FC932289

Overview
NameFC932289
Unique NameFC932289
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932289 vs. ExPASy Swiss-Prot
Match: CMTA5_ARATH (Calmodulin-binding transcription activator 5 OS=Arabidopsis thaliana GN=CMTA5 PE=2 SV=2)

HSP 1 Score: 325.479 bits (833), Expect = 1.706e-88
Identity = 150/212 (70.75%), Postives = 183/212 (86.32%), Query Frame = 3
Query:   54 LVGSEIHGFHTLKDLDVANMMEEAKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKRKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHYRETHE--GTPATPPNSHSSSISDQSAPLLLSEEFNSGAGHAYSAGGKELQAPNESLTVQNHEMRLHELNTLEWDDLVV 683
            L+GSEIHGFHTL+DLD+  M++EA +RWLRPNEIHA+LCN K+F+IN KPVNLPKSGT+VLFDRKMLRNFRKDGHNWKK+KDGKT+KEAHEHLKVGNEERIHVYYAHGED+PTFVRRCYWLLDK+ E+IVLVHYRETHE    PATP NS+SSSI+D  +P +++E+ +SG  +  + G    +  + SL  +NHE+RLHE+NTL+WD+L+V
Sbjct:    9 LIGSEIHGFHTLQDLDIQTMLDEAYSRWLRPNEIHALLCNHKFFTINVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGNEERIHVYYAHGEDTPTFVRRCYWLLDKSQEHIVLVHYRETHEVHAAPATPGNSYSSSITDHLSPKIVAEDTSSGVHNTCNTG---FEVRSNSLGSRNHEIRLHEINTLDWDELLV 217          
BLAST of FC932289 vs. ExPASy Swiss-Prot
Match: CMTA6_ARATH (Calmodulin-binding transcription activator 6 OS=Arabidopsis thaliana GN=CMTA6 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.651e-65
Identity = 126/212 (59.43%), Postives = 150/212 (70.75%), Query Frame = 3
Query:   54 LVGSEIHGFHTLKDLDVANMMEEAKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKRKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHYRETHEGTPATPPNSHSS--SISDQSAPLLLSEEFNSGAGHAYSAGGKELQAPNESLTVQNHEMRLHELNTLEWDDLVV 683
            L+GSEIHGFHTL+DLDV  M+EEAK+RWLRPNEIHAILC                 G ++LFDRKMLRNFRKDGHNWKK+KDG+TVKEAHEHLKVGNEERIHVYYAHGED+ TFVRRCYWLLDK  ENIVLVHYR+T E    T  +S SS  S+S+Q+ P                     + A +    V+NH++ LH++NTL+WD+L+V
Sbjct:    9 LIGSEIHGFHTLQDLDVQTMLEEAKSRWLRPNEIHAILC-----------------GRIILFDRKMLRNFRKDGHNWKKKKDGRTVKEAHEHLKVGNEERIHVYYAHGEDNTTFVRRCYWLLDKARENIVLVHYRDTQEAA-TTSGDSISSPISVSEQTFP-------------------NRVAAEDIDTVVRNHDISLHDINTLDWDELLV 183          
BLAST of FC932289 vs. ExPASy Swiss-Prot
Match: CMTA2_ARATH (Calmodulin-binding transcription activator 2 OS=Arabidopsis thaliana GN=CMTA2 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.035e-40
Identity = 79/142 (55.63%), Postives = 103/142 (72.54%), Query Frame = 3
Query:   96 LDVANMMEEAKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKRKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHYRETHEGTPAT--PPNSHSSSIS 515
            LD+  ++ EA+ RWLRP EI  IL N + F I ++P N P SG++ LFDRK+LR FRKDGHNW+K+KDGKTVKEAHE LKVG+ + +H YYAHGED+  F RRCYW+L++ L +IV VHY E      +T     +HS+S+S
Sbjct:   13 LDIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVKGNRMSTSGTKENHSNSLS 154          
BLAST of FC932289 vs. ExPASy Swiss-Prot
Match: CMTA3_ARATH (Calmodulin-binding transcription activator 3 OS=Arabidopsis thaliana GN=CMTA3 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.495e-39
Identity = 76/144 (52.78%), Postives = 98/144 (68.06%), Query Frame = 3
Query:   63 SEIHGFHTLKDLDVANMMEEAKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKRKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHYRETHEGTPATPPN 494
            +E   F  + +LDV  ++ EA+ RWLRP EI  IL N + F I+ +P   P SG+V +FDRK+LR FRKDGHNW+K+KDGKTVKEAHE LK G+ + +H YYAHG+D+  F RR YWLL + L +IV VHY E      +T  N
Sbjct:    2 AEARRFSPVHELDVGQILSEARHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGQDNENFQRRSYWLLQEELSHIVFVHYLEVKGSRVSTSFN 145          
BLAST of FC932289 vs. ExPASy Swiss-Prot
Match: CMTA1_ARATH (Calmodulin-binding transcription activator 1 OS=Arabidopsis thaliana GN=CMTA1 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.734e-35
Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 3
Query:   96 LDVANMMEEAKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKRKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHY 455
            LD+  ++ EA+ RWLRP EI  IL N   F I ++    P SG++ LFDRK+LR FRKDGHNW+K+KDGKT++EAHE LKVG+ + +H YYAHGE +  F RRCYW+L++ L +IV VHY
Sbjct:   16 LDMEQLLSEAQHRWLRPTEICEILQNYHKFHIASESPTRPASGSLFLFDRKVLRYFRKDGHNWRKKKDGKTIREAHEKLKVGSIDVLHCYYAHGEANENFQRRCYWMLEQHLMHIVFVHY 135          
BLAST of FC932289 vs. ExPASy Swiss-Prot
Match: CMTA4_ARATH (Calmodulin-binding transcription activator 4 OS=Arabidopsis thaliana GN=CMTA4 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.734e-32
Identity = 60/129 (46.51%), Postives = 91/129 (70.54%), Query Frame = 3
Query:   84 TLKDLDVANMMEEAKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKRKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHYRETHE 470
            +L   +++ + +EA +RWL+P E+  IL N +  ++       P SG+++LF++++L+ FRKDGH W++++DG+ + EAHE LKVGN E ++ YYAHGE  PTF RR YW+LD   E+IVLVHYR+  E
Sbjct:   32 SLFQYEISTLYQEAHSRWLKPPEVLFILQNHESLTLTNTAPQRPTSGSLLLFNKRVLKFFRKDGHQWRRKRDGRAIAEAHERLKVGNAEALNCYYAHGEQDPTFRRRIYWMLDPEYEHIVLVHYRDVSE 160          
BLAST of FC932289 vs. ExPASy Swiss-Prot
Match: CMTA1_MOUSE (Calmodulin-binding transcription activator 1 OS=Mus musculus GN=Camta1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18
Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 3
Query:   87 LKDLDVANMMEEAKTRWLRPNEIHAILCNSKYFS--INAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKRKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHY 455
            L+ L   + + + + RW    EI A L   +     +   P   P++G+++L++RK ++ +RKDG+ WKKRKDGKT +E H  LKV   E ++  Y H    PTF RRCYWLL     +IVLVHY
Sbjct:   58 LECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVK-YRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQN--PDIVLVHY 179          
BLAST of FC932289 vs. ExPASy Swiss-Prot
Match: CMTA1_HUMAN (Calmodulin-binding transcription activator 1 OS=Homo sapiens GN=CAMTA1 PE=1 SV=4)

HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18
Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 3
Query:   87 LKDLDVANMMEEAKTRWLRPNEIHAILCNSKYFS--INAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKRKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHY 455
            L+ L   + + + + RW    EI A L   +     +   P   P++G+++L++RK ++ +RKDG+ WKKRKDGKT +E H  LKV   E ++  Y H    PTF RRCYWLL     +IVLVHY
Sbjct:   58 LECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVK-YRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQN--PDIVLVHY 179          
BLAST of FC932289 vs. ExPASy Swiss-Prot
Match: CMTA2_HUMAN (Calmodulin-binding transcription activator 2 OS=Homo sapiens GN=CAMTA2 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 5.417e-18
Identity = 48/117 (41.03%), Postives = 70/117 (59.83%), Query Frame = 3
Query:  111 MMEEAKTRWLRPNEIHAILCNSKYFS--INAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKRKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHY 455
            ++   + RW    EI + L   +     ++  P   P++G+++L++RK ++ +RKDG+ WKKRKDGKT +E H  LKV   E ++  Y H    PTF RRCYWLL     +IVLVHY
Sbjct:   33 LLPPERLRWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVK-YRKDGYLWKKRKDGKTTREDHMKLKVQGMECLYGCYVHSSIVPTFHRRCYWLLQN--PDIVLVHY 146          
BLAST of FC932289 vs. ExPASy Swiss-Prot
Match: CMTA2_MOUSE (Calmodulin-binding transcription activator 2 OS=Mus musculus GN=Camta2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16
Identity = 48/122 (39.34%), Postives = 70/122 (57.38%), Query Frame = 3
Query:  111 MMEEAKTRWLRPNEIHAILCNSKYFS--INAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKRKDGKTVKEAHEHLKVGNEERI-----HVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHY 455
            ++   + RW    EI + L   +     ++  P   P++G+++L++RK ++ +RKDG+ WKKRKDGKT +E H  LKV   E +     +  Y H    PTF RRCYWLL     +IVLVHY
Sbjct:   33 LLPPERLRWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVK-YRKDGYLWKKRKDGKTTREDHMKLKVQGMEPVSWQCLYGCYVHSSIVPTFHRRCYWLLQN--PDIVLVHY 151          
The following BLAST results are available for this feature:
BLAST of FC932289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
CMTA5_ARATH1.706e-8870.75Calmodulin-binding transcription activator 5 OS=Ar... [more]
CMTA6_ARATH2.651e-6559.43Calmodulin-binding transcription activator 6 OS=Ar... [more]
CMTA2_ARATH5.035e-4055.63Calmodulin-binding transcription activator 2 OS=Ar... [more]
CMTA3_ARATH9.495e-3952.78Calmodulin-binding transcription activator 3 OS=Ar... [more]
CMTA1_ARATH3.734e-3556.67Calmodulin-binding transcription activator 1 OS=Ar... [more]
CMTA4_ARATH1.734e-3246.51Calmodulin-binding transcription activator 4 OS=Ar... [more]
CMTA1_MOUSE2.431e-1840.80Calmodulin-binding transcription activator 1 OS=Mu... [more]
CMTA1_HUMAN2.431e-1840.80Calmodulin-binding transcription activator 1 OS=Ho... [more]
CMTA2_HUMAN5.417e-1841.03Calmodulin-binding transcription activator 2 OS=Ho... [more]
CMTA2_MOUSE2.276e-1639.34Calmodulin-binding transcription activator 2 OS=Mu... [more]
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Properties
Property NameValue
Genbank descriptionC34207A05EF PostHarveN Citrus clementina cDNA clone C34207A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932289 ID=FC932289; Name=FC932289; organism=Citrus clementina; type=EST; length=700bp
ACTCTCTCTGTGATCACCGAAAACAAGCAGGTTTTTATGCGATGGCTGAG
CTGCTTGTCGGCTCAGAGATTCATGGATTCCATACGTTGAAAGATTTGGA
TGTTGCTAATATGATGGAGGAGGCCAAGACAAGATGGCTTCGTCCGAATG
AAATTCATGCCATCCTATGTAATAGCAAGTATTTCAGCATCAATGCAAAG
CCAGTGAACTTGCCCAAAAGTGGCACTGTTGTATTGTTTGACCGCAAGAT
GCTTAGGAATTTTCGCAAAGATGGTCATAACTGGAAGAAGAGAAAGGACG
GGAAGACAGTTAAGGAAGCTCATGAGCATCTAAAAGTTGGCAATGAAGAG
AGGATTCATGTATACTACGCACATGGTGAAGATAGCCCAACCTTTGTTCG
TAGATGTTATTGGCTACTTGATAAGACTCTAGAAAACATAGTCCTCGTTC
ATTATCGTGAAACACATGAGGGAACTCCAGCCACCCCTCCGAATTCACAT
TCAAGTTCAATCTCAGACCAGTCTGCTCCTTTGCTTTTATCAGAAGAATT
TAATTCTGGAGCTGGTCATGCATACTCTGCTGGGGGAAAAGAACTACAAG
CACCAAATGAAAGTCTAACAGTCCAAAATCATGAAATGAGGCTTCACGAA
CTTAATACACTTGAATGGGATGACCTTGTGGTTCNAATGATTCTATGATT
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