FC932266

Overview
NameFC932266
Unique NameFC932266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_SERP5 (Flavoprotein wrbA OS=Serratia proteamaculans (strain 568) GN=wrbA PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 94/198 (47.47%), Postives = 121/198 (61.11%), Query Frame = 2
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLK 679
            K+ ++YYSMYGH+E LAE + +GA  V GVE  L +VPET+P E   K         P+ +P ELA+ DG +FG+PTRFG MA Q + FLD TGGLW +  L GK  G  +              +  T L HHG I VPIGY     +F++  V+GG+PYGA T A GDGSRQP++ EL  A +QG+H+A I  KLK
Sbjct:    3 KILVLYYSMYGHIETLAEAVAEGARRVSGVEVTLKRVPETIPAEAFAKAGGKQDQKAPVASPQELADYDGIIFGTPTRFGNMAGQMRTFLDQTGGLWASGALYGK-VGSVFSSTGTGGGQEHTITSTWTTLAHHGFIIVPIGYA-TPELFDVSHVRGGTPYGATTIAGGDGSRQPSQEELTIARYQGEHVAKITAKLK 198          
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_GEOSF (Flavoprotein wrbA OS=Geobacter sp. (strain FRC-32) GN=wrbA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.168e-44
Identity = 100/201 (49.75%), Postives = 121/201 (60.20%), Query Frame = 2
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK----SDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGICKKL 676
            KV +VYYSMYGH+ ++AE I +GA  V G E  L +VPETL  +VL KM A       S +PI T +ELAEAD  +FGSPTRFG M  Q + FLDATGGLW    L GK   +F              L+  T L+HHGM+ V + Y F  G    +++ GGSPYGA T AG  G RQPTE EL  A +QGKH+A I  KL
Sbjct:    2 KVLVVYYSMYGHIHRMAEAIVEGAKEVVGAEVVLRRVPETLSHDVLEKMGAVEAQRSMSHIPICTVDELAEADAVIFGSPTRFGNMCGQMRQFLDATGGLWVKGSLIGKVGSVFASSNTQHGGQESTILSFHTTLLHHGMVIVGLPYAF-QGQMRNDEITGGSPYGASTVAGTQGERQPTENELAAARYQGKHVASIAYKL 201          
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_YERPY (Flavoprotein wrbA OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=wrbA PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.992e-44
Identity = 94/199 (47.24%), Postives = 121/199 (60.80%), Query Frame = 2
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLKG 682
            K+ ++YYSMYGH+E LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG+PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I VPIGY     +F++ + +GG+PYGA T A GDGSRQP+  EL  A  QG+H+A I  KLKG
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKLKG 199          
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_YERPS (Flavoprotein wrbA OS=Yersinia pseudotuberculosis GN=wrbA PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.992e-44
Identity = 94/199 (47.24%), Postives = 121/199 (60.80%), Query Frame = 2
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLKG 682
            K+ ++YYSMYGH+E LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG+PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I VPIGY     +F++ + +GG+PYGA T A GDGSRQP+  EL  A  QG+H+A I  KLKG
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKLKG 199          
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_YERPP (Flavoprotein wrbA OS=Yersinia pestis (strain Pestoides F) GN=wrbA PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.992e-44
Identity = 94/199 (47.24%), Postives = 121/199 (60.80%), Query Frame = 2
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLKG 682
            K+ ++YYSMYGH+E LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG+PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I VPIGY     +F++ + +GG+PYGA T A GDGSRQP+  EL  A  QG+H+A I  KLKG
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKLKG 199          
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_YERPN (Flavoprotein wrbA OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=wrbA PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.992e-44
Identity = 94/199 (47.24%), Postives = 121/199 (60.80%), Query Frame = 2
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLKG 682
            K+ ++YYSMYGH+E LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG+PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I VPIGY     +F++ + +GG+PYGA T A GDGSRQP+  EL  A  QG+H+A I  KLKG
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKLKG 199          
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_YERPG (Flavoprotein wrbA OS=Yersinia pestis bv. Antiqua (strain Angola) GN=wrbA PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.992e-44
Identity = 94/199 (47.24%), Postives = 121/199 (60.80%), Query Frame = 2
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLKG 682
            K+ ++YYSMYGH+E LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG+PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I VPIGY     +F++ + +GG+PYGA T A GDGSRQP+  EL  A  QG+H+A I  KLKG
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKLKG 199          
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_YERPE (Flavoprotein wrbA OS=Yersinia pestis GN=wrbA PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.992e-44
Identity = 94/199 (47.24%), Postives = 121/199 (60.80%), Query Frame = 2
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLKG 682
            K+ ++YYSMYGH+E LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG+PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I VPIGY     +F++ + +GG+PYGA T A GDGSRQP+  EL  A  QG+H+A I  KLKG
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKLKG 199          
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_YERPB (Flavoprotein wrbA OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=wrbA PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.992e-44
Identity = 94/199 (47.24%), Postives = 121/199 (60.80%), Query Frame = 2
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLKG 682
            K+ ++YYSMYGH+E LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG+PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I VPIGY     +F++ + +GG+PYGA T A GDGSRQP+  EL  A  QG+H+A I  KLKG
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKLKG 199          
BLAST of FC932266 vs. ExPASy Swiss-Prot
Match: WRBA_YERPA (Flavoprotein wrbA OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=wrbA PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.992e-44
Identity = 94/199 (47.24%), Postives = 121/199 (60.80%), Query Frame = 2
Query:   89 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGSPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGICKKLKG 682
            K+ ++YYSMYGH+E LA  I +GA  V GV+  + +VPET+P E   K         P+ TP+ELA+ DG +FG+PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHG I VPIGY     +F++ + +GG+PYGA T A GDGSRQP+  EL  A  QG+H+A I  KLKG
Sbjct:    3 KILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITST-WTTLAHHGFIIVPIGYG-AKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKLKG 199          
The following BLAST results are available for this feature:
BLAST of FC932266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_SERP56.846e-4547.47Flavoprotein wrbA OS=Serratia proteamaculans (stra... [more]
WRBA_GEOSF1.168e-4449.75Flavoprotein wrbA OS=Geobacter sp. (strain FRC-32)... [more]
WRBA_YERPY1.992e-4447.24Flavoprotein wrbA OS=Yersinia pseudotuberculosis s... [more]
WRBA_YERPS1.992e-4447.24Flavoprotein wrbA OS=Yersinia pseudotuberculosis G... [more]
WRBA_YERPP1.992e-4447.24Flavoprotein wrbA OS=Yersinia pestis (strain Pesto... [more]
WRBA_YERPN1.992e-4447.24Flavoprotein wrbA OS=Yersinia pestis bv. Antiqua (... [more]
WRBA_YERPG1.992e-4447.24Flavoprotein wrbA OS=Yersinia pestis bv. Antiqua (... [more]
WRBA_YERPE1.992e-4447.24Flavoprotein wrbA OS=Yersinia pestis GN=wrbA PE=3 ... [more]
WRBA_YERPB1.992e-4447.24Flavoprotein wrbA OS=Yersinia pseudotuberculosis s... [more]
WRBA_YERPA1.992e-4447.24Flavoprotein wrbA OS=Yersinia pestis bv. Antiqua (... [more]

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Properties
Property NameValue
Genbank descriptionC34206F05EF PostHarveN Citrus clementina cDNA clone C34206F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932266 ID=FC932266; Name=FC932266; organism=Citrus clementina; type=EST; length=702bp
GGAATCCATTTTTTCAAACTTTTTTTTTATATATAGAGAGAAAAGTAACA
GAGACTCGTCGAAGAAGACTCCTTAAGAGATGGCAACCAAAGTGTATATT
GTGTACTATTCCATGTATGGACATGTAGAGAAACTGGCAGAAGAGATAAA
GAAAGGAGCTTCATCTGTTGAGGGTGTTGAAGCCAAATTATGGCAGGTCC
CTGAGACACTACCTGAGGAGGTACTTGGTAAGATGAGTGCACCACCAAAG
AGTGATGTACCTATTATTACCCCCAACGAACTTGCTGAGGCTGATGGGTT
TGTTTTTGGCTCCCCAACAAGATTTGGAATGATGGCTGCTCAATTTAAAG
CATTTTTAGATGCTACTGGTGGTCTATGGAGGACACAACAGCTCGCTGGC
AAACCTGCTGGGATGTTCTACAGCACTGGGTCACAAGGTGGTGGACAAGA
GACTACAGCGTTGACGGCAATTACTCAGCTTGTTCACCATGGGATGATAT
TTGTTCCTATTGGATACACATTTGGTGCTGGCATGTTTGAGATGGAGAAA
GTGAAAGGTGGAAGTCCCTACGGTGCAGGAACTTTTGCTGGAGATGGCTC
GAGACAGCCAACTGAGCTTGAGTTGGAGCAAGCTTTCCACCAGGGAAAAC
ACATTGCGGGCATTTGCAAGAAGCTGAAGGGAAGTGCTTAAATATTTCAA
TT
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