FC932232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932232 vs. ExPASy Swiss-Prot
Match: SYFA_ARATH (Probable phenylalanyl-tRNA synthetase alpha chain OS=Arabidopsis thaliana GN=At4g39280 PE=2 SV=3) HSP 1 Score: 336.65 bits (862), Expect = 7.278e-92 Identity = 167/206 (81.07%), Postives = 182/206 (88.35%), Query Frame = 1 Query: 73 MAEEAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSLHGFRYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGKQVSRKVQNVEDKVKDLLLQVQNGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYKLHAK 690 MAEEAILG+L+ NEQI+DSG F+AE DHN++VNVIKSLHGFRYID QDIK+ETW+LT EGKKYAAEGSPEVQLFLAVP EGSISKDELQKKL PAVFKIGCSQAGKNKWVEMGKQVSRKV++VEDKVK LLQ+Q G KE I+SLKARKLIVPQ WKGYSV+KGPNYAP+RKK ATDLTRENLQ +WKELEFKEY AK Sbjct: 1 MAEEAILGFLQNNEQITDSGQFSAEFNIDHNELVNVIKSLHGFRYIDVQDIKKETWILTDEGKKYAAEGSPEVQLFLAVPEEGSISKDELQKKLAPAVFKIGCSQAGKNKWVEMGKQVSRKVKDVEDKVKGQLLQIQQGKEFDKESINSLKARKLIVPQIWKGYSVKKGPNYAPERKKVATDLTRENLQ--NWKELEFKEYNFKAK 204
BLAST of FC932232 vs. ExPASy Swiss-Prot
Match: SYFA_DANRE (Phenylalanyl-tRNA synthetase alpha chain OS=Danio rerio GN=farsa PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.765e-29 Identity = 81/211 (38.39%), Postives = 122/211 (57.82%), Query Frame = 1 Query: 82 EAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYKLHA 687 EA+L +E+ + DS + +A G DH VV +KSL I A+ + W LTGEG++ A +GS E ++F A+PAEG + +++L K A K+G S+A NKW+ + G +V R V+++ED V+D L VQNG + L ++E + LK RKL+ T K Y + KG +++ K T+LT E + G+WKE +FK Y A Sbjct: 8 EALLQRVEQLDGGVDSQDVSAALGVDHQLVVGAVKSLQALGEVISAEQKSSKHWELTGEGREIAEQGSHEARVFNAIPAEG-LPQNQLMKM---ASGKVGFSKAMSNKWIRLDKAHEGGPRVFRTVESIEDTVRDKLQLVQNGQSAKLEEKEKNELKKRKLLAEVTVKSYWITKGNSFSTTITKQETELTPEMIASGNWKEKKFKPYNFEA 214
BLAST of FC932232 vs. ExPASy Swiss-Prot
Match: SYFA_CHICK (Phenylalanyl-tRNA synthetase alpha chain OS=Gallus gallus GN=FARSA PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.939e-26 Identity = 80/220 (36.36%), Postives = 116/220 (52.73%), Query Frame = 1 Query: 67 SAMAEEAILGYLEKNEQISDSG----NFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQ--NGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYKLHA 687 S E +L LE+ + G AA G DH +V +KSL I+A+ W L+ EG++ +GSPEV+LF +VP+EG D + KL A ++G S+A NKW+ + G ++ R V V+D V+ L QVQ NG +LS+ E + LK RKL++ T K Y +RKG ++ + TDLT E + G W++L FK Y A Sbjct: 2 SPSVAELLLQRLERTPPGPEGGLCSLEAAAALGLDHQTLVGAVKSLQALGEVIEAETRATTRWELSAEGEEVLRDGSPEVRLFRSVPSEGLPQSDAM--KLPGA--QVGFSKAMANKWLRLDKGAPGGPRIFRAVDAVQDVVQSSLRQVQEGNGGSLSERERTDLKRRKLLLEVTLKSYWIRKGSAFSTAVVRQETDLTPEMIATGSWRKLPFKAYNFSA 217
BLAST of FC932232 vs. ExPASy Swiss-Prot
Match: SYFA_HUMAN (Phenylalanyl-tRNA synthetase alpha chain OS=Homo sapiens GN=FARSA PE=1 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 1.309e-24 Identity = 75/211 (35.55%), Postives = 114/211 (54.03%), Query Frame = 1 Query: 82 EAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYKLHA 687 E +L LE ++ DS AAE G +H VV +KSL I+A+ + W LT EG++ A EGS E ++F ++P EG +++ EL + K+G S+A NKW+ + G +V R V ++ED+V+ L V+ G A L ++E S L+ RKL+ T K Y V KG ++ K T+L+ E + G W++ FK Y A Sbjct: 8 ELLLRRLEASDGGLDSAELAAELGMEHQAVVGAVKSLQALGEVIEAELRSTKHWELTAEGEEIAREGSHEARVFRSIPPEG-LAQSELMRLPSG---KVGFSKAMSNKWIRVDKSAADGPRVFRVVDSMEDEVQRRLQLVRGGQAEKLGEKERSELRKRKLLAEVTLKTYWVSKGSAFSTSISKQETELSPEMISSGSWRDRPFKPYNFLA 214
BLAST of FC932232 vs. ExPASy Swiss-Prot
Match: SYFA_RAT (Phenylalanyl-tRNA synthetase alpha chain OS=Rattus norvegicus GN=Farsa PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.915e-24 Identity = 71/219 (32.42%), Postives = 115/219 (52.51%), Query Frame = 1 Query: 73 MAEEAILGYLEKNEQISDSG----NFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYKLHAK 690 MA+ +L L + +++D G A + G +H VV +KSL I+A+ + W LT EG++ A EGS E ++F ++P EG + + +Q K+G S+A NKW+ + G +V R V ++ED+V+ L QVQ G A L+++E + L+ RKL+ K Y V KG ++ K +L+ E + G W++ FK Y A+ Sbjct: 1 MADNPVLEQLLRRLEVADGGLDSAELATQLGVEHQAVVGAVKSLQALGEVIEAELRSTKCWELTTEGEEIAREGSHEARVFRSIPLEGLVQSELMQLPSG----KVGFSKAMSNKWIRVDKSAADGPRVFRVVDSIEDEVQRRLQQVQAGQAEKLAEKERNELRKRKLLTEVILKTYWVSKGKGFSTSVSKQEAELSPEMISSGSWRDRPFKPYNFSAR 215
BLAST of FC932232 vs. ExPASy Swiss-Prot
Match: SYFA_PONAB (Phenylalanyl-tRNA synthetase alpha chain OS=Pongo abelii GN=FARSA PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24 Identity = 74/211 (35.07%), Postives = 113/211 (53.55%), Query Frame = 1 Query: 82 EAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYKLHA 687 E +L LE ++ DS AAE G +H VV +KSL I+A+ + W LT EG++ A EGS E ++F ++P EG +++ EL + K+G S+A NKW+ + G +V R V ++ED+V+ L V+ G A L ++E S L+ RKL+ K Y V KG ++ K T+L+ E + G W++ FK Y A Sbjct: 8 ELLLRRLEASDGGLDSAELAAELGMEHQAVVGAVKSLQALGEVIEAELRSTKRWELTAEGEEIAREGSHEARVFRSIPPEG-LAQSELMRLPSG---KVGFSKAMSNKWIRVDKSAADGPRVFRVVDSMEDEVQRRLQLVRGGQAEKLGEKERSELRKRKLLAEVILKTYWVSKGSAFSTSISKQETELSPEMISSGSWRDRPFKPYNFLA 214
BLAST of FC932232 vs. ExPASy Swiss-Prot
Match: SYFA_MOUSE (Phenylalanyl-tRNA synthetase alpha chain OS=Mus musculus GN=Farsa PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.379e-23 Identity = 69/219 (31.51%), Postives = 113/219 (51.60%), Query Frame = 1 Query: 73 MAEEAILGYLEKNEQISDSG----NFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYKLHAK 690 MA+ +L L + +++D G A + G +H VV +KSL I+A+ + W LT EG++ A EGS E ++F ++P EG + + + K+G S+A NKW+ + G +V R V ++ED+V+ L VQ G A L+++E + L+ RKL+ K Y V KG ++ K +L+ E + G W++ FK Y A+ Sbjct: 1 MADNPVLELLLRRLEVADGGLDSAELATQLGVEHQAVVGAVKSLQALGEVIEAELRSTKCWELTTEGEEIAREGSHEARVFRSIPLEGLVQSELMHLPSG----KVGFSKAMSNKWIRVDKSAADGPRVFRVVDSIEDEVQKRLQLVQAGQAEKLAEKERNELRKRKLLTEVILKTYWVSKGKAFSTSVSKQEAELSPEMISSGSWRDRPFKPYNFSAR 215
BLAST of FC932232 vs. ExPASy Swiss-Prot
Match: SYFAA_XENLA (Phenylalanyl-tRNA synthetase alpha chain A OS=Xenopus laevis GN=farsa-A PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.379e-23 Identity = 66/197 (33.50%), Postives = 102/197 (51.78%), Query Frame = 1 Query: 124 DSGNFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYKLHA 687 DS AA G +H VV +KSL I A+ + W L+ EG++ EGS E ++F +P EG + +++ K+G S+A NKW+ + G ++ R V ++ED VK+ L + G A +++++ + LK RKL+ T K Y V KG ++ K TDLT E + G W+E +FK Y A Sbjct: 23 DSLELAALLGVEHQQVVGAVKSLQCLGEIIQAEQRSSKKWELSSEGEEIGREGSHEARVFQTLPKEGLLQAQLMKQPFS----KVGFSKAMSNKWIRLDKAAEGGPRIYRVVDSIEDTVKEKLQLILKGRADDVNEKDRNELKKRKLVNEVTVKSYWVTKGSGFSTSITKQETDLTPEMIASGSWREKQFKGYNFDA 215
BLAST of FC932232 vs. ExPASy Swiss-Prot
Match: SYFAB_XENLA (Phenylalanyl-tRNA synthetase alpha chain B OS=Xenopus laevis GN=farsa-B PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.564e-22 Identity = 69/197 (35.03%), Postives = 105/197 (53.30%), Query Frame = 1 Query: 124 DSGNFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGKQ------VSRKVQNVEDKVKDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYKLHA 687 D+ AA DH VV +KSL I+A+ + W L+ EG++ A GS E ++F ++P EG + + + KL A K+G S+A NKW+ + K V R V+ +ED VK+ L + G A +++++ + LK RKL+ T K Y V KG ++ K TDLT E + G W+E +FK Y +A Sbjct: 23 DTLELAAVLSVDHQQVVGAVKSLQCLGEIIEAEQRSSKKWELSSEGEEIAQVGSHEARVFQSLPKEGLLQAELM--KLPFA--KVGFSKAMSNKWIRLDKAAAGGPCVYRVVETIEDTVKEKLQLILKGRADDVNEKDKNELKKRKLVNEVTVKSYWVTKGSGFSTSITKQETDLTPEMIASGSWREKQFKGYNFNA 215
BLAST of FC932232 vs. ExPASy Swiss-Prot
Match: SYFA_DROME (Probable phenylalanyl-tRNA synthetase alpha chain OS=Drosophila melanogaster GN=CG2263 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.291e-19 Identity = 71/211 (33.65%), Postives = 109/211 (51.66%), Query Frame = 1 Query: 82 EAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSL--HGFRYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGKQVS-----RKVQNVEDKVKDLLLQVQ--NGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYKLHA 687 E IL +LE ++ +D+ + AA DH +V +KS+ HG + A+ + ++ LT EG+ GS E ++ VP EG I++ L A K+G S+A + W+ + K V+ RKV + D V++ L QV G L +E++ K RKL+ T K + + +GP +A K TDLT E L G W +L+FK Y A Sbjct: 7 ERILQHLETTDK-ADTLDLAALFAEDHQKIVGSLKSIQAHG-ELVTAETVTHKSLGLTDEGRAVVENGSHEALVYDLVPPEG-IAQAALMAA-GGANAKVGFSKAMSHGWILVDKSVTPPLVRRKVDTITDVVRNQLQQVALGKGDQLPAKEVADFKKRKLLQETTTKSFVLARGPEFATTLTKLETDLTVEMLANGLWDQLKFKAYNFDA 213 The following BLAST results are available for this feature:
BLAST of FC932232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932232 ID=FC932232; Name=FC932232; organism=Citrus clementina; type=EST; length=691bpback to top |