FC932268
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932268 vs. ExPASy Swiss-Prot
Match: VAR3_ARATH (Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana GN=VAR3 PE=1 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 4.522e-36 Identity = 76/92 (82.61%), Postives = 84/92 (91.30%), Query Frame = 1 Query: 337 GKSLEGSAVKELDPLDMSEEAKAERWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQRYRRNLPIVSSEPVKK 612 GKSLEGS VKE D LDMSEEAKAERWF+RVA+IK+ISELS+IPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQR++RN I +S+P K Sbjct: 664 GKSLEGSLVKESDLLDMSEEAKAERWFKRVAEIKNISELSEIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQRHQRNPHITNSDPTGK 755 HSP 2 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 66/196 (33.67%), Postives = 96/196 (48.98%), Query Frame = 1 Query: 16 HTENQQLGSGRWNSKSSGENVEGMKTGSSAHETCINTNSTGKNFNSLPTNNKNWSSG-YSGKEMTNSAWNSNQPAENQSNGYSTKENTNFATSTSQPAE-----NQNVRSSWTGKSLEGSAVKELDPLDMSEEAKAE--RWFRRVAQIKDISEL-SQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQRYRR 576 +TEN+ G NSK S +N G KT S +E +++S +++KN SS + + N+ + P + KE T + + NQNV KS + KE D L+ + E RWF+RV ++ ++S+L S IP E P MPMRKG NRFVVS++K +R LTS Y+R Sbjct: 417 NTENRVATDG--NSKRSDDNALGSKTTRSLNEILGSSSSLTSR-----SDDKNVSSRRFESSQGINTDFVPFVPLPSDMFAKKPKEETQIGLIDNIQVDGFSGGNQNVYQE--DKSDANHSGKETDRLEKEDHKSEEPARWFKRVTELHNVSDLESAIPQEISPEKMPMRKGENRFVVSRKK---DRSLTSPAYKR 600 HSP 3 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 44/101 (43.56%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 325 SSWTGKSLEGSAVKELDPLDMSEEAKAERWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQRYRRNLPIVSSEPVKKESDSS 627 SS + + S+ EL+ + E KA+RW +VAQ + S DEDFP IMP+RKGVNR+VVS RK PLERRL + R V+++ K SD + Sbjct: 340 SSLNSANSDYSSDPELERRLVENEKKAQRWLSKVAQGGSDAN-SVDTDEDFPEIMPLRKGVNRYVVSTRKPPLERRLANTENR-----VATDGNSKRSDDN 434 The following BLAST results are available for this feature:
BLAST of FC932268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932268 ID=FC932268; Name=FC932268; organism=Citrus clementina; type=EST; length=706bpback to top |