FC932229
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932229 vs. ExPASy Swiss-Prot
Match: PPCS_HUMAN (Phosphopantothenate--cysteine ligase OS=Homo sapiens GN=PPCS PE=1 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.131e-39 Identity = 88/187 (47.06%), Postives = 110/187 (58.82%), Query Frame = 2 Query: 155 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQVCQPYSE-----AVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEW 700 RRV VTSGGT VPLE R VR++DNFSSG RGA S E + GY V+FLYR + PY P +L + + + +E A+R + A A G L + FTT+ +YL +LQ A + LGP +MFYLAAAVSDFYVP M EHKIQS GPL + + VPK+LS L K+W Sbjct: 35 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLAVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFYVPVSEMPEHKIQSSGGPLQITMKMVPKLLSPLVKDW 221
BLAST of FC932229 vs. ExPASy Swiss-Prot
Match: PPCS_MOUSE (Phosphopantothenate--cysteine ligase OS=Mus musculus GN=Ppcs PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.613e-39 Identity = 85/187 (45.45%), Postives = 112/187 (59.89%), Query Frame = 2 Query: 155 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEES-----AVQVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEW 700 RRV +TSGGT VPLE R VR++DNFSSG RGAAS E + GY V+FLYR + PY P A+L + + +++ + A++ + A A G L + FTT+ +YL +LQ A++ LG +MFYLAAAVSDFY+P M EHKI S GPL + + VPKMLS L K+W Sbjct: 35 RRVVLITSGGTKVPLEARAVRFLDNFSSGRRGAASAEVFLAAGYGVLFLYRARSAFPYAHRFPPQAWLSALRPSGPAQSGKLSLEAEENALPGFAAALQSYQEAAAAGTFLAVEFTTLADYLHLLQAAALALSPLGSSAMFYLAAAVSDFYIPVSEMPEHKIHSSGGPLQITMKMVPKMLSPLVKDW 221
BLAST of FC932229 vs. ExPASy Swiss-Prot
Match: YJ2I_SCHPO (Uncharacterized protein C4B3.18 OS=Schizosaccharomyces pombe GN=SPCC4B3.18 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.448e-36 Identity = 91/225 (40.44%), Postives = 130/225 (57.78%), Query Frame = 2 Query: 38 PLNSEIESFFDSVPPLNDRAAISEKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSL--PDDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSG--PLDMQLLQVPKMLSVLRKEW 700 P + FF+ P N +S +++FI L +S ++ +A VTSGGT VPLEQ VR+IDNFS+G+RGAAS E+ K GY+VIFLYR + P+ P E ++E V Q + V A+ + L+ +P+TT+ EYL L+ IA + + ++FYLAAAVSDF++P K ++EHKIQSGSG L++++ VPK L L W Sbjct: 2 PEMDKSNDFFEENPCPNSLGDVSSLIEDFINL---QSNSQNIAFVTSGGTLVPLEQNTVRFIDNFSAGNRGAASAEYFCKSGYSVIFLYRNYSLMPFTRRYEGPWTNLFERSNGSQEKPWIVKQEFQSTVFNALNELDTYTKHHRLIMIPYTTLTEYLWYLKAIAERLQIIASRALFYLAAAVSDFHIPPKELSEHKIQSGSGSNKLEVKMHPVPKFLRFLVDTW 223
BLAST of FC932229 vs. ExPASy Swiss-Prot
Match: YII3_YEAST (Uncharacterized protein YIL083C OS=Saccharomyces cerevisiae GN=YIL083C PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.929e-27 Identity = 90/242 (37.19%), Postives = 126/242 (52.07%), Query Frame = 2 Query: 47 SEIESFFDSVPPLNDRAAISEKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLP---DDAFLECFEVTEESAVQVCQPYSEAV--KRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSG-------------------SGPLDMQLLQVPKMLSVLRKEW 700 +E E +F + P + + KEFI L S ++ +TSGGTTVPLE VR+IDNFS+G RGA+S E + GY+VIFL+R + PY S + FL+ +S ++ ++E V + + D + LLL LPFTT+ +YL L+ IA + G +FYLAAAVSDF+VP+ + +HKIQSG G L + L VPK L L + W Sbjct: 38 TEEEQYFKTNPKPAYIDELIKDAKEFIDLQYSLK-RNKIVLITSGGTTVPLENNTVRFIDNFSAGTRGASSAEQFLANGYSVIFLHREFSLTPYNRSFSHSINTLFLDYI----DSEGKIKPEFAENVLKNKKLYDKYMEKEEKLLL-LPFTTVNQYLWSLKSIAKLLNNSG--CLFYLAAAVSDFFVPYSRLPQHKIQSGDNGKMGANNDTEGTTRTTPDGKLIVNLDPVPKFLRRLVESW 271 The following BLAST results are available for this feature:
BLAST of FC932229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932229 ID=FC932229; Name=FC932229; organism=Citrus clementina; type=EST; length=700bpback to top |