FC932191
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932191 vs. ExPASy Swiss-Prot
Match: SND1_DANRE (Staphylococcal nuclease domain-containing protein 1 OS=Danio rerio GN=snd1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.425e-15 Identity = 56/159 (35.22%), Postives = 83/159 (52.20%), Query Frame = 1 Query: 1 IWENYVE--GEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGD-QKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLS--STPPLAQLCSLAYIKIPALED 462 +W NY E EEV+ + + + EI G FY Q V K+ ++ + + + PV G+F P++GE +A+F AD W RA + EKVES K VFYIDYGN+E++ +L + P+ S + PP A + AYI++P ED Sbjct: 660 LWANYEEKPNEEVAQVTEAKERGRNTDPSTSLEITDGLHFYAQDVETGTKLENLMESMRGEIAAQPPVEGSFAPRRGEFCIAKF-ADGEWYRARV-----EKVESPA-KVHVFYIDYGNREVLSSTRLAALPPAFSTRTLPPQATEYAFAYIQVPQDED 811
BLAST of FC932191 vs. ExPASy Swiss-Prot
Match: TDRD1_HUMAN (Tudor domain-containing protein 1 OS=Homo sapiens GN=TDRD1 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.212e-13 Identity = 48/133 (36.09%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 58 KQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVIGA-FNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPA 453 K+ +K VTE G FYVQ + + + Q ASL A V + P KGE+ +A+++ D +WNRA+I N V+ K V YIDYGN+E++P N++ ++ ++ PP A C +A + IPA Sbjct: 261 KKTMEIKGTVTEFKHPGDFYVQLYSSEVLEYMNQLSASLKETYANVHEKDYIPVKGEVCIAKYTVDQTWNRAIIQN-----VDVQQKKAHVLYIDYGNEEIIPLNRIYHLNRNIDLFPPCAIKCFVANV-IPA 387
BLAST of FC932191 vs. ExPASy Swiss-Prot
Match: SND1_RAT (Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus GN=Snd1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.212e-13 Identity = 56/159 (35.22%), Postives = 82/159 (51.57%), Query Frame = 1 Query: 1 IWENYVEG--EEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGD-QKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSS--TPPLAQLCSLAYIKIPALED 462 +W +Y E EEV + + V VTEI FYVQ V ++ + + + S PV GA+ P++GE +A+F D W RA + EKVES K VFYIDYGN+E++P +L + P+ S+ P A + A+I++P ED Sbjct: 656 VWAHYEEQPVEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRSDISSHPPVEGAYAPRRGEFCIAKF-VDGEWYRARV-----EKVESPA-KVHVFYIDYGNREILPSTRLGALPPAFSTRVLPAQATEYAFAFIQVPQDED 807
BLAST of FC932191 vs. ExPASy Swiss-Prot
Match: TDRD1_MOUSE (Tudor domain-containing protein 1 OS=Mus musculus GN=Tdrd1 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.013e-13 Identity = 45/144 (31.25%), Postives = 74/144 (51.39%), Query Frame = 1 Query: 58 KQKEVLKVVVTEILGGGKFYVQQVGDQKVASVQQQLASLNLQEAPVI--GAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPALEDEYGPEAA 483 K+ +K VTE FY+Q + + ++ Q SL A V+ + P KGE+ +A+++ D +WNRA++ + V+ + K V YIDYGN+E++P + + P+ L PP A C ++ + A E G AA Sbjct: 255 KKTMEIKGTVTEFKHPSNFYIQLYSSEVLENMNQLSTSLKETYANVVPEDGYLPVKGEVCVAKYTVDQTWNRAIV-----QAVDVLQRKAHVLYIDYGNEEMIPIDSVHPLSRGLDLFPPSAIKCCVSGVIPTAGEWSEGCVAA 393
BLAST of FC932191 vs. ExPASy Swiss-Prot
Match: SND1_MOUSE (Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus GN=Snd1 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.013e-13 Identity = 54/159 (33.96%), Postives = 82/159 (51.57%), Query Frame = 1 Query: 1 IWENYVEG--EEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGD-QKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSS--TPPLAQLCSLAYIKIPALED 462 +W +Y E EEV + + V VTEI FYVQ V ++ + + + + PV G++ P++GE +A+F D W RA + EKVES K VFYIDYGN+E++P +L + P+ S+ P A + A+I++P ED Sbjct: 657 VWAHYEERPVEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDISSHPPVEGSYAPRRGEFCIAKF-VDGEWYRARV-----EKVESPA-KVHVFYIDYGNREILPSTRLGTLPPAFSTRVLPAQATEYAFAFIQVPQDED 808
BLAST of FC932191 vs. ExPASy Swiss-Prot
Match: SND1_HUMAN (Staphylococcal nuclease domain-containing protein 1 OS=Homo sapiens GN=SND1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.854e-13 Identity = 53/159 (33.33%), Postives = 82/159 (51.57%), Query Frame = 1 Query: 1 IWENYVEG--EEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGD-QKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSS--TPPLAQLCSLAYIKIPALED 462 +W +Y E EEV + + V VTEI FYVQ V ++ + + + + PV G++ P++GE +A+F D W RA + EKVES K VFYIDYGN+E++P +L + P+ S+ P A + A+I++P +D Sbjct: 657 VWAHYEEQPVEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIASHPPVEGSYAPRRGEFCIAKF-VDGEWYRARV-----EKVESPA-KIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQATEYAFAFIQVPQDDD 808
BLAST of FC932191 vs. ExPASy Swiss-Prot
Match: SND1_BOVIN (Staphylococcal nuclease domain-containing protein 1 OS=Bos taurus GN=SND1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.854e-13 Identity = 53/159 (33.33%), Postives = 82/159 (51.57%), Query Frame = 1 Query: 1 IWENYVEGEEVSNGAAVEGKQKEVL--KVVVTEILGGGKFYVQQVGD-QKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSS--TPPLAQLCSLAYIKIPALED 462 +W +Y E +E K++ V VTEI FYVQ V ++ + + + + PV G++ P++GE +A+F D W RA + EKVES K VFYIDYGN+E++P +L + P+ S+ P A + A+I++P ED Sbjct: 657 VWAHYEEQPVEELMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIASHPPVEGSYAPRRGEFCIAKF-VDGEWYRARV-----EKVESPA-KVHVFYIDYGNREILPSTRLGTLPPAFSTRVLPAQATEYAFAFIQVPQDED 808
BLAST of FC932191 vs. ExPASy Swiss-Prot
Match: SND1_PONAB (Staphylococcal nuclease domain-containing protein 1 OS=Pongo abelii GN=SND1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.026e-12 Identity = 53/159 (33.33%), Postives = 82/159 (51.57%), Query Frame = 1 Query: 1 IWENYVEG--EEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQQVGD-QKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSS--TPPLAQLCSLAYIKIPALED 462 +W +Y E EEV + + V VTEI FYVQ V ++ + + + + PV G++ P++GE +A+F D W RA + EKVES K VFYIDYGN+E++P +L + P+ S+ P A + A+I++P +D Sbjct: 657 VWAHYEEQPVEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQDVETGTQLEKLMENMRNDIASHPPVEGSYAPRRGEFCIAKF-VDGEWYRARV-----EKVESPA-KIHVFYIDYGNREVLPSTRLGTLPPAFSTRVLPAQATEYAFAFIQVPQDDD 808 The following BLAST results are available for this feature:
BLAST of FC932191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932191 ID=FC932191; Name=FC932191; organism=Citrus clementina; type=EST; length=648bpback to top |