FC932178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_ANAVT (Tryptophan synthase alpha chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=trpA PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.161e-45 Identity = 89/148 (60.14%), Postives = 109/148 (73.65%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVL 657 +++ F LK+ + ALIP+ITAGD DL TTA ALK+LDS G+DIIELG+PYSDPLADGPVIQAAATR+L GT ++L MLK P + PI LFTYYN IL RG+DNF+ V G+ GLVVPD+PLEE L K A + I+L+L Sbjct: 4 ISDRFETLKQNQECALIPFITAGDPDLETTAAALKILDSNGADIIELGIPYSDPLADGPVIQAAATRALQNGTKLESVLEMLKVTTPSLQAPIVLFTYYNSILHRGIDNFLEQVAAAGVAGLVVPDLPLEEAAGLLKPATERGIDLIL 151
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_ACAM1 (Tryptophan synthase alpha chain OS=Acaryochloris marina (strain MBIC 11017) GN=trpA PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.341e-44 Identity = 86/148 (58.11%), Postives = 115/148 (77.70%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVL 657 +++ F +L+ +G+ ALIP++TAGD DL+TTA AL+ LD+ G+D+IELGVPYSDPLADGPVIQAAATR+L RGT + +L M+ E+ P+I PI LFTYYNPI RGV F+ + G+RGLVVPD+PLEE+E+L ++A IE+ L Sbjct: 4 VSDCFAQLRDRGQCALIPFLTAGDPDLATTASALRQLDASGADLIELGVPYSDPLADGPVIQAAATRALQRGTRLDQVLEMVTELSPEIRAPIILFTYYNPIYHRGVAEFLQQIAKAGVRGLVVPDLPLEESENLLQQAADLGIEVTL 151
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_CYAP8 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 8801) GN=trpA PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.812e-44 Identity = 88/148 (59.46%), Postives = 113/148 (76.35%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVL 657 +++ F L+ + + ALIP+ITAGD DL TTA+AL+LLD+ G+D+IELGVPYSDPLADGPVIQAAATR+L RG +L ++KEV P+I PI LFTYYNPI RGV+ F+ V+ G++GLVVPD+PLEE ESL K A + I + L Sbjct: 4 VSDCFQSLRDRRQCALIPFITAGDPDLETTAKALRLLDASGADLIELGVPYSDPLADGPVIQAAATRALGRGVKLEDVLGVVKEVSPEIKAPIILFTYYNPIFYRGVEAFLQQVKAAGVQGLVVPDLPLEEAESLLKPAHEVGIAVTL 151
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_MICAN (Tryptophan synthase alpha chain OS=Microcystis aeruginosa (strain NIES-843) GN=trpA PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.162e-43 Identity = 85/148 (57.43%), Postives = 109/148 (73.65%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVL 657 + E F L+ QG ALIP+ITAGD DLSTTA+AL++LD G+D+IELGVPYSDPLADGPVIQ+AATR+L RG +L ++K ++ PI LFTYYNPI RG+D F+ ++ G+ GLVVPD+PLEE ESL + A IE++L Sbjct: 4 VTECFRSLRSQGNCALIPFITAGDPDLSTTAQALRILDRAGADLIELGVPYSDPLADGPVIQSAATRALNRGVKLEDVLEIVKNAQGEVKAPIILFTYYNPIYHRGIDVFLDQIKAAGVSGLVVPDLPLEEAESLLQPAAAKGIEVIL 151
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_SYNP2 (Tryptophan synthase alpha chain OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=trpA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 7.532e-43 Identity = 82/148 (55.41%), Postives = 113/148 (76.35%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVL 657 ++E F LK+ G+ ALIP+ITAGD DL TT +ALK+LD+ G+D IELGVPYSDPLADGP IQAAATR+L+RG +L++++ V Q++ PI LFTYYNPI RG+D FM+ V G++GLV+PD+PLEE++ + A + ++L+L Sbjct: 4 VSERFRSLKQAGQCALIPFITAGDPDLETTEQALKILDAAGADFIELGVPYSDPLADGPTIQAAATRALSRGVTLEQVLAIVQRVHGQLTAPIILFTYYNPIFYRGIDAFMAQVAAAGVKGLVIPDLPLEESQMVLDAATSHGLDLIL 151
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_SYNY3 (Tryptophan synthase alpha chain OS=Synechocystis sp. (strain PCC 6803) GN=trpA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 9.837e-43 Identity = 81/148 (54.73%), Postives = 116/148 (78.38%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVL 657 +A F L+++G+ ALIP++TAGD DL+TTAEAL++LD G+D+IELGVPYSDPLADGPVIQAAATR+L +G + +L++++EV I+ PI LFTYYNPI +GV+ F+ ++ G++GLVVPD+PLEE++ L + + +EL+L Sbjct: 4 VAACFNALRQRGECALIPFLTAGDPDLATTAEALRILDRAGADLIELGVPYSDPLADGPVIQAAATRALQKGVKLDDVLAIVREVHQDIAAPIILFTYYNPIFYQGVEVFLDKIKAAGVKGLVVPDLPLEESDRLLEATAERGLELIL 151
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_TRIEI (Tryptophan synthase alpha chain OS=Trichodesmium erythraeum (strain IMS101) GN=trpA PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.285e-42 Identity = 87/151 (57.62%), Postives = 114/151 (75.50%), Query Frame = 1 Query: 208 VGLAETFTRLKKQG-KVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVL 657 + +++ F L+ + ALIP+ITAGD DL TTA+AL++LD G+++IELGVPYSDPLADGPVIQAAATRSL RGT ++L +++ V P++ PI LFTYYNPIL RGV+NF+ + D+G RGLVVPD+PLEE + L + A IEL L Sbjct: 2 ISVSDCFESLRNNSSQCALIPFITAGDPDLETTAKALEVLDRSGANMIELGVPYSDPLADGPVIQAAATRSLNRGTTLESVLEVVQTVSPKLRSPIILFTYYNPILYRGVENFLKKIYDVGARGLVVPDLPLEEADILLEPAKDIGIELTL 152
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_MAIZE (Indole-3-glycerol phosphate lyase, chloroplastic OS=Zea mays GN=BX1 PE=1 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 6.376e-42 Identity = 80/150 (53.33%), Postives = 108/150 (72.00%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFT 663 +++T L +GK A IPYITAGD DL+TTAEAL+LLD CG+D+IELGVP SDP DGP+IQA+ R+LA GT +A+L ML+EV P++SCP+ L +YY PI+ R ++ +++ G+ GL+VPD+P SL EA N +ELVL T Sbjct: 90 VSDTMAALMAKGKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLLSYYKPIMSRS----LAEMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLT 235
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_SYNP6 (Tryptophan synthase alpha chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=trpA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.423e-41 Identity = 83/148 (56.08%), Postives = 109/148 (73.65%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVL 657 +++ F L+ QG+ ALIP++TAGD DL TT +AL LD G+D+IELGVPYSDPLADGPVIQAAATR+L GT + +L++LK+V QI PI LFTY NPIL RG + F+ + G GLVVPD+PLEE++ L + A + I+L+L Sbjct: 4 ISDCFAALRSQGRCALIPFLTAGDPDLETTRQALLALDREGADLIELGVPYSDPLADGPVIQAAATRALQAGTRLDDVLALLKDVRSQIKAPIVLFTYCNPILNRGFEAFLDQIAAAGANGLVVPDLPLEESQRLSEVAAERGIDLIL 151
BLAST of FC932178 vs. ExPASy Swiss-Prot
Match: TRPA_SYNE7 (Tryptophan synthase alpha chain OS=Synechococcus elongatus (strain PCC 7942) GN=trpA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.423e-41 Identity = 83/148 (56.08%), Postives = 109/148 (73.65%), Query Frame = 1 Query: 214 LAETFTRLKKQGKVALIPYITAGDSDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVL 657 +++ F L+ QG+ ALIP++TAGD DL TT +AL LD G+D+IELGVPYSDPLADGPVIQAAATR+L GT + +L++LK+V QI PI LFTY NPIL RG + F+ + G GLVVPD+PLEE++ L + A + I+L+L Sbjct: 4 ISDCFAALRSQGRCALIPFLTAGDPDLETTRQALLALDREGADLIELGVPYSDPLADGPVIQAAATRALQAGTRLDDVLALLKDVRSQIKAPIVLFTYCNPILNRGFEAFLDQIAAAGANGLVVPDLPLEESQRLSEVAAERGIDLIL 151 The following BLAST results are available for this feature:
BLAST of FC932178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932178 ID=FC932178; Name=FC932178; organism=Citrus clementina; type=EST; length=664bpback to top |