FC932211

Overview
NameFC932211
Unique NameFC932211
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length630
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15473 contig Ccv1_Contig15473:1..630. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932211 vs. ExPASy Swiss-Prot
Match: BCAT2_ARATH (Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.175e-57
Identity = 108/161 (67.08%), Postives = 132/161 (81.99%), Query Frame = 2
Query:  155 FCRHTSQAAASLQQVCEPSAYS--DDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLILFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGP 628
            F ++ +QAA++L++  +   Y   DD  AD +DWDNLGFGL PADYMY MKCS D  F +G LS YG I+LSPS+GVLNYGQ ++EG KAYRKE+G+L+LFRPD NA R++ GAERM MPSPS+DQF++AVKQTALANKRWVPP GKG+LYIRPLL+GSGP
Sbjct:   26 FAKYNAQAASALREERKKPLYQNGDDVYAD-LDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKGTLYIRPLLMGSGP 185          
BLAST of FC932211 vs. ExPASy Swiss-Prot
Match: BCAT1_ARATH (Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 6.130e-52
Identity = 102/178 (57.30%), Postives = 128/178 (71.91%), Query Frame = 2
Query:   95 CLRNFSQSLRVGSAFLKSGDFCRHTSQAAASLQQVCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMK-CSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLILFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSG 625
            CL  +S +    S   K   F  H ++AAAS+ +     A  +DE    +DWDNLGF L   D+M+  K C +  FE+G LSRYG IEL+P++G+LNYGQGL EGMKAYR EDG+++LFRP+ NA R++ GAERMCM SPS+ QFI+ VKQT LAN+RWVPPPGKGSLY+RPLL GSG
Sbjct:    6 CLPQYSTT---SSYLSKIWGFRMHGTKAAASVVEEHVSGAEREDEEYADVDWDNLGFSLVRTDFMFATKSCRDGNFEQGYLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRVLLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRWVPPPGKGSLYLRPLLFGSG 180          
BLAST of FC932211 vs. ExPASy Swiss-Prot
Match: BCAT3_ARATH (Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.366e-51
Identity = 93/135 (68.89%), Postives = 117/135 (86.67%), Query Frame = 2
Query:  227 ESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQ-LILFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSG 625
            E AD +DWD +GFGL PADYMY MKC+ D  F KG L R+G IE+SPS+GVLNYGQGLFEG+KAYRK+DG  ++LFRP++NA R++ GAERMCMP+P+++QF++AV +T LANKRWVPPPGKGSLY+RPLL+G+G
Sbjct:   75 ELAD-IDWDTVGFGLKPADYMYVMKCNIDGEFSKGELQRFGNIEISPSAGVLNYGQGLFEGLKAYRKKDGNNILLFRPEENAKRMRNGAERMCMPAPTVEQFVEAVTETVLANKRWVPPPGKGSLYVRPLLMGTG 208          
BLAST of FC932211 vs. ExPASy Swiss-Prot
Match: BCAT5_ARATH (Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.783e-51
Identity = 99/179 (55.31%), Postives = 133/179 (74.30%), Query Frame = 2
Query:   98 LRNF-SQSLRVGSAFLK-SGDFCRHTSQAAASLQQVCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLILFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSG 625
            LRNF S SLR+       S +F    S+ + + +     S+ +D      +DWD + FGL P DYMY MKCS D  F +G+L  +G I+++P++GVLNYGQGLFEG+KAYRK+DG ++LFRP++NA R++ GAERMCMPSP+++QF++AVK T LANKRW+PPPGKGSLYIRPLL+G+G
Sbjct:   34 LRNFPSSSLRIRHCPSPISSNFI--VSEVSRNRRCDAVSSSTTDVTELAEIDWDKIDFGLKPTDYMYAMKCSRDGEFSQGQLQPFGNIDINPAAGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAIRMRNGAERMCMPSPTVEQFVEAVKTTVLANKRWIPPPGKGSLYIRPLLMGTG 210          
BLAST of FC932211 vs. ExPASy Swiss-Prot
Match: BCAT7_ARATH (Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 9.159e-48
Identity = 85/135 (62.96%), Postives = 105/135 (77.78%), Query Frame = 2
Query:  224 DESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLILFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSG 625
            DE   ++ WD LGF L P DYMY  KC   + F  G +  YG I +SP +G+LNYGQGLFEG+KAYR EDG++ LFRPDQNA R+QTGA+R+CM  PS +QF++AVKQT LAN +WVPPPGKG+LYIRPLL+G+G
Sbjct:   18 DEKYANVKWDELGFALVPTDYMYVAKCKQGESFSTGEIVPYGDISISPCAGILNYGQGLFEGLKAYRTEDGRITLFRPDQNAIRMQTGADRLCMTPPSPEQFVEAVKQTVLANNKWVPPPGKGALYIRPLLIGTG 152          
BLAST of FC932211 vs. ExPASy Swiss-Prot
Match: BCAT6_ARATH (Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.562e-47
Identity = 85/135 (62.96%), Postives = 108/135 (80.00%), Query Frame = 2
Query:  224 DESADHMDWDNLGFGLTPADYMYTMKC-SNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLILFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSG 625
            DE   ++ W+ LGF LTP DYMY  KC   + F +G++  YG I +SP S +LNYGQGLFEG+KAYR ED ++ +FRPDQNA R+QTGAER+CM  P+++QF++AVKQT LANK+WVPPPGKG+LYIRPLL+GSG
Sbjct:   15 DEKYANVKWEELGFALTPIDYMYVAKCRQGESFTQGKIVPYGDISISPCSPILNYGQGLFEGLKAYRTEDDRIRIFRPDQNALRMQTGAERLCMTPPTLEQFVEAVKQTVLANKKWVPPPGKGTLYIRPLLLGSG 149          
BLAST of FC932211 vs. ExPASy Swiss-Prot
Match: BCAT4_ARATH (Probable branched-chain-amino-acid aminotransferase 4 OS=Arabidopsis thaliana GN=BCAT4 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.048e-43
Identity = 78/142 (54.93%), Postives = 110/142 (77.46%), Query Frame = 2
Query:  206 PSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLILFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGP 628
            P + SD++ A+ + W+ L F     DYMY  KC++ + F++G++  +  ++L+P + VL YGQGL+EG+KAYR EDG+++LFRPDQN  RLQ GA+R+ MP PS+DQF+ A+KQ ALANK+W+PPPGKG+LYIRP+L GSGP
Sbjct:    9 PVSVSDEKYAN-VKWEELAFKFVRTDYMYVAKCNHGESFQEGKILPFADLQLNPCAAVLQYGQGLYEGLKAYRTEDGRILLFRPDQNGLRLQAGADRLYMPYPSVDQFVSAIKQVALANKKWIPPPGKGTLYIRPILFGSGP 149          
BLAST of FC932211 vs. ExPASy Swiss-Prot
Match: ILVE_HELPJ (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori J99 GN=ilvE PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.387e-25
Identity = 55/131 (41.98%), Postives = 80/131 (61.07%), Query Frame = 2
Query:  236 DHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLILFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG-SLYIRPLLVGSG 625
            +++DW NLGF     D+ +     N  + +G L     ++LS  S VL+YGQ  FEG+KAYR + G+ +LFRP +NA RLQT  ER+ MP  S + F+ A  +   AN++W+ P   G SLY+RP ++G G
Sbjct:    5 ENLDWKNLGFSYIKTDFRFIATYKNGSWSQGELVSENALQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLKACAEVIKANQKWLAPYKSGASLYLRPFVIGVG 135          
BLAST of FC932211 vs. ExPASy Swiss-Prot
Match: ILVE_HELPY (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori GN=ilvE PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.090e-24
Identity = 55/131 (41.98%), Postives = 80/131 (61.07%), Query Frame = 2
Query:  236 DHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLILFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG-SLYIRPLLVGSG 625
            +++DW NLGF     D+ +     N  + +G L     ++LS  S VL+YGQ  FEG+KAYR + G+ +LFRP +NA RLQT  ER+ MP  S + F+ A  +   AN++W+ P   G SLY+RP ++G G
Sbjct:    5 ENLDWKNLGFSYIKTDFRFIATYKNGSWSQGGLVSENMLQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAPYKSGASLYLRPFVIGVG 135          
BLAST of FC932211 vs. ExPASy Swiss-Prot
Match: ILVE_HAEIN (Branched-chain-amino-acid aminotransferase OS=Haemophilus influenzae GN=ilvE PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.055e-23
Identity = 52/129 (40.31%), Postives = 78/129 (60.47%), Query Frame = 2
Query:  242 MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLILFRPDQNATRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG-SLYIRPLLVGSG 625
            +DW+NLGF     DY +     +  +++G+L+    + +   S  L+YGQ  FEG+KAYR +DG + LFRP  NA R+Q  A+R+ MP    + F+ A K+   AN+ W+ P G G +LY+RP L+G G
Sbjct:    4 LDWNNLGFSYIKTDYRFIAHWKDGKWDEGKLTTDSTLHIHEGSTALHYGQQCFEGLKAYRCKDGSINLFRPQANAERMQRTADRLLMPRVPTELFVRACKEVVKANQDWLGPYGSGATLYLRPFLIGVG 132          
The following BLAST results are available for this feature:
BLAST of FC932211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
BCAT2_ARATH2.175e-5767.08Branched-chain-amino-acid aminotransferase 2, chlo... [more]
BCAT1_ARATH6.130e-5257.30Branched-chain-amino-acid aminotransferase 1, mito... [more]
BCAT3_ARATH1.366e-5168.89Branched-chain-amino-acid aminotransferase 3, chlo... [more]
BCAT5_ARATH1.783e-5155.31Branched-chain-amino-acid aminotransferase 5, chlo... [more]
BCAT7_ARATH9.159e-4862.96Putative branched-chain-amino-acid aminotransferas... [more]
BCAT6_ARATH1.562e-4762.96Branched-chain-amino-acid aminotransferase 6 OS=Ar... [more]
BCAT4_ARATH1.048e-4354.93Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_HELPJ6.387e-2541.98Branched-chain-amino-acid aminotransferase OS=Heli... [more]
ILVE_HELPY1.090e-2441.98Branched-chain-amino-acid aminotransferase OS=Heli... [more]
ILVE_HAEIN2.055e-2340.31Branched-chain-amino-acid aminotransferase OS=Haem... [more]

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Properties
Property NameValue
Genbank descriptionC34205G11EF PostHarveN Citrus clementina cDNA clone C34205G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932211 ID=FC932211; Name=FC932211; organism=Citrus clementina; type=EST; length=630bp
GGGAATCTGTTCCGTCCGTACTTCATATTGCTCAATTACCTAGCTACCTT
TTCTCAGAAGAATGATGAGGCCAGCAACAATGATTCGAAGCGCATGCTTA
CGAAATTTTAGTCAATCTTTGCGGGTTGGTTCTGCTTTTCTCAAGTCTGG
AGATTTCTGTAGACACACGTCCCAGGCTGCTGCTTCTCTGCAACAAGTTT
GTGAACCATCTGCTTACAGCGACGATGAGAGTGCTGATCATATGGACTGG
GATAACCTTGGCTTTGGTCTTACACCAGCGGACTACATGTACACCATGAA
ATGTTCTAACGACTATTTTGAGAAAGGACGGCTGAGTCGCTATGGAAAGA
TTGAGTTGAGCCCTTCTTCAGGAGTCTTAAATTATGGGCAGGGACTCTTT
GAAGGTATGAAAGCATACAGAAAGGAAGATGGGCAACTCATTCTCTTCCG
TCCTGATCAAAATGCCACCCGCTTGCAAACTGGTGCCGAGAGAATGTGCA
TGCCTTCTCCCTCAATTGATCAATTCATTGACGCTGTTAAACAAACTGCT
CTTGCCAATAAGCGTTGGGTTCCTCCTCCTGGGAAAGGGTCTTTGTACAT
AAGGCCTCTACTTGTCGGAAGTGGTCCTAT
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