FC932283

Overview
NameFC932283
Unique NameFC932283
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9394 contig Ccv1_Contig9394:786..1507. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932283 vs. ExPASy Swiss-Prot
Match: UAP1_ARATH (Probable UDP-N-acetylglucosamine pyrophosphorylase OS=Arabidopsis thaliana GN=At2g35020 PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 6.361e-98
Identity = 130/168 (77.38%), Postives = 145/168 (86.31%), Query Frame = 3
Query:  222 VAKAPDGNGGLYSALKSSKLFEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEXXXXXXXXXXXXPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPY 725
            ++KAPDGNGG+Y+ALKSS+L EDMA+RGIKY+DCYGVDN LVRVADPTFLGYFIDK  ++ AKVVRKAYPQE            PLTVVEY+ELD S+ASA NQ+TGRL++CWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSI+G  VG KLEQFIFD FPY
Sbjct:  243 LSKAPDGNGGVYTALKSSRLLEDMASRGIKYVDCYGVDNVLVRVADPTFLGYFIDKSAASAAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYTELDQSMASATNQQTGRLQYCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSINGDIVGLKLEQFIFDCFPY 410          

HSP 2 Score: 106.686 bits (265), Expect = 6.361e-98
Identity = 47/71 (66.20%), Postives = 57/71 (80.28%), Query Frame = 2
Query:    2 LAAQVTSEGGGSGSALIHWYIMTSPFTDDATRKYFESHKYFGLESDQDTFFQQGTIPCVSKDGRFIMETPY 214
            LA+Q  SE   +    I WYIMTSPFT + T+K+F+SHKYFGLE DQ TFFQQGT+PC+SKDG+FIMETP+
Sbjct:  171 LASQAMSEASPTRPVTIQWYIMTSPFTHEPTQKFFKSHKYFGLEPDQVTFFQQGTLPCISKDGKFIMETPF 241          
BLAST of FC932283 vs. ExPASy Swiss-Prot
Match: UAP1L_XENTR (UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Xenopus tropicalis GN=uap1l1 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.933e-45
Identity = 78/177 (44.07%), Postives = 100/177 (56.50%), Query Frame = 3
Query:  219 QVAKAPDGNGGLYSALKSSKLFEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEXXXXXXXXXXXXPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSI--HGQTV------GFKLEQFIFDAFPY 725
            ++A APDGNGGLY AL  +++ EDM  RGI+Y+  Y VDN LV++ADP F+G+ + KG   GAKVV K YP E               VVEYSE+ P  A   N   G L F   N+C H FT+ FL  V   LE    YH+A KK+P +   G  V      G K+E+F+FD F +
Sbjct:  224 KLAMAPDGNGGLYRALSDNRILEDMEGRGIQYVHVYCVDNILVKMADPVFIGFCVSKGADCGAKVVEKGYPAEPVGVVCRVDGV--YQVVEYSEISPETAEKRN-PNGALTFTAGNICNHFFTVPFLRAVIGSLEPRLNYHVAIKKVPYVDNEGNLVKPTSPNGIKMEKFVFDVFQF 397          

HSP 2 Score: 61.2326 bits (147), Expect = 6.933e-45
Identity = 32/69 (46.38%), Postives = 39/69 (56.52%), Query Frame = 2
Query:   11 QVTSEGGGSGSALIHWYIMTSPFTDDATRKYFESHKYFGLESDQDTFFQQGTIPCVSKDGRFIMETPYK 217
            Q+ SE  G  +  + WYIMTS FT   TRK+FE H YFGLE      F+Q  +P V  DG  I+E   K
Sbjct:  157 QLASERHGE-TCTVPWYIMTSEFTLGPTRKFFEDHAYFGLERSDVVMFEQRMLPAVGFDGAAILEDKAK 224          
BLAST of FC932283 vs. ExPASy Swiss-Prot
Match: UAP1_DICDI (Probable UDP-N-acetylglucosamine pyrophosphorylase OS=Dictyostelium discoideum GN=uap1 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.586e-40
Identity = 70/179 (39.11%), Postives = 106/179 (59.22%), Query Frame = 3
Query:  216 NQVAKAPDGNGGLYSALKSSKLFEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEXXXXXXXXXXXXPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIH---------GQTVGFKLEQFIFDAFPY 725
            ++++ +P+GNGGL+ AL +S   +DM  +GIKY+  Y VDN L+ +ADP F+GY  D+    GAKVV K+ P+E            P  V+EYSE+D   +     + G+L F ++++C++ F+ DFL+++A        YH+A KKIPS H             G+KLE+FIFD FP+
Sbjct:  217 SKLSLSPNGNGGLFKALSTSGAIDDMRKKGIKYVTQYCVDNILINMADPVFVGYMHDQSADCGAKVVSKSDPKEPVGVMALNGDGKPF-VLEYSEIDEQ-SKFKKDQNGQLVFNYAHICINAFSFDFLDRIAKNHLDHLKYHVAFKKIPSAHPISGERQSPSSPNGWKLEKFIFDVFPF 393          

HSP 2 Score: 55.4546 bits (132), Expect = 3.586e-40
Identity = 27/57 (47.37%), Postives = 35/57 (61.40%), Query Frame = 2
Query:   50 IHWYIMTSPFTDDATRKYFESHKYFGLESDQDTFFQQGTIPCVS-KDGRFIMETPYK 217
            I WYIMTS  T   T K+FE+  YFGL+     FF Q  IPC++ +DG+ I E+  K
Sbjct:  162 IQWYIMTSEATHSETIKFFENKNYFGLKKSAFFFFSQAMIPCITPEDGKIISESGSK 218          
BLAST of FC932283 vs. ExPASy Swiss-Prot
Match: UAP1_CANAL (UDP-N-acetylglucosamine pyrophosphorylase OS=Candida albicans GN=UAP1 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.219e-38
Identity = 70/182 (38.46%), Postives = 105/182 (57.69%), Query Frame = 3
Query:  216 NQVAKAPDGNGGLYSALKSSKLFEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEXXXXXXXXXXXXPLTVVEYSELDPSLASAIN-QETGRLRFCWSNVCLHMFTLDFLNQVAN---GLEKDSVYHLAEKKIPSIH---------GQTVGFKLEQFIFDAFP 722
            N + ++PDGNGGLY ALK + + +D+ ++GIK+I  Y VDN LV+VADP F+G+ I K      KVVRK    E               V+EYSE+   LA+  + Q++ +L    +N+  H ++++FLN++       +K   +H+A+KKIPS++          +  G KLEQFIFD FP
Sbjct:  218 NSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCVDNCLVKVADPIFIGFAIAKKFDLATKVVRKRDANESVGLIVLDQDNQKPCVIEYSEISQELANKKDPQDSSKLFLRAANIVNHYYSVEFLNKMIPKWISSQKYLPFHIAKKKIPSLNLENGEFYKPTEPNGIKLEQFIFDVFP 399          

HSP 2 Score: 57.3806 bits (137), Expect = 3.219e-38
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 2
Query:   47 LIHWYIMTSPFTDDATRKYFESHKYFGLESDQDTFFQQGTIPCVSKDGRFIM 202
            +I+WYIMTS  T +AT  +F  + YFGL S Q  FF QGT+PC +  G  I+
Sbjct:  162 IINWYIMTSGPTRNATESFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKIL 213          
BLAST of FC932283 vs. ExPASy Swiss-Prot
Match: UAP1_YEAST (UDP-N-acetylglucosamine pyrophosphorylase OS=Saccharomyces cerevisiae GN=UAP1 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.377e-36
Identity = 67/175 (38.29%), Postives = 95/175 (54.29%), Query Frame = 3
Query:  222 VAKAPDGNGGLYSALKSSKLFEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEXXXXXXXXXXXXPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQT---------VGFKLEQFIFDAF 719
            ++++PDGNGGLY A+K +KL ED   RGIK++  Y VDN L ++ADP F+G+ I  G     K VRK    E               V+EYSE+   LA A +++ G L+    N+  H + +D L +  +   ++  YH+A+KKIP+    T          G KLEQFIFD F
Sbjct:  215 LSQSPDGNGGLYRAIKENKLNEDFDRRGIKHVYMYCVDNVLSKIADPVFIGFAIKHGFELATKAVRKRDAHESVGLIATKNEKP--CVIEYSEISNELAEAKDKD-GLLKLRAGNIVNHYYLVDLLKRDLDQWCENMPYHIAKKKIPAYDSVTGKYTKPTEPNGIKLEQFIFDVF 386          

HSP 2 Score: 60.4622 bits (145), Expect = 6.377e-36
Identity = 29/55 (52.73%), Postives = 35/55 (63.64%), Query Frame = 2
Query:   50 IHWYIMTSPFTDDATRKYFESHKYFGLESDQDTFFQQGTIPCVSKDGR-FIMETP 211
            I WYIMTS  T  AT  YF+ H YFGL  +Q TFF QGT+P     G+ F+M+ P
Sbjct:  158 IPWYIMTSGPTRAATEAYFQEHNYFGLNKEQITFFNQGTLPAFDLTGKHFLMKDP 212          
BLAST of FC932283 vs. ExPASy Swiss-Prot
Match: UAP1L_DANRE (UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Danio rerio GN=uap1l1 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.321e-30
Identity = 71/178 (39.89%), Postives = 97/178 (54.49%), Query Frame = 3
Query:  216 NQVAKAPDGNGGLYSALKSSKLFEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEXXXXXXXXXXXXPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQ--------TVGFKLEQFIFDAFPY 725
            N++A APDGNGGLY +L  +K+  DM  R ++++  Y VDN LV++ADP F+G+ +  G   GAKVV KAYP E               V+EYSE+ P  A  +    G L F   N+C H FT  FL  VA   E     H+A KK+P + G+          G K+E+F+FD F +
Sbjct:  216 NKIAMAPDGNGGLYRSLVDNKILADMERRNVEFLHVYCVDNILVKMADPVFIGFCVTNGADCGAKVVEKAYPAEPVGVVCRVDGV--YQVIEYSEIQPETAE-LRGSGGELVFSAGNICNHFFTRSFLRDVAEKFESKLKQHVAIKKVPFVDGEGNLVKPTKPNGIKMEKFVFDVFQF 390          
BLAST of FC932283 vs. ExPASy Swiss-Prot
Match: UAP1_HUMAN (UDP-N-acetylhexosamine pyrophosphorylase OS=Homo sapiens GN=UAP1 PE=1 SV=3)

HSP 1 Score: 132.494 bits (332), Expect = 2.253e-30
Identity = 81/179 (45.25%), Postives = 103/179 (57.54%), Query Frame = 3
Query:  216 NQVAKAPDGNGGLYSALKSSKLFEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEXXXXXXXXXXXXPLTVVEYSELDPSLASAINQET-GRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSI--HGQTV------GFKLEQFIFDAFPY 725
            N+V+ APDGNGGLY AL +  + EDM  RGI  I  Y VDN LV+VADP F+G+ I KG   GAKVV K  P E               VVEYSE+  SLA+A  + + GRL F   N+  H FT+ FL  V N  E    +H+A+KKIP +   GQ +      G K+E+F+FD F +
Sbjct:  214 NKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGV--YQVVEYSEI--SLATAQKRSSDGRLLFNAGNIANHFFTVPFLRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEKFVFDIFQF 388          
BLAST of FC932283 vs. ExPASy Swiss-Prot
Match: UAP1L_MOUSE (UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus GN=Uap1l1 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.253e-30
Identity = 74/178 (41.57%), Postives = 102/178 (57.30%), Query Frame = 3
Query:  216 NQVAKAPDGNGGLYSALKSSKLFEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEXXXXXXXXXXXXPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSI--HGQTV------GFKLEQFIFDAFPY 725
            ++VA APDGNGGLY AL   ++ EDM  RG++++  Y VDN LVR+ADP F+G+ + +G   GAKVV KAYP+E               VVEYSE+ P +A  +  + G L +   N+C H FT  FL+ V    E     H+A KK+P +   G  V      G K+E+F+FD F +
Sbjct:  217 DKVAMAPDGNGGLYCALADHQILEDMKQRGVEFVHVYCVDNILVRLADPVFIGFCVLQGADCGAKVVEKAYPEEPVGVVCQVDGVP--QVVEYSEISPEIAGQLGAD-GGLLYNAGNICNHFFTRGFLDVVTREFEPLLRLHVAMKKVPYVDEEGNLVKPLRPNGIKMEKFVFDVFQF 391          
BLAST of FC932283 vs. ExPASy Swiss-Prot
Match: UAP1L_HUMAN (UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Homo sapiens GN=UAP1L1 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.253e-30
Identity = 75/178 (42.13%), Postives = 100/178 (56.18%), Query Frame = 3
Query:  216 NQVAKAPDGNGGLYSALKSSKLFEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEXXXXXXXXXXXXPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSI--HGQTV------GFKLEQFIFDAFPY 725
            ++VA APDGNGGLY AL+  K+ EDM  RG++++  Y VDN LVR+ADP F+G+ + +G   GAKVV KAYP+E               VVEYSE+ P  A  +    G L +   N+C H FT  FL  V    E     H+A KK+P +   G  V      G K+E+F+FD F +
Sbjct:  217 DKVAMAPDGNGGLYCALEDHKILEDMERRGVEFVHVYCVDNILVRLADPVFIGFCVLQGADCGAKVVEKAYPEEPVGVVCQVDGVP--QVVEYSEISPETAQ-LRASDGSLLYNAGNICNHFFTRGFLKAVTREFEPLLKPHVAVKKVPYVDEEGNLVKPLKPNGIKMEKFVFDVFRF 391          
BLAST of FC932283 vs. ExPASy Swiss-Prot
Match: UAP1_MOUSE (UDP-N-acetylhexosamine pyrophosphorylase OS=Mus musculus GN=Uap1 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.943e-30
Identity = 80/179 (44.69%), Postives = 101/179 (56.42%), Query Frame = 3
Query:  216 NQVAKAPDGNGGLYSALKSSKLFEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEXXXXXXXXXXXXPLTVVEYSELDPSLASAINQET-GRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTV--------GFKLEQFIFDAFPY 725
            N+V+ APDGNGGLY AL +  + EDM  RGI  I  Y VDN LV+VADP F+G+ I KG   GAKVV K  P E               VVEYSE+  SLA+A  + + GRL F   N+  H FT+ FL  V N  E    +H+A+KKIP +  Q          G K+E+F+FD F +
Sbjct:  214 NKVSMAPDGNGGLYRALAAQNIVEDMEQRGICSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGV--YQVVEYSEI--SLATAQRRSSDGRLLFNAGNIANHFFTVPFLKDVVNVYEPQLQHHVAQKKIPYVDSQGYFIKPDKPNGIKMEKFVFDIFQF 388          
The following BLAST results are available for this feature:
BLAST of FC932283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
UAP1_ARATH6.361e-9877.38Probable UDP-N-acetylglucosamine pyrophosphorylase... [more]
UAP1L_XENTR6.933e-4544.07UDP-N-acetylhexosamine pyrophosphorylase-like prot... [more]
UAP1_DICDI3.586e-4039.11Probable UDP-N-acetylglucosamine pyrophosphorylase... [more]
UAP1_CANAL3.219e-3838.46UDP-N-acetylglucosamine pyrophosphorylase OS=Candi... [more]
UAP1_YEAST6.377e-3638.29UDP-N-acetylglucosamine pyrophosphorylase OS=Sacch... [more]
UAP1L_DANRE1.321e-3039.89UDP-N-acetylhexosamine pyrophosphorylase-like prot... [more]
UAP1_HUMAN2.253e-3045.25UDP-N-acetylhexosamine pyrophosphorylase OS=Homo s... [more]
UAP1L_MOUSE2.253e-3041.57UDP-N-acetylhexosamine pyrophosphorylase-like prot... [more]
UAP1L_HUMAN2.253e-3042.13UDP-N-acetylhexosamine pyrophosphorylase-like prot... [more]
UAP1_MOUSE2.943e-3044.69UDP-N-acetylhexosamine pyrophosphorylase OS=Mus mu... [more]

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Properties
Property NameValue
Genbank descriptionC34206H07EF PostHarveN Citrus clementina cDNA clone C34206H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932283 ID=FC932283; Name=FC932283; organism=Citrus clementina; type=EST; length=726bp
GCTTGCTGCTCAAGTTACGAGTGAGGGTGGAGGTTCTGGTTCAGCATTGA
TACATTGGTATATAATGACCAGCCCATTTACTGACGATGCCACACGCAAA
TATTTTGAGAGCCACAAGTACTTTGGTCTTGAATCGGATCAAGACACCTT
CTTCCAGCAGGGCACCATACCTTGTGTTTCTAAGGATGGTAGATTTATTA
TGGAGACTCCATACAAACCAGGTTGCTAAGGCTCCAGATGGAAATGGAGG
ACTCTATTCAGCTCTGAAATCATCAAAATTATTCGAAGACATGGCTACGA
GAGGGATTAAATACATAGATTGCTATGGAGTTGACAATGCGCTGGTTCGC
GTGGCTGATCCTACTTTCTTGGGATATTTTATTGATAAAGGTGTCTCTGC
TGGTGCAAAAGTTGTCCGCAAGGCATACCCCCAAGAAAAAGTTGGTGTTT
TTGTAAGACGAGGTAAAGGTGGACCTCTTACTGTTGTTGAGTACAGTGAA
TTAGATCCATCACTGGCTTCTGCAATCAATCAGGAGACTGGACGTCTTCG
TTTTTGTTGGAGTAATGTTTGCTTACACATGTTTACTTTGGATTTCCTAA
ACCAAGTGGCTAATGGCCTCGAAAAAGACAGTGTTTACCATCTTGCTGAG
AAAAAGATACCTTCTATCCACGGCCAAACTGTGGGATTCAAGCTAGAGCA
GTTCATATTTGATGCATTTCCTTATG
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