FC932226

Overview
NameFC932226
Unique NameFC932226
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15476 contig Ccv1_Contig15476:1..662. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932226 vs. ExPASy Swiss-Prot
Match: AN13B_MOUSE (Ankyrin repeat domain-containing protein 13B OS=Mus musculus GN=Ankrd13b PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.859e-26
Identity = 64/163 (39.26%), Postives = 97/163 (59.51%), Query Frame = 1
Query:  103 LAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDFYMEITFHFESSVIPFIGRIAPSDTYRIWKRGSNLRADMTLAGFDGFRIQRSDQTFLFLGE 591
            L  E++A  V   I++ D  GR TPLHLA  L     A +L+A GAD   +N +GW+ LQEAV TR+  +  ++ R+       K    +P ++    + +DFY+E+ + F +S +P + +I PSDTY++WK G NLR D TL GFD    QR +++F+F G+
Sbjct:   30 LEKEVRAGQVD--IEQLDPRGR-TPLHLATTLGHLECARVLLAHGADVGRENRSGWTVLQEAVSTRDLELVQLVLRYRDYQRVVKRLAGIPMLLEKLRKAQDFYVEMKWEF-TSWVPLVSKICPSDTYKVWKSGQNLRVDTTLLGFDHMTWQRGNRSFVFRGQ 188          
BLAST of FC932226 vs. ExPASy Swiss-Prot
Match: AN13B_HUMAN (Ankyrin repeat domain-containing protein 13B OS=Homo sapiens GN=ANKRD13B PE=2 SV=4)

HSP 1 Score: 117.087 bits (292), Expect = 8.288e-26
Identity = 64/163 (39.26%), Postives = 97/163 (59.51%), Query Frame = 1
Query:  103 LAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDFYMEITFHFESSVIPFIGRIAPSDTYRIWKRGSNLRADMTLAGFDGFRIQRSDQTFLFLGE 591
            L  E++A  V   I++ D  GR TPLHLA  L     A +L+A GAD   +N +GW+ LQEAV TR+  +  ++ R+       K    +P ++    + +DFY+E+ + F +S +P + +I PSDTY++WK G NLR D TL GFD    QR +++F+F G+
Sbjct:   30 LEKEVRAGQVD--IEQLDPRGR-TPLHLATTLGHLECARVLLAHGADVGRENRSGWTVLQEAVSTRDLELVQLVLRYRDYQRVVKRLAGIPVLLEKLRKAQDFYVEMKWEF-TSWVPLVSKICPSDTYKVWKSGQNLRVDTTLLGFDHMTWQRGNRSFVFRGQ 188          
BLAST of FC932226 vs. ExPASy Swiss-Prot
Match: AN13C_MOUSE (Ankyrin repeat domain-containing protein 13C OS=Mus musculus GN=Ankrd13c PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.977e-19
Identity = 55/155 (35.48%), Postives = 86/155 (55.48%), Query Frame = 1
Query:  142 IDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDFYMEITFHFESSVIPFIGRIAPSDTYRIWKRGSNLRADMTLAGFDGFRIQRSDQTFLFLGEGYTSE 606
            I ++D  G  TPLHLAV L +   A +L+A  A   ++N  GWS L EA+   +  +   + R  +  +      + PR++ +   + DFY+E+ + F+S V P + RI PSD  +I+K+G N+R D TL  F   + QR D +F+F G+   SE
Sbjct:  137 IGQKDNHGN-TPLHLAVMLGNKECAHLLLAHNAPVKVKNAQGWSPLAEAISYGDRQMITALLRKLKQQSRESVGEKRPRLLKALKELGDFYLELHWDFQSWV-PLLSRILPSDACKIYKQGINIRLDTTLIDFTDMKCQRGDLSFIFNGDAAPSE 289          
BLAST of FC932226 vs. ExPASy Swiss-Prot
Match: AN13C_DANRE (Ankyrin repeat domain-containing protein 13C OS=Danio rerio GN=ankrd13c PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.977e-19
Identity = 55/155 (35.48%), Postives = 86/155 (55.48%), Query Frame = 1
Query:  142 IDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDFYMEITFHFESSVIPFIGRIAPSDTYRIWKRGSNLRADMTLAGFDGFRIQRSDQTFLFLGEGYTSE 606
            I ++DV G  TPLHLAV +     A +L+A  A   ++N  GWS L EA+   +  +   + R  +  +      + PR++ +   + DFY+E+ + F+S V P + RI PSD  +I+K+G N+R D TL  F   + QR D +F+F G+   SE
Sbjct:   84 IAQKDVHGN-TPLHLAVMMGHKECAHLLLAHNAPVKVKNAQGWSPLAEAISYGDRQMITALLRKLKQQSRESVEDKRPRLLKALKELGDFYLELHWDFQSWV-PLLSRILPSDACKIYKQGINIRLDTTLIDFTDMKCQRGDLSFIFCGDAPPSE 236          
BLAST of FC932226 vs. ExPASy Swiss-Prot
Match: AN13A_HUMAN (Ankyrin repeat domain-containing protein 13A OS=Homo sapiens GN=ANKRD13A PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 1.977e-19
Identity = 60/168 (35.71%), Postives = 88/168 (52.38%), Query Frame = 1
Query:  103 LAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDFYMEITFHFESSVIPFIGRIAPSDTYRIWKRGSNLRADMTLAGFDGFRIQRSDQTFLFLGEGYTSE 606
            L  ELQ   V AV    D  GR T LHLAV L    SA +L+   AD + +N  GW+ L EAV T +  +   + +H      +     +P ++       DFY+++ + F +S +P + RI P+D  RIWK G+ LR D+TL GF+     R  ++F+F GE   +E
Sbjct:   25 LEKELQGQNVEAV----DPRGR-TLLHLAVSLGHLESARVLLRHKADVTKENRQGWTVLHEAVSTGDPEMVYTVLQHRDYHNTSMALEGVPELLQKILEAPDFYVQMKWEF-TSWVPLVSRICPNDVCRIWKSGAKLRVDITLLGFENMSWIRGRRSFIFKGEDNWAE 186          
BLAST of FC932226 vs. ExPASy Swiss-Prot
Match: A13CA_XENLA (Ankyrin repeat domain-containing protein 13C-A OS=Xenopus laevis GN=ankrd13c-A PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.977e-19
Identity = 55/155 (35.48%), Postives = 86/155 (55.48%), Query Frame = 1
Query:  142 IDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDFYMEITFHFESSVIPFIGRIAPSDTYRIWKRGSNLRADMTLAGFDGFRIQRSDQTFLFLGEGYTSE 606
            I ++D  G  TPLHLAV L +   A +L+A  A   ++N  GWS L EA+   +  +   + R  +  +      + PR++ +   + DFY+E+ + F+S V P + RI PSD  +I+K+G N+R D TL  F   + QR D +F+F G+   SE
Sbjct:  106 IGQKDSHGN-TPLHLAVMLGNKECAHLLLAHNAPVKVKNAQGWSPLAEAISYGDRQMITALLRKLKQQSRESVEEKRPRLLKALKELGDFYLELHWDFQSWV-PLLSRILPSDACKIYKQGINIRLDTTLIDFTDMKCQRGDLSFIFNGDAAPSE 258          
BLAST of FC932226 vs. ExPASy Swiss-Prot
Match: AN13C_XENTR (Ankyrin repeat domain-containing protein 13C OS=Xenopus tropicalis GN=ankrd13c PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.583e-19
Identity = 55/155 (35.48%), Postives = 86/155 (55.48%), Query Frame = 1
Query:  142 IDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDFYMEITFHFESSVIPFIGRIAPSDTYRIWKRGSNLRADMTLAGFDGFRIQRSDQTFLFLGEGYTSE 606
            I ++D  G  TPLHLAV L +   A +L+A  A   ++N  GWS L EA+   +  +   + R  +  +      + PR++ +   + DFY+E+ + F+S V P + RI PSD  +I+K+G N+R D TL  F   + QR D +F+F G+   SE
Sbjct:  105 IGQKDNHGN-TPLHLAVMLGNKECAHLLLAHNAPVKVKNAQGWSPLAEAISYGDRQMITALLRKLKQQSRESVEEKRPRLLKALKELGDFYLELHWDFQSWV-PLLSRILPSDACKIYKQGINIRLDTTLIDFTDMKCQRGDLSFIFNGDAAPSE 257          
BLAST of FC932226 vs. ExPASy Swiss-Prot
Match: AN13C_HUMAN (Ankyrin repeat domain-containing protein 13C OS=Homo sapiens GN=ANKRD13C PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.583e-19
Identity = 55/155 (35.48%), Postives = 86/155 (55.48%), Query Frame = 1
Query:  142 IDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDFYMEITFHFESSVIPFIGRIAPSDTYRIWKRGSNLRADMTLAGFDGFRIQRSDQTFLFLGEGYTSE 606
            I ++D  G  TPLHLAV L +   A +L+A  A   ++N  GWS L EA+   +  +   + R  +  +      + PR++ +   + DFY+E+ + F+S V P + RI PSD  +I+K+G N+R D TL  F   + QR D +F+F G+   SE
Sbjct:  137 IGQKDNHGN-TPLHLAVMLGNKECAHLLLAHNAPVKVKNAQGWSPLAEAISYGDRQMITALLRKLKQQSRESVEEKRPRLLKALKELGDFYLELHWDFQSWV-PLLSRILPSDACKIYKQGINIRLDTTLIDFTDMKCQRGDLSFIFNGDAAPSE 289          
BLAST of FC932226 vs. ExPASy Swiss-Prot
Match: A13CB_XENLA (Ankyrin repeat domain-containing protein 13C-B OS=Xenopus laevis GN=ankrd13c-B PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.583e-19
Identity = 55/155 (35.48%), Postives = 86/155 (55.48%), Query Frame = 1
Query:  142 IDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDFYMEITFHFESSVIPFIGRIAPSDTYRIWKRGSNLRADMTLAGFDGFRIQRSDQTFLFLGEGYTSE 606
            I ++D  G  TPLHLAV L +   A +L+A  A   ++N  GWS L EA+   +  +   + R  +  +      + PR++ +   + DFY+E+ + F+S V P + RI PSD  +I+K+G N+R D TL  F   + QR D +F+F G+   SE
Sbjct:  109 IGQKDNHGN-TPLHLAVMLGNKECAHLLLAHNAPVKVKNAQGWSPLAEAISYGDRQMITALLRKLKQQSRESVEEKRPRLLKALKELGDFYLELHWDFQSWV-PLLSRILPSDACKIYKQGINIRLDTTLIDFTDMKCQRGDLSFIFNGDAAPSE 261          
BLAST of FC932226 vs. ExPASy Swiss-Prot
Match: AN13A_MOUSE (Ankyrin repeat domain-containing protein 13A OS=Mus musculus GN=Ankrd13a PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 4.870e-18
Identity = 57/168 (33.93%), Postives = 87/168 (51.79%), Query Frame = 1
Query:   85 NTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDFYMEITFHFESSVIPFIGRIAPSDTYRIWKRGSNLRADMTLAGFDGFRIQRSDQTFLFLG 588
            N + E L  EL+     A+    D  GR T LHLAV L    SA +L+   AD + +N  GW+ L EAV T +  +   + +H      +     +P ++       DFY+++ + F +S +P + RI P+D  RIWK G+ LR D+TL GF+     R  ++F+F G
Sbjct:   19 NNDYEQLEKELRDQNAEAL----DPRGR-TLLHLAVSLGHLESARVLLRHKADVTKENGQGWTVLHEAVSTGDPEMVYTVLQHRDYHNTSMALEGVPELLHKILEAPDFYVQMKWEF-TSWVPLVSRICPNDVCRIWKSGAKLRVDITLLGFENMSWIRGRRSFIFKG 180          
The following BLAST results are available for this feature:
BLAST of FC932226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
AN13B_MOUSE4.859e-2639.26Ankyrin repeat domain-containing protein 13B OS=Mu... [more]
AN13B_HUMAN8.288e-2639.26Ankyrin repeat domain-containing protein 13B OS=Ho... [more]
AN13C_MOUSE1.977e-1935.48Ankyrin repeat domain-containing protein 13C OS=Mu... [more]
AN13C_DANRE1.977e-1935.48Ankyrin repeat domain-containing protein 13C OS=Da... [more]
AN13A_HUMAN1.977e-1935.71Ankyrin repeat domain-containing protein 13A OS=Ho... [more]
A13CA_XENLA1.977e-1935.48Ankyrin repeat domain-containing protein 13C-A OS=... [more]
AN13C_XENTR2.583e-1935.48Ankyrin repeat domain-containing protein 13C OS=Xe... [more]
AN13C_HUMAN2.583e-1935.48Ankyrin repeat domain-containing protein 13C OS=Ho... [more]
A13CB_XENLA2.583e-1935.48Ankyrin repeat domain-containing protein 13C-B OS=... [more]
AN13A_MOUSE4.870e-1833.93Ankyrin repeat domain-containing protein 13A OS=Mu... [more]
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Properties
Property NameValue
Genbank descriptionC34206A02EF PostHarveN Citrus clementina cDNA clone C34206A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932226 ID=FC932226; Name=FC932226; organism=Citrus clementina; type=EST; length=662bp
CATTTGGCAGTTGCACGTCGTGACTATGCTGCCCTGAGGCGCATTATTGC
AACTCTCCCTCGGCTTTCCAAGGCTGGGGAGGTTAATACCGAAGATGAGT
CTCTTGCTGCTGAGCTCCAAGCAGATGCTGTCTCAGCTGTCATTGATCGC
CGTGATGTTCCTGGCCGTGAGACCCCTTTGCACCTTGCTGTTAGGCTGAG
AGACCCAATTTCTGCAGAGATTTTGATGGCAGCAGGAGCAGATTGGAGCC
TCCAGAACGAGAATGGTTGGAGTGCTTTGCAAGAAGCTGTTTGCACAAGG
GAGGAGTCAATTGCTATGATTATTGCAAGACATTACCAACCCCTTGCCTG
GGCAAAATGGTGTCGCAGACTTCCACGAATTGTTGCCTCAGCAGCTCGTA
TACGTGACTTCTACATGGAGATAACTTTTCATTTTGAGAGCTCAGTCATT
CCATTTATTGGGCGTATTGCCCCATCTGATACTTACCGCATATGGAAACG
TGGGTCGAATCTCCGTGCGGATATGACCCTTGCTGGGTTTGATGGCTTTC
GCATTCAACGGTCGGACCAGACATTTCTCTTTTTGGGAGAGGGCTATACA
TCAGAAGATGGCAATGTGTCCTTGTCACCTGGTTCTTTGATTGTTCTTTC
TCANTAGGAGAA
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