FC932209
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932209 vs. ExPASy Swiss-Prot
Match: AB5F_ARATH (ABC transporter F family member 5 OS=Arabidopsis thaliana GN=ABCF5 PE=2 SV=1) HSP 1 Score: 353.214 bits (905), Expect = 7.866e-97 Identity = 182/235 (77.45%), Postives = 194/235 (82.55%), Query Frame = 2 Query: 5 KQSNTGASSISSGVKLENISKSYKGVTVLKDVTWEXXXXXXXXXXXXXXAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKIXXXXXXXXXXXVPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFL 709 K S GAS ISSGVKLENI KSYKGVTVLKDVTWE AGKTTQLRII GQEEPDSGNVIKAK NMK+AFLSQEFEVSMS+TVREEFM+AFKEEMEI KLE+VQKA+E +VDD+DLMGRLLDEFDLLQR+AQAVNLD++DAK+SKLMPELGF +D DRLVASFS GWQMRMSLGKI PTNHLDLDTIEWLEGYL KQDVPMVIISHDRAFL Sbjct: 85 KSSKNGASGISSGVKLENIRKSYKGVTVLKDVTWEVKRGEKVGLVGVNGAGKTTQLRIITGQEEPDSGNVIKAKPNMKVAFLSQEFEVSMSKTVREEFMTAFKEEMEITEKLEKVQKAIEGSVDDLDLMGRLLDEFDLLQRRAQAVNLDSVDAKISKLMPELGFAPEDADRLVASFSGGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLQKQDVPMVIISHDRAFL 319
BLAST of FC932209 vs. ExPASy Swiss-Prot
Match: AB2F_ARATH (ABC transporter F family member 2 OS=Arabidopsis thaliana GN=ABCF2 PE=3 SV=2) HSP 1 Score: 339.347 bits (869), Expect = 1.175e-92 Identity = 174/236 (73.73%), Postives = 194/236 (82.20%), Query Frame = 2 Query: 2 NKQSNTGASSISSGVKLENISKSYKGVTVLKDVTWEXXXXXXXXXXXXXXAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKIXXXXXXXXXXXVPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFL 709 +KQSN GASSISSGV+LENISKSY+G+TVLKDVTWE AGKTTQLRII GQEEPDSGNVI AK N+K+AFLSQEFEVSM +TV+EEFM FKEEMEIA KLE +QKA+E AVDD++LMG+LLDEFDLLQR+AQ V+LD++ AK+SKLM ELGF ++D DRLVASFSSGWQMRMSLGKI PTNHLDLDTIEWLEGYL KQDVPMVIISHDRAFL Sbjct: 70 SKQSNNGASSISSGVRLENISKSYEGITVLKDVTWEVKKGEKVGLIGVNGAGKTTQLRIITGQEEPDSGNVIWAKPNLKVAFLSQEFEVSMGKTVKEEFMCTFKEEMEIARKLENLQKAIEEAVDDLELMGKLLDEFDLLQRRAQEVDLDSIHAKISKLMSELGFVSEDADRLVASFSSGWQMRMSLGKILLQNPDLLLLDEPTNHLDLDTIEWLEGYLIKQDVPMVIISHDRAFL 305
BLAST of FC932209 vs. ExPASy Swiss-Prot
Match: YDIF_BACSU (Uncharacterized ABC transporter ATP-binding protein ydiF OS=Bacillus subtilis GN=ydiF PE=3 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.282e-22 Identity = 65/222 (29.28%), Postives = 115/222 (51.80%), Query Frame = 2 Query: 44 VKLENISKSYKGVTVLKDVTWEXXXXXXXXXXXXXXAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKIXXXXXXXXXXXVPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFL 709 +++ +SKS+ T+L ++ E AGK+T L+IIAGQ + G +IK K ++ + +L+Q + T++EE ++ F + ++ +++ + +A D + ++ +D LQ++ + +A V ++ LGF+ D V S S G + R++LGK+ PTNHLD+DT+ WLE YL ++I+SHDR FL Sbjct: 4 LQVNQLSKSFGADTILNNIKLEVRNRDRIAIVGRNGAGKSTLLKIIAGQLSYEKGEIIKPK-DITMGYLAQHTGLDSKLTIKEELLTVFDHLKAMEKEMRAMEEKMAAA--DPGELESIMKTYDRLQQEFKDKGGYQYEADVRSVLHGLGFSHFDDSTQVQSLSGGQKTRLALGKLLLTQPDLLILDEPTNHLDIDTLTWLEHYLQGYSGAILIVSHDRYFL 222
BLAST of FC932209 vs. ExPASy Swiss-Prot
Match: AB4F_ARATH (ABC transporter F family member 4 OS=Arabidopsis thaliana GN=ABCF4 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.733e-19 Identity = 68/229 (29.69%), Postives = 110/229 (48.03%), Query Frame = 2 Query: 44 VKLENISKSYKGVTVLKDVTWEXXXXXXXXXXXXXXAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESA-------VDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKIXXXXXXXXXXXVPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFL 709 + +E+ S S +G +LK+ + GK+T L+++A ++ P N+ + + QE V ++ +SA +E +++ + E +QK+ A DD D +L + +D LQ + D +A+ SK++ LGFT D R SFS GW+MR+SL + PTNHLDL + WLE YL + +V++SHDR FL Sbjct: 163 ITIESFSVSARGKELLKNASVRISHGKRYGLIGPNGMGKSTLLKLLAWRKIP-------VPKNIDVLLVEQEV-VGDEKSALNAVVSANEELVKLREEAEALQKSSSGADGENVDGEDDDDTGEKLAELYDRLQ----ILGSDAAEAQASKILAGLGFTKDMQVRATQSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFL 379
BLAST of FC932209 vs. ExPASy Swiss-Prot
Match: YFMR_BACSU (Uncharacterized ABC transporter ATP-binding protein yfmR OS=Bacillus subtilis GN=yfmR PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.051e-17 Identity = 62/222 (27.93%), Postives = 103/222 (46.40%), Query Frame = 2 Query: 44 VKLENISKSYKGVTVLKDVTWEXXXXXXXXXXXXXXAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKIXXXXXXXXXXXVPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFL 709 +K EN+ K+Y T+ +++ GK+T L++IAG E + G + K+ S +++ FL Q+ E+ +TV E S M+ + E+ L ++ LL Q K A N + ++ +LG +D + V S G + R+++ K PTNHLD +TIEWLEGYL + +++++HDR FL Sbjct: 4 LKAENLYKTYGDKTLFDHISFHIEENERIGLIGPNGTGKSTLLKVIAGLESIEEGEITKSGS-VQVEFLHQDPELPAGQTVLEHIYSGESAVMKTLREYEKALYELGKDPENEQRQKHLL----AAQAKMDANNAWDANTLAKTVLSKLG--VNDVTKPVNELSGGQKKRVAIAKNLIQPADLLILDEPTNHLDNETIEWLEGYLSQYPGAVMLVTHDRYFL 218
BLAST of FC932209 vs. ExPASy Swiss-Prot
Match: YFMM_BACSU (Uncharacterized ABC transporter ATP-binding protein yfmM OS=Bacillus subtilis GN=yfmM PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.218e-16 Identity = 55/222 (24.77%), Postives = 105/222 (47.30%), Query Frame = 2 Query: 44 VKLENISKSYKGVTVLKDVTWEXXXXXXXXXXXXXXAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKIXXXXXXXXXXXVPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFL 709 + ++++S + + +V++ GK+T + II G+ EPD G V +K N+++ +L Q + +++R+ AF + ++ + + A D D + +LL+E ++Q + +D+KV ++ LG + +R V S G + ++ L K+ PTN+LD IEWL+ YL + + ++ISHD FL Sbjct: 4 LSVKDLSHGFGDRAIFNNVSFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKVEWSK-NVRVGYLDQHTVLEKGKSIRDVLKDAFHYLFAMEEEMNEIYNKMGEA--DPDELEKLLEEVGVIQDALTNNDFYVIDSKVEEIARGLGLSDIGLERDVTDLSGGQRTKVLLAKLLLEKPEILLLDEPTNYLDEQHIEWLKRYLQEYENAFILISHDIPFL 222
BLAST of FC932209 vs. ExPASy Swiss-Prot
Match: TLRC_STRFR (Tylosin resistance ATP-binding protein tlrC OS=Streptomyces fradiae GN=tlrC PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.418e-15 Identity = 63/228 (27.63%), Postives = 97/228 (42.54%), Query Frame = 2 Query: 26 SSISSGVKLENISKSYKGVTVLKDVTWEXXXXXXXXXXXXXXAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKIXXXXXXXXXXXVPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFL 709 +S SS + L ++K Y VL V+ AGK+T LR++AG+E PD+G V + +L Q + TV++ A E + +L R + AL A D L L + L + + + DA+V + LG DR + + S G + R++L PTN LD + WLE +L +V ++HDR FL Sbjct: 3 TSPSSQLSLHGVTKRYDDRVVLSQVSLAISPGEKAGIIGDNGAGKSTLLRLLAGEERPDAGEVTVIAPG-GVGYLPQTLGLPPRATVQDAIDLAMTELRVLEAELRRTEAALAEAATDEALQDALT-AYARLTEQYEVRDGYGADARVDAALHGLGLPGLPRDRRLGTLSGGERSRLALAATLASQPELLLLDEPTNDLDDRAVHWLEEHLSGHRGTVVTVTHDRVFL 228
BLAST of FC932209 vs. ExPASy Swiss-Prot
Match: ABCF2_DICDI (ABC transporter F family member 2 OS=Dictyostelium discoideum GN=abcF2 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15 Identity = 66/227 (29.07%), Postives = 103/227 (45.37%), Query Frame = 2 Query: 35 SSGVKLENISKSYKGVTVLKDVTWEXXXXXXXXXXXXXXAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLD--TLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKIXXXXXXXXXXXVPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFL 709 S VK+E ++ ++ G +L D T E GK+T + +A +E P ++ I LS+E S RT + + ++E++ LE ++ LE + + L D ++ L+ NLD T + S+++ LGFT+ + S GW+MR+SL K PTNHLDL WLE YL D ++IISH + FL Sbjct: 50 SRDVKIEQVTLTFHGKELLSDTTVEINFGRRYGLIGQNGCGKSTFFQCLAVRELP-------IPEHIDIFHLSEEAHPS-ERTALQSVIDDAEKEVKRLEVLE--ERLLEEQGPESE---ELFDVYERLE------NLDPTTFVPRASEILIGLGFTSQTMLKKTKDLSGGWRMRVSLAKALFIKPTLLLLDEPTNHLDLGACVWLEDYLANYDRSLIIISHSQDFL 257
BLAST of FC932209 vs. ExPASy Swiss-Prot
Match: YBP8_SCHPO (Uncharacterized ABC transporter ATP-binding protein C16H5.08c OS=Schizosaccharomyces pombe GN=SPBC16H5.08c PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14 Identity = 58/228 (25.44%), Postives = 105/228 (46.05%), Query Frame = 2 Query: 32 ISSGVKLENISKSYKGVTVLKDVTWEXXXXXXXXXXXXXXAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMD--LMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKIXXXXXXXXXXXVPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFL 709 +S +K+++ + S+ G ++++ T E +GK+T L +A ++ ++ ++ L+ E E S V SA + ++ ++E + S DD+D L+ +E D ++ T +AK + ++ LGFT + + S GW+MR++L + PTNHLDL+ + WLE YL K D +V+ SH + FL Sbjct: 72 MSRDIKIDSYTLSFHGRLLIENATIELNHGQRYGLLGDNGSGKSTFLESVAARD-------VEYPEHIDSYLLNAEAEPSDVNAVDYIIQSAKDKVQKLEAEIEEL-----STADDVDDVLLESKYEELD-------DMDPSTFEAKAAMILHGLGFTQEMMAKPTKDMSGGWRMRVALSRALFIKPSLLLLDEPTNHLDLEAVVWLENYLAKYDKILVVTSHSQDFL 280
BLAST of FC932209 vs. ExPASy Swiss-Prot
Match: UUP_ECOLI (ABC transporter ATP-binding protein uup OS=Escherichia coli (strain K12) GN=uup PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14 Identity = 49/186 (26.34%), Postives = 99/186 (53.23%), Query Frame = 2 Query: 152 AGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALESAVDDMDLMGRLLDEFDLLQRKAQAVNLDTLDAKVSKLMPELGFTADDGDRLVASFSSGWQMRMSLGKIXXXXXXXXXXXVPTNHLDLDTIEWLEGYLGKQDVPMVIISHDRAFL 709 AGK+T ++I+ ++ D G +I + ++ +A L Q+ ++ +V + +E+ E + + + + + D + L+E +Q + NL L+ ++++++ +LG D + ++S S GW + +LG+ PTNHLD++TI+WLEG+L + ++ ISHDR+F+ Sbjct: 40 AGKSTLMKILNREQGLDDGRIIY-EQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYHDISRLVMN-----DPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQLGL---DPNVALSSLSGGWLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFI 216 The following BLAST results are available for this feature:
BLAST of FC932209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932209 ID=FC932209; Name=FC932209; organism=Citrus clementina; type=EST; length=713bpback to top |