FC932291
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: AB17I_ARATH (ABC transporter I family member 17 OS=Arabidopsis thaliana GN=ABCI17 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 2.573e-47 Identity = 95/153 (62.09%), Postives = 119/153 (77.78%), Query Frame = 1 Query: 31 MPSTCSLFRD-EVREHLLTVPGEAEAEDDNQIQKPKFRVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYKLLSL 486 MPS S D +REHL+ V +PK RV +L + +DDG+ ILKGV ++IPKG+I+G+IGPSGSGKST LR+LNRLWEPP TVFLDG DIT++DV++LRR+VGMLFQ+P LF+GTVADN+RYGP LRG+KL++ EVYKLLSL Sbjct: 1 MPSLWSNESDGSLREHLVDVVVSGS--------EPKIRVHDLTRVADDGSRILKGVTIDIPKGMIVGVIGPSGSGKSTFLRSLNRLWEPPESTVFLDGEDITNVDVIALRRRVGMLFQLPVLFQGTVADNVRYGPNLRGEKLSDEEVYKLLSL 145
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB1_THETN (Phosphate import ATP-binding protein pstB 1 OS=Thermoanaerobacter tengcongensis GN=pstB1 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 9.845e-23 Identity = 50/94 (53.19%), Postives = 68/94 (72.34%), Query Frame = 1 Query: 169 DGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKK 450 DG ILK V + K I ++GPSG+GKST+L+ +NRL EP G +F++G + ++DV+ LRRK+GM+FQ P LFEGTV +NI GP LRG+K Sbjct: 13 DGKYILKNVYFKFEKNGIYTVVGPSGAGKSTMLKLINRLIEPTEGAIFINGVEYKNIDVILLRRKIGMVFQRPFLFEGTVKENIELGPSLRGEK 106
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PHNC2_SYNJB (Phosphonates import ATP-binding protein phnC 2 OS=Synechococcus sp. GN=phnC2 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.625e-19 Identity = 51/101 (50.50%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 139 RVGELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSL---RRKVGMLFQIPALFEG-TVADNIRYG 429 R+ L K G LKGV +E+P G +M +IGPSG+GKSTLLR +NRL EP SG+++L+G D+T L+ L RRK+GM+FQ AL E TV +N+ G Sbjct: 3 RIDSLSKRYPTGDMALKGVTLEVPDGQVMALIGPSGAGKSTLLRCINRLVEPTSGSIWLNGIDLTRLNTRELRQARRKIGMIFQEYALVERLTVMENVLSG 103
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB2_THETN (Phosphate import ATP-binding protein pstB 2 OS=Thermoanaerobacter tengcongensis GN=pstB2 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 5.590e-18 Identity = 49/103 (47.57%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 184 LKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDI-TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG--KKLTENEV 468 LK +N+++ ++ +IGPSG GKST +R LNR+ + SGTV LDG+DI ++DV+ LR+KVGM+FQ P F TV DN+ YGP++ G K T NE+ Sbjct: 19 LKKINLDVEPNSVLALIGPSGCGKSTFIRTLNRMNDLIEGVKISGTVLLDGKDIYKEVDVIELRKKVGMVFQKPNPFPMTVYDNVAYGPRIHGIRDKRTLNEI 121
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: PSTB_METTH (Phosphate import ATP-binding protein pstB OS=Methanobacterium thermoautotrophicum GN=pstB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 9.536e-18 Identity = 47/99 (47.47%), Postives = 67/99 (67.68%), Query Frame = 1 Query: 169 DGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPS-----GTVFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG 444 D A ILK +N++IPK + +IGPSG GKST +R LNR+ + S G V+LDG+DI D+DV+ LR+KVGM+FQ P F ++ +N+ YG ++ G Sbjct: 17 DEAHILKDINLKIPKNTVTALIGPSGCGKSTFIRTLNRMNDVISGFRHEGHVYLDGKDIYDPDMDVVELRKKVGMVFQKPNPFPKSIFENVAYGLRVHG 115
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: MDR1_CRIGR (Multidrug resistance protein 1 OS=Cricetulus griseus GN=ABCB1 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 9.536e-18 Identity = 39/88 (44.32%), Postives = 64/88 (72.73%), Query Frame = 1 Query: 178 PILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLR 441 P+L+G+N+E+ KG + ++G SG GKST+++ L R ++P +GTVFLDG+++ L+V LR +G++ Q P LF+ ++A+NI YG R Sbjct: 1048 PVLQGLNLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGTVFLDGKEVNQLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSR 1135 HSP 2 Score: 83.1889 bits (204), Expect = 6.834e-16 Identity = 41/98 (41.84%), Postives = 65/98 (66.33%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYK 474 ILKG+N+++ G + ++G SG GKST ++ L RL++P G V +DG+DI ++V LR +G++ Q P LF T+A+NIRYG + +T +E+ K Sbjct: 406 ILKGLNLKVQSGQTVALVGNSGCGKSTTVQLLQRLYDPTEGVVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGRE----NVTMDEIEK 499
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: AB29B_ARATH (ABC transporter B family member 29 OS=Arabidopsis thaliana GN=ABCB29 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.124e-17 Identity = 41/90 (45.56%), Postives = 62/90 (68.89%), Query Frame = 1 Query: 157 KESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRY 426 K ++ P+L G+N+ I G + ++GPSG GK+TL++ L RL+EP SG++ +D DI D+ + SLR+ VG++ Q LF GT+ADNI Y Sbjct: 404 KYDENMLPVLDGLNLHIKAGETVALVGPSGGGKTTLIKLLLRLYEPSSGSIIIDKIDIKDIKLESLRKHVGLVSQDTTLFSGTIADNIGY 493
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: MDR2_CRIGR (Multidrug resistance protein 2 OS=Cricetulus griseus GN=PGY2 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 3.624e-17 Identity = 39/88 (44.32%), Postives = 64/88 (72.73%), Query Frame = 1 Query: 178 PILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLR 441 P+L+G+++E+ KG + ++G SG GKST+++ L R ++P +GTVFLDG++I L+V LR +G++ Q P LF+ ++A+NI YG R Sbjct: 1049 PVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGTVFLDGKEIKQLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSR 1136 HSP 2 Score: 85.8853 bits (211), Expect = 1.054e-16 Identity = 43/104 (41.35%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 163 SDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYK 474 S G ILKG+N+++ G + ++G SG GKST ++ L RL++P G V +DG+DI ++V LR +G++ Q P LF T+A+NIRYG + +T +E+ K Sbjct: 402 SRSGIKILKGLNLKVQSGQTVALVGKSGCGKSTTVQLLQRLYDPTEGVVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGRE----NVTMDEIEK 501
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: ABCBA_HUMAN (ATP-binding cassette sub-family B member 10, mitochondrial OS=Homo sapiens GN=ABCB10 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 4.732e-17 Identity = 41/84 (48.81%), Postives = 58/84 (69.05%), Query Frame = 1 Query: 178 PILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 PI + ++ IP G + ++GPSGSGKST+L L RL++P SGT+ LDG DI L+ + LR K+G + Q P LF ++A+NI YG Sbjct: 508 PIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYG 591
BLAST of FC932291 vs. ExPASy Swiss-Prot
Match: MDR3_MOUSE (Multidrug resistance protein 3 OS=Mus musculus GN=Abcb1a PE=1 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 6.181e-17 Identity = 38/88 (43.18%), Postives = 65/88 (73.86%), Query Frame = 1 Query: 178 PILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLR 441 P+L+G+++E+ KG + ++G SG GKST+++ L R ++P +G+VFLDG++I L+V LR ++G++ Q P LF+ ++A+NI YG R Sbjct: 1047 PVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSR 1134 HSP 2 Score: 80.8777 bits (198), Expect = 3.392e-15 Identity = 37/83 (44.58%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 181 ILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYG 429 ILKG+N+++ G + ++G SG GKST ++ + RL++P G V +DG+DI ++V LR +G++ Q P LF T+A+NIRYG Sbjct: 405 ILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYG 487 The following BLAST results are available for this feature:
BLAST of FC932291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932291 ID=FC932291; Name=FC932291; organism=Citrus clementina; type=EST; length=487bpback to top |