FC932282

Overview
NameFC932282
Unique NameFC932282
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10285 contig Ccv1_Contig10285:2..714. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932282 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 7.362e-95
Identity = 161/220 (73.18%), Postives = 189/220 (85.91%), Query Frame = 2
Query:   59 MANE-VVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLNHNGRPFCESPIIVQYIDEVWKDKAP-LLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGEEQEAAMKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKEVLEFVSAMKTNLGL 712
            MANE V+LLDFWPSMFG+R+RIALAEK +KYEYKEEDL+NKSPLLLQMNP+HKKIPVL HNG+P CES I V+YI+EVWKDKAP LLPSDPY RAQARFW D+IDKK+YD  RK WTTKGEEQEAA K+F E LK LEG LGDKP+FGG++FG+VD++LI +Y WFY YET G F+ EAECPKF+AW KRC+QRE+VA++LPD  +VLEFV  ++   GL
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGESFGFVDIALIGYYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFGL 220          
BLAST of FC932282 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 6.233e-94
Identity = 159/220 (72.27%), Postives = 188/220 (85.45%), Query Frame = 2
Query:   59 MANE-VVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLNHNGRPFCESPIIVQYIDEVWKDKAP-LLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGEEQEAAMKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKEVLEFVSAMKTNLGL 712
            MANE V+LLDFWPSMFG+R+RIALAEK +KYEYK+EDL+NKSPLLLQMNP+HKKIPVL HNG+P CES I V+YI+EVWKDKAP LLPSDPY RAQARFW D+IDKK+YD  RK W TKGEEQEAA K+F E LK LEG LGD+P+FGG++FG+VD++LI FY WFY YET G F+ EAECPKF+AW KRC+QRE+VA++LPD  +VLEFV  ++   GL
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGESFGFVDIALIGFYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFGL 220          
BLAST of FC932282 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.178e-84
Identity = 142/216 (65.74%), Postives = 172/216 (79.63%), Query Frame = 2
Query:   59 MANEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLNHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGEEQEAAMKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKEVLEFVSAMKTNL 706
            M++EVVLLD W SM+G+R RIALAEKGV+YEYKEE+L N+SPLLLQMNP+HKKIPVL HNG+P CES IIVQYIDEVW DK+PL+PSDPY+R+QARFWVD+IDKK+YD+ +K W +KGEE E   KE   + K LE  L DKPF+G D FG+VDL LI F  WFYTYET G F +E ECPK +AWVKRC++RETV+  LPD K+V   +  ++  L
Sbjct:    1 MSDEVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEETLTDKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKMEEECPKLMAWVKRCMERETVSNTLPDAKKVYGLIVELQKTL 216          
BLAST of FC932282 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.222e-83
Identity = 136/217 (62.67%), Postives = 176/217 (81.11%), Query Frame = 2
Query:   62 ANEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLNHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGEEQEAAMKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKEVLEFVSAMKTNLGL 712
            +N VVLLDFWPS FG+R+RIALA KG+KYE KEE+L +KSPLLL+MNPVHKKIP+L HN +  CES  I++YIDEVW DK PLLPSDPY+R+QARFW D+IDKK+Y + R+ W+ KGE+QE A KEF E+LKTLEG+LG+K +FGGDN G+VD++L+PF  WFY+YETC  F++EAECPK + W K C++ E+V+++LP   ++  FV  +K  LGL
Sbjct:    3 SNNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSIEAECPKLVVWAKTCMESESVSKSLPHPHKIYGFVLELKHKLGL 219          
BLAST of FC932282 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.671e-78
Identity = 131/217 (60.37%), Postives = 173/217 (79.72%), Query Frame = 2
Query:   62 ANEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLNHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGEEQEAAMKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKEVLEFVSAMKTNLGL 712
            +N VVLLDF  S FG+R+RIALA KG+KYE KEE+L +KSPLLL+MNPVHKKIP+L HNG+P CES  I++YIDEVW +K PLLPSDPYQR+QARFW ++ID K+Y + R+ W+ KGE+QE A KEF E+ KTLEG+LG+K +FGGDN G+VD++L+PF  WFY+YETC  F++EAEC K + W + C++ E V+++LP   ++ +FV  +K  LGL
Sbjct:    3 SNNVVLLDFSGSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSIEAECRKLVVW-QNCMENERVSKSLPHPHKIYDFVLELKHKLGL 218          
BLAST of FC932282 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 9.084e-61
Identity = 113/225 (50.22%), Postives = 153/225 (68.00%), Query Frame = 2
Query:   68 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLNHNGRPFCESPIIVQYIDEVWKDKAPLLP-------SDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGEEQEAAMKEFFEVLKTLEGQLGDKPFF---GGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKEVLEFVSAMKTNLGL 712
            E+VLLDFW S FG R RIA+AEKG+++EY+EEDL NKS LLL+ NPVH+KIPVL H GRP  ES +I+QY+D+ +     LLP          Y RA ARFW D++D+K+YD   + W  KGE Q AA +E  E+L+TLE +LGD+ FF   GG   G+VD++L+PF  WFY+YE CG F+VE   P+  AW +RC + ++V + LP  ++V +FV  +K   G+
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKYGV 230          
BLAST of FC932282 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.024e-60
Identity = 114/225 (50.67%), Postives = 156/225 (69.33%), Query Frame = 2
Query:   68 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLNHNGRPFCESPIIVQYIDEVWKDKAPLL-PSD------PYQRAQARFWVDFIDKKMYDSLRKTWTTKGEEQEAAMKEFFEVLKTLEGQLGDKPFF---GGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAQALPDGKEVLEFVSAMKTNLGL 712
            E+VLLDFW S FG R RIA+AEKG+++EY+EEDL NKS LLL+ NPVH+KIPVL H GRP  ES +I+QY+D+ +     LL P++       Y RA ARFW D++D+K+YD   + W  KGE Q AA +E  E+L+TLE +LGD+ FF   GG   G+VD++L+PF  WFY+YE CG F+VE   P+  AW +RC + ++VA+ LP  ++V +FV  +K   G+
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVAKHLPSPEKVYDFVGVLKKKYGV 230          
BLAST of FC932282 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.936e-43
Identity = 100/210 (47.62%), Postives = 129/210 (61.43%), Query Frame = 2
Query:   68 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLNHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGEEQEAAMKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYET-CGKFNVEAE-CPKFIAWVKRCLQRETVAQALPDGKEVLEFVSA 691
            EV LL FW S F  RV  AL  KGVKYEY EED  NKS LLLQ NPV+KK+PVL HNG+P  ES II++YIDE ++  + +LP DPY RA ARFW  F+D K+  ++  T+  KGEEQE   +E +E+LK L+ +L DK FF GD FG+ D++      W   +E   G   V++E  P F  W    +    V ++LP   E+L F  A
Sbjct:    3 EVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPS-ILPKDPYDRALARFWAKFLDDKV-AAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAFFRA 210          
BLAST of FC932282 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.239e-42
Identity = 99/210 (47.14%), Postives = 127/210 (60.48%), Query Frame = 2
Query:   68 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLNHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGEEQEAAMKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYET-CGKFNVEAE-CPKFIAWVKRCLQRETVAQALPDGKEVLEFVSA 691
            EV LL FW S F  RV  AL  KGVKYEY EED  NKS LLLQ NPVHKK+PVL HNG+P  ES +I++YIDE ++  + +LP DPY RA ARFW  F+  K+  ++  T+  KGEEQE   +E +E+LK L+ +L DK FF GD FG+ D++      W   +E   G   V +E  P F  W    +    V ++LP   E+L F  A
Sbjct:    3 EVKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETFEGPS-ILPKDPYDRALARFWSKFLGDKV-AAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDELLAFFRA 210          
BLAST of FC932282 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.239e-42
Identity = 98/208 (47.12%), Postives = 129/208 (62.02%), Query Frame = 2
Query:   68 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLNHNGRPFCESPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSLRKTWTTKGEEQEAAMKEFFEVLKTLEGQLGDKPFFGGDNFGYVDL--SLIPFYCWFYTYETCGKFNVEAE-CPKFIAWVKRCLQRETVAQALPDGKEVLEF 682
            EV LL FW S F  RV  AL  KGVKYEY EED  NKS LLLQ NP+HKK+PVL HNG+   ES +I++YIDE ++  + +LP DPY RA ARFW  F+D K+  ++ KT+  KGEEQE   +E  E+LK L+ +L DK FF GD FG+ D+  +L+ F+   +  E  G   V +E  P F  W    +    + ++LP   E+L F
Sbjct:    3 EVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPS-ILPKDPYDRALARFWAKFLDDKV-PAVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGDKFGFADIAANLVAFWLGVFE-EASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAF 207          
The following BLAST results are available for this feature:
BLAST of FC932282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
GSTX4_TOBAC7.362e-9573.18Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC6.233e-9472.27Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX3_SOYBN1.178e-8465.74Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTXA_TOBAC2.222e-8362.67Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX1_NICPL3.671e-7860.37Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTU1_ORYSJ9.084e-6150.22Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI2.024e-6050.67Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_TOBAC2.936e-4347.62Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC4.239e-4247.14Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC4.239e-4247.12Probable glutathione S-transferase OS=Nicotiana ta... [more]

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Properties
Property NameValue
Genbank descriptionC34206H06EF PostHarveN Citrus clementina cDNA clone C34206H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932282 ID=FC932282; Name=FC932282; organism=Citrus clementina; type=EST; length=713bp
GGTGTTTGTCTTGTCTTTTCATTTATTCACTCTTGACTCTTAGTAAGCTT
CTGTCACAATGGCGAACGAAGTGGTTCTGTTGGATTTCTGGCCCAGCATG
TTTGGGATAAGGGTCAGGATTGCTCTGGCGGAGAAAGGCGTCAAGTATGA
GTACAAGGAAGAGGACTTGAAGAACAAGAGCCCCCTGCTTCTGCAGATGA
ACCCCGTTCACAAGAAGATCCCGGTTCTCAACCACAACGGCAGACCGTTC
TGTGAGTCACCCATCATTGTTCAGTACATTGACGAAGTGTGGAAGGACAA
GGCTCCATTGCTTCCCTCTGATCCCTACCAGAGAGCTCAAGCTAGGTTCT
GGGTAGATTTCATTGACAAGAAGATGTACGATTCTTTGAGGAAGACATGG
ACCACAAAGGGAGAAGAGCAGGAGGCAGCTATGAAGGAGTTCTTTGAAGT
TCTGAAGACTTTGGAAGGGCAGCTTGGAGACAAGCCTTTCTTCGGAGGAG
ACAATTTTGGGTATGTGGATTTAAGTTTGATCCCATTCTATTGTTGGTTT
TACACGTATGAGACATGTGGAAAGTTCAACGTCGAGGCTGAGTGCCCCAA
GTTCATAGCTTGGGTGAAGAGATGCTTGCAGAGGGAGACTGTTGCCCAGG
CACTTCCTGATGGGAAAGAAGTGCTTGAATTTGTTTCAGCGATGAAGACA
AATTTAGGATTGG
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