FC932241

Overview
NameFC932241
Unique NameFC932241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5076 contig Ccv1_Contig5076:280..937. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_CANAL (NADH-cytochrome b5 reductase 1 OS=Candida albicans GN=CBR1 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.684e-42
Identity = 81/168 (48.21%), Postives = 115/168 (68.45%), Query Frame = 3
Query:  153 YLYSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +L  SKK    L P+ F++F L++++++SHN A + F LP  T  LGLPIGQHIS  G    G+EV++ YTP + D  +GHF+L+IK Y  G +S H     VG+++ ++GPKG F Y P  V++FGM AGG+GI PM+Q+  AIL+  + +TK+HL+YANVT  DIL
Sbjct:   37 FLQQSKKHTPVLKPDEFQKFPLIEKIRVSHNSAIYRFGLPKSTDRLGLPIGQHISI-GATIDGKEVVRSYTPISTDDQLGHFDLLIKTYENGNISRHVAGKNVGEHIEIRGPKGFFTYTPNMVKSFGMIAGGTGIAPMYQIITAILKNPEDKTKIHLVYANVTESDIL 203          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_KLULA (NADH-cytochrome b5 reductase 1 OS=Kluyveromyces lactis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.388e-41
Identity = 84/167 (50.30%), Postives = 112/167 (67.07%), Query Frame = 3
Query:  159 YSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSD-VGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            Y SKK K  LD E  +EF LV +  L+HN A + F LP  T VLGLPIGQHIS +  +  G+++++ YTPT+LDSD VGHFEL+IK Y +G +S HF ++ +GD + V+GPKG + YQP      GM AGG+GI PM+Q+ ++I      +TKV L+Y N T  DIL
Sbjct:   25 YQSKKDKPVLDKEKLQEFPLVAKTVLTHNTAIYRFGLPKSTQVLGLPIGQHISVQA-NINGKDILRSYTPTSLDSDAVGHFELLIKSYEKGNISKHFAQLNIGDKIKVRGPKGFYHYQPNMNEEIGMIAGGTGIAPMYQIMKSIFANDSDKTKVSLVYGNQTEEDIL 190          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_LODEL (NADH-cytochrome b5 reductase 1 OS=Lodderomyces elongisporus GN=CBR1 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.948e-41
Identity = 80/164 (48.78%), Postives = 110/164 (67.07%), Query Frame = 3
Query:  165 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            SKK   +L P+ F++F L+ + Q+SHN A + F LP PT  L LPIGQHIS  G    G+EV++ YTP +L    GHF+L+IK Y  G +S H  E +VGD++ ++GPKG F Y P   ++ G+ AGG+GI PM+Q+  AI+   + +TKVHL+YANVT  DIL
Sbjct:   47 SKKGSPALIPDKFQKFPLISKTQVSHNSAIYRFGLPNPTDTLNLPIGQHISI-GTIIDGKEVVRSYTPISLGDQQGHFDLLIKTYENGNISRHVAEKQVGDFVEIRGPKGFFTYTPNMKKSLGLIAGGTGIAPMYQIITAIMNNPEDKTKVHLLYANVTENDIL 209          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_PICST (NADH-cytochrome b5 reductase 1 OS=Pichia stipitis GN=CBR1 PE=3 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 7.682e-40
Identity = 79/168 (47.02%), Postives = 113/168 (67.26%), Query Frame = 3
Query:  153 YLYSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            ++  SKK    L P+ F++F L+++ ++SHN + + F LP  T  LGLPIGQHIS  G    G+EV++ YTP + D ++G+F+L+IK Y  G +S H    +VG+Y+ ++GPKG F Y P  V++FGM AGG+GI PM+Q+  AIL     +TK+ LIYANVT  DIL
Sbjct:   27 FVQQSKKNTPVLKPDTFQKFPLIEKTRVSHNSSVYRFGLPKSTDRLGLPIGQHISI-GATIGGKEVVRSYTPISTDDELGYFDLLIKTYENGNISKHVDSKKVGEYVEIRGPKGFFTYTPNMVKSFGMIAGGTGIAPMYQIITAILRNPADKTKISLIYANVTESDIL 193          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_YARLI (NADH-cytochrome b5 reductase 1 OS=Yarrowia lipolytica GN=CBR1 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.003e-39
Identity = 84/171 (49.12%), Postives = 114/171 (66.67%), Query Frame = 3
Query:  153 YLYSSKKPKVSLDPEN--FKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDS-DVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            Y +S+ KPK  L   +  FKEF L+++  LSHN A + F LP P+ VLGLPIGQH+S       G+EV++ YTPT+ D  D G+F+++IK YPQG +S +  E+ +GD + V+GPKG F Y  G V +FGM  GG+GITPM+Q+ R I       TKV+L+YANV + DIL
Sbjct:   31 YFFSNSKPKAVLQRGDTAFKEFPLIQKTVLSHNSAIYRFGLPRPSHVLGLPIGQHVSLSANIG-GKEVLRSYTPTSSDLYDKGYFDILIKTYPQGNISKYVSELAIGDTMKVRGPKGNFVYNHGLVESFGMVCGGTGITPMYQILRHIAADPADNTKVNLVYANVNHDDIL 200          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_NEUCR (NADH-cytochrome b5 reductase 1 OS=Neurospora crassa GN=cbr-1 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.812e-39
Identity = 87/172 (50.58%), Postives = 111/172 (64.53%), Query Frame = 3
Query:  159 YSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK----DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAIL--EKTQ*QTKVHLIYANVTYXDIL 656
            Y    PK  L P  F+EF+L ++  +SHNVA + F+LPTP SVLGLPIGQHIS        D   +E+++ YTP + D   G+F+L+IK YP G +S H   ++VG  + VKGPKG F Y P  VR FGM AGG+GITPM QV RAI+       +T+V LI+ANVT  DIL
Sbjct:   49 YFRMLPKKVLKPAVFQEFELKEKTIISHNVAIYRFKLPTPDSVLGLPIGQHISIGAAIEQPDGSTKEIVRSYTPISGDHQPGYFDLLIKSYPTGNISKHMASLQVGQTIRVKGPKGAFVYTPNMVRHFGMVAGGTGITPMLQVIRAIVRGRAAGDRTEVDLIFANVTAQDIL 220          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_DEBHA (NADH-cytochrome b5 reductase 1 OS=Debaryomyces hansenii GN=CBR1 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.493e-39
Identity = 76/164 (46.34%), Postives = 110/164 (67.07%), Query Frame = 3
Query:  165 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            S+K    L P +F++F L+++ ++SHN   + F LP  T  LGLPIGQHI+  G     +EV++ YTP + D ++G+F+L+IK Y  G +S H    ++G+ + ++GPKG F Y PG V +FGM AGG+GITPM+Q+  AIL   + +TKV L+YANVT  DIL
Sbjct:   31 SRKNAPVLKPNDFQKFPLIEKTRVSHNTCVYRFGLPRSTDRLGLPIGQHIAI-GATINDKEVVRSYTPISTDDELGYFDLLIKAYENGNISRHVESKKIGETIDIRGPKGFFTYTPGMVESFGMIAGGTGITPMYQILTAILRNPEDKTKVSLVYANVTEDDIL 193          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_MAGGR (NADH-cytochrome b5 reductase 1 OS=Magnaporthe grisea GN=CBR1 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.892e-38
Identity = 84/168 (50.00%), Postives = 110/168 (65.48%), Query Frame = 3
Query:  171 KPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGK----DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAIL--EKTQ*QTKVHLIYANVTYXDIL 656
            KPK  LDP  F+EF+L ++  +SHNVA +  +LP+P+S+LGLPIGQHIS        D   +EV++ YTP + D   G+ +L+IK YP G +S +   + VG  + V+GPKG F YQP  VR FGM AGG+GITPM QV RAI+        T+V LI+ANVT  DIL
Sbjct:   52 KPKKVLDPTKFQEFELKEKTIISHNVAIYRIQLPSPSSILGLPIGQHISIGADIPQPDGSSKEVVRSYTPISGDEQPGYVDLLIKSYPTGNISKYMAGLSVGQSIRVRGPKGAFVYQPNMVRHFGMIAGGTGITPMLQVVRAIVRGRAAGDTTQVDLIFANVTKEDIL 219          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_LACBS (NADH-cytochrome b5 reductase 1 OS=Laccaria bicolor (strain S238N-H82) GN=MCR1.1 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.892e-38
Identity = 81/167 (48.50%), Postives = 109/167 (65.27%), Query Frame = 3
Query:  156 LYSSKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +++S +PK  LDP  +KEF L K+ Q+S N A +TF+LP    VLGLPIGQHIS    D  G+ +++ YTP +  +  G FEL+IK Y +G +S H   +++GD L VKGPKG F+Y PG     GM AGG+G+ PM Q+ RAIL+    +T + LIYANV   DIL
Sbjct:   52 VFNSTRPK-PLDPSIWKEFPLQKKNQVSPNTAIYTFKLPHAEDVLGLPIGQHISVSA-DINGKNIVRSYTPISRQNARGRFELIIKTYEKGNISRHVASLKIGDTLRVKGPKGNFKYTPGLTAHLGMIAGGTGLAPMIQIVRAILQNPPDRTNITLIYANVNEEDIL 216          
BLAST of FC932241 vs. ExPASy Swiss-Prot
Match: NCB5R_PICGU (NADH-cytochrome b5 reductase 1 OS=Pichia guilliermondii GN=CBR1 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.471e-38
Identity = 80/164 (48.78%), Postives = 107/164 (65.24%), Query Frame = 3
Query:  165 SKKPKVSLDPENFKEFKLVKRLQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEKTQ*QTKVHLIYANVTYXDIL 656
            +KK    L P+ F++F L+++ +LSHN   + F LP  T  LGLPIGQHIS  G    G+EV++ YTP + D ++G+F+L+IK Y QG +S H     VGD++ V+GPKG F Y P  V   GM AGG+GI PM+QV  AIL     +TK+ L+YANVT  DIL
Sbjct:   31 NKKNGPVLKPDVFQKFPLIEKTRLSHNTCIYRFGLPKSTDRLGLPIGQHISI-GATINGKEVVRSYTPISRDDELGYFDLLIKTYEQGNISRHVDSKSVGDHIEVRGPKGFFTYTPNMVEHLGMIAGGTGIAPMYQVLTAILTNPDDKTKISLVYANVTEEDIL 193          
The following BLAST results are available for this feature:
BLAST of FC932241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
NCB5R_CANAL3.684e-4248.21NADH-cytochrome b5 reductase 1 OS=Candida albicans... [more]
NCB5R_KLULA2.388e-4150.30NADH-cytochrome b5 reductase 1 OS=Kluyveromyces la... [more]
NCB5R_LODEL6.948e-4148.78NADH-cytochrome b5 reductase 1 OS=Lodderomyces elo... [more]
NCB5R_PICST7.682e-4047.02NADH-cytochrome b5 reductase 1 OS=Pichia stipitis ... [more]
NCB5R_YARLI1.003e-3949.12NADH-cytochrome b5 reductase 1 OS=Yarrowia lipolyt... [more]
NCB5R_NEUCR3.812e-3950.58NADH-cytochrome b5 reductase 1 OS=Neurospora crass... [more]
NCB5R_DEBHA8.493e-3946.34NADH-cytochrome b5 reductase 1 OS=Debaryomyces han... [more]
NCB5R_MAGGR1.892e-3850.00NADH-cytochrome b5 reductase 1 OS=Magnaporthe gris... [more]
NCB5R_LACBS1.892e-3848.50NADH-cytochrome b5 reductase 1 OS=Laccaria bicolor... [more]
NCB5R_PICGU2.471e-3848.78NADH-cytochrome b5 reductase 1 OS=Pichia guillierm... [more]

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Properties
Property NameValue
Genbank descriptionC34206C01EF PostHarveN Citrus clementina cDNA clone C34206C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932241 ID=FC932241; Name=FC932241; organism=Citrus clementina; type=EST; length=658bp
TATATACATATATTGACAAATCCGAGGCTTTTAGTTCTTCTATTGGTGAG
CTTTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAGATGTTCA
GCTTCTCGTTGGTGGAGCTGTGGCTGTTCTGGCCATTGCTGTTGGTGCTG
CTTACTTGTATTCCTCTAAGAAGCCCAAAGTTTCCTTAGATCCTGAGAAT
TTCAAGGAGTTTAAGCTTGTCAAGCGATTACAGCTGAGCCATAATGTGGC
AAAGTTCACATTTGAACTCCCAACGCCTACATCGGTTTTGGGTCTTCCAA
TTGGACAACATATAAGTTGCAGGGGCAAGGATAGTCAGGGTGAAGAGGTT
ATTAAACCATATACCCCAACCACATTGGATTCTGATGTTGGTCATTTTGA
ATTGGTTATTAAGATGTACCCCCAAGGAAGGATGTCACACCATTTCCGTG
AGATGCGTGTTGGTGATTATCTTGCCGTGAAGGGACCCAAGGGTCGATTC
AGGTATCAACCTGGCCAGGTCAGAGCATTTGGGATGACTGCAGGAGGTTC
TGGCATCACTCCAATGTTCCAAGTTACTAGAGCCATATTAGAGAAAACCC
AATGACAGACAAAGGTGCACCTCATTTATGCCAATGTTACATATGANGAC
ATTCTTTT
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