 vs. ExPASy Swiss-Prot
Match: APT_HAEIN (Adenine phosphoribosyltransferase OS=Haemophilus influenzae GN=apt PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.148e-44
Identity = 89/157 (56.69%), Postives = 117/157 (74.52%), Query Frame = 1
Query:   19 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGETLSAAIRLLERVGVHVVECACVIELPELKGRERL 489
            I S+I+ IP++PK GI+F+DITTLL    AF+ TIDL VE+Y+DK I+ V G E+RGFIFG P+ALA+G  F  +RKPKKLP E IS+ Y LEYG+D +EMHV A+  G+  LI+DDL+ATG T+ A ++L++R+G  V   A VI LPEL G +RL
Sbjct:    8 IKSSIKSIPNYPKEGIIFRDITTLLEVPAAFKATIDLIVEQYRDKGITKVLGTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGAVKHAAFVINLPELGGEKRL 164          
The following BLAST results are available for this feature:
BLAST of FC932176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT1_ARATH2.449e-7984.88Adenine phosphoribosyltransferase 1 OS=Arabidopsis... [more]
APT1_WHEAT9.014e-7479.07Adenine phosphoribosyltransferase 1 OS=Triticum ae... [more]
APT2_ARATH1.180e-6572.67Adenine phosphoribosyltransferase 2 OS=Arabidopsis... [more]
APT_LEPBL1.893e-4753.57Adenine phosphoribosyltransferase OS=Leptospira bo... [more]
APT_LEPBJ1.893e-4753.57Adenine phosphoribosyltransferase OS=Leptospira bo... [more]
APT_SHELP5.507e-4752.66Adenine phosphoribosyltransferase OS=Shewanella lo... [more]
APT_LEPIN3.569e-4653.13Adenine phosphoribosyltransferase OS=Leptospira in... [more]
APT_LEPIC3.569e-4653.13Adenine phosphoribosyltransferase OS=Leptospira in... [more]
APT_PSYIN3.022e-4556.79Adenine phosphoribosyltransferase OS=Psychromonas ... [more]
APT_HAEIN1.148e-4456.69Adenine phosphoribosyltransferase OS=Haemophilus i... [more]

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Properties
Property NameValue
Genbank descriptionC34205D11EF PostHarveN Citrus clementina cDNA clone C34205D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932176 ID=FC932176; Name=FC932176; organism=Citrus clementina; type=EST; length=693bp
GACCCTCGAATCGCTGGGATTTCCTCAGCAATTCGTGTCATCCCAGACTT
CCCTAAACCAGGGATTATGTTTCAAGATATCACAACATTGCTTCTTGATA
CCAAGGCTTTTAGAGATACTATTGATCTGTTCGTTGAGAGGTACAAGGAC
AAAAACATCTCTGTTGTTGCAGGTATTGAAGCTAGGGGTTTTATATTTGG
GCCTCCTATTGCATTGGCTATTGGGGCAAAGTTTGTTCCTATGAGGAAAC
CTAAGAAGCTTCCTGGGGAGGTTATTTCCGAAGAGTATTCCTTGGAATAT
GGAAAAGATGTAATGGAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCG
TGCTTTAATAGTAGACGATCTAGTTGCAACTGGTGAGACCTTGTCTGCTG
CAATCAGGCTACTTGAGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGC
GTGATTGAACTGCCAGAGCTAAAGGGTCGGGAACGGCTGGGAGAGAAACC
ACTATTTGTTCTTGTAAGCTAAACTTGACCTCAGGTTATGGTTTAAATGC
AATGTTTGTGGACCATATGGGTTTCTAGTCGCTCGGGCTCTGCTCAAAGC
TTGAGAACTTCATAAAACCATCTGGTAATATAAGAGCAGTTTCATTGGCT
TTTTATTTTATTTAGACGTTGGGGAAAGAGTGGTGGGGAAGCT
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