FC932184
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932184 vs. ExPASy Swiss-Prot
Match: NADC_RHORU (Probable nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Rhodospirillum rubrum GN=nadC PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.282e-18 Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = 1 Query: 295 PSHPT-----YDLKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGNSTLTRAMAD-LAHP-ATILETRKTAP 702 P+HP + + V+ ALAED G GD+T ATIP A F+A++ GI+AG+ A F +D ++ L+DG + G +V+G A +I+ AER LNF+ +SG +T TR D +AH A + TRKT P Sbjct: 3 PNHPVAALSPFAIDEAVRRALAEDLGRAGDITSTATIPAATRAHARFVARQPGILAGLGCARSAFALLDDTVTFTTPLEDGAEIAAGQTVAEVAGAARTILAAERTALNFLGHLSGIATRTRRFGDAIAHTRARLTCTRKTTP 145
BLAST of FC932184 vs. ExPASy Swiss-Prot
Match: NADC_PSEAE (Nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Pseudomonas aeruginosa GN=nadC PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.167e-15 Identity = 52/143 (36.36%), Postives = 77/143 (53.85%), Query Frame = 1 Query: 292 LPSHPTYDLKGV----VKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGNSTLTRAMADLAHPATI--LETRKTAP 702 +P+ DL+G V+ ALAED G GD+T P E EA + +E IAG A + +F +VDP + V W ++DG V ++ G A +++ ER LNF+Q +SG +T ++ ADL + L+TRKT P Sbjct: 1 MPNLTLADLQGEIQANVRTALAEDVGG-GDLTAQLIDP-QREAEARVITREHATIAGRAWVDEVFRQVDPRVLVTWQVEDGQRVEPNQMLFQLKGPARALLTGERSALNFLQLLSGTATRSQHYADLVAGTAVKLLDTRKTLP 141
BLAST of FC932184 vs. ExPASy Swiss-Prot
Match: NADC_SYNY3 (Probable nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Synechocystis sp. (strain PCC 6803) GN=nadC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 46/125 (36.80%), Postives = 72/125 (57.60%), Query Frame = 1 Query: 340 LAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGNSTLTR----AMADLAHPATILETRKTAP 702 LAED G RGD + + L +A ++AKE+G+IAG+ +A IF +DPS++ + +G V ++G S++ ERV LN + +SG +T+TR A+AD +P ++TRKT P Sbjct: 29 LAEDIG-RGDWSTQG-LGLQHRGQARWVAKENGVIAGLPMAARIFQLLDPSMEFQVLAGEGQAVTASTVVATMAGNLGSLLTGERVALNLVMGLSGIATMTRQYVQAIAD--YPTRFVDTRKTTP 149
BLAST of FC932184 vs. ExPASy Swiss-Prot
Match: NADC_BACSU (Probable nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Bacillus subtilis GN=nadC PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 47/131 (35.88%), Postives = 71/131 (54.20%), Query Frame = 1 Query: 316 LKGVVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGNSTLTRAMADLA--HPATILETRKTAP 702 LK ++ ED G GD+T + + EA +AK +GI AG A+ + F +D +++ KDGD +HKG ++ G A +++ ERVVLN +QR+SG +T+TR I +TRKT P Sbjct: 6 LKKLLNHFFLEDIGT-GDLTSQSIFG-EQSCEAEIVAKSEGIFAGAAIIKEGFSLLDENVQSILHKKDGDMLHKGEVIAELHGPAAALLSGERVVLNLIQRLSGIATMTREAVRCLDDEQIKICDTRKTTP 134
BLAST of FC932184 vs. ExPASy Swiss-Prot
Match: NADC_METTH (Probable nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Methanobacterium thermoautotrophicum GN=nadC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 45/130 (34.62%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 325 VVKLALAEDAGDRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGNSTLTRAMADLAHPAT----ILETRKTAP 702 +++ + D G D+T A I V A +++E+G++AG+ +AEM+ E S+ + W DGD + G + + G A I++ ER +LN M +MSG +TLTR+M A I TRKT P Sbjct: 4 IIREMIRADVGFE-DITTEALIDRGTRVVADIVSREEGVVAGVEVAEMMAREFSISI-IRWK-DDGDPLSGGERVLTLEGDAMDILMVERTMLNLMMKMSGIATLTRSMLQRARAVNEGIRIAATRKTTP 130
BLAST of FC932184 vs. ExPASy Swiss-Prot
Match: NADC_SALTY (Nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Salmonella typhimurium GN=nadC PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 5.076e-11 Identity = 44/136 (32.35%), Postives = 70/136 (51.47%), Query Frame = 1 Query: 313 DLKGVVKLALAEDAG---DRGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEV-DPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSG-NSTLTRAMADLAHPAT-ILETRKTAP 702 D+ V AL ED G D G+ +P D + A + +EDG+ G E +F ++ +++ W + DGD +H +++G A ++ ER LNF+Q +SG S + R + LA T +L+TRKT P Sbjct: 22 DIPAAVAQALREDLGGEVDAGNDITAQLLPADTQAHATVITREDGVFCGKRWVEEVFIQLAGDDVRLTWHVDDGDAIHANQTVFELNGPARVLLTGERTALNFVQTLSGVASEVRRYVGLLAGTQTQLLDTRKTLP 157 The following BLAST results are available for this feature:
BLAST of FC932184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932184 ID=FC932184; Name=FC932184; organism=Citrus clementina; type=EST; length=710bpback to top |