FC932302
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: LYS12_SCHPO (Probable homoisocitrate dehydrogenase OS=Schizosaccharomyces pombe GN=lys12 PE=1 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 1.863e-68 Identity = 138/216 (63.89%), Postives = 168/216 (77.78%), Query Frame = 1 Query: 34 MAAARTLRIGLIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVSSPSTKVAGYSSPIVALRKKLDLYANVRPVKTTAGNTNGKPIDLVIVRENTEDLYVKEERTIEGPNGK-VAEAIKRISEHASFRISNIAGEIALRRQKIRSASPATSTRDQAMVTITHKSNVLSQTDGLFRETARRA 678 M+A R + +GLIP DGIG+EV+PA RR++E+LP+ LKF F+DLDAG+ TF++TG ALP++TV+ LK EC+ ALFGAV SP+ KVAGYSSPIVALRKK+ LYANVRPVK+ G GKP+DLVIVRENTE LYVKEER ++ GK VAEAI+RISE AS +I +A EIA RQKIR S S + +VTI HKSNV+S TDGLFRE+ R A Sbjct: 1 MSATRRIVLGLIPADGIGKEVVPAARRLMENLPAKHKLKFDFIDLDAGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTHKVAGYSSPIVALRKKMGLYANVRPVKSLDG-AKGKPVDLVIVRENTECLYVKEERMVQNTPGKRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRE-SGTYSIHKKPLVTIIHKSNVMSVTDGLFRESCRHA 214
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: LYS12_YEAST (Homoisocitrate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=LYS12 PE=1 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 9.566e-65 Identity = 133/214 (62.15%), Postives = 168/214 (78.50%), Query Frame = 1 Query: 37 AAARTLRIGLIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVSSPSTKVAGYSSPIVALRKKLDLYANVRPVKTTAGNTNGKPIDLVIVRENTEDLYVKEERT-IEGPNG-KVAEAIKRISEHASFRISNIAGEIALRRQKIRSASPATSTRDQAMVTITHKSNVLSQTDGLFRETAR 672 AA ++L IGLIPGDGIG+EVIPAG+++LE+L S L F+F+DL AG++TFQ+TG ALPD+TV LK++C GALFGAV SP+TKV GYSSPIVALR+++ L+ANVRPVK+ G GKPID+VIVRENTEDLY+K E+T I+ G +VA+A KRISE A+ RI+ IA +IAL+R TR QA +T+THKSNVLSQ+DGLFRE + Sbjct: 19 AARKSLTIGLIPGDGIGKEVIPAGKQVLENLNSKHGLSFNFIDLYAGFQTFQETGKALPDETVKVLKEQCQGALFGAVQSPTTKVEGYSSPIVALRREMGLFANVRPVKSVEGE-KGKPIDMVIVRENTEDLYIKIEKTYIDKATGTRVADATKRISEIATRRIATIALDIALKR---------LQTRGQATLTVTHKSNVLSQSDGLFREICK 222
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: LEU3_METJA (3-isopropylmalate/3-methylmalate dehydrogenase OS=Methanocaldococcus jannaschii GN=leuB PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 9.352e-28 Identity = 85/204 (41.67%), Postives = 115/204 (56.37%), Query Frame = 1 Query: 55 RIGLIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVSSPSTKVAGYSSPIVALRKKLDLYANVRPVKTTAGNTNGKP-IDLVIVRENTEDLYVKEERTIEGPNGKVAEAIKRISEHASFRISNIAGEIALRRQKIRSASPATSTRDQAMVTITHKSNVLSQTDGLFRE 663 +I +I GDGIG+EV+PA ++LE+ L F FV +AG E +++TG ALP++T++T +CD LFGA + V IV LR LD YAN+RPVK G +P ID VIVRENTE LY E I+ + A + I+E A RI A +A R+K+ + VT HK+NVL TDGLF++ Sbjct: 3 KICVIEGDGIGKEVVPATIQVLEAT----GLPFEFVYAEAGDEVYKRTGKALPEETIET-ALDCDAVLFGAAGETAADV------IVKLRHILDTYANIRPVKAYKGVKCLRPDIDYVIVRENTEGLYKGIEAEID---EGITIATRVITEKACERIFRFAFNLARERKKMGK---------EGKVTCAHKANVLKLTDGLFKK 183
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: LEU3_METTH (3-isopropylmalate dehydrogenase OS=Methanobacterium thermoautotrophicum GN=leuB PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.221e-27 Identity = 85/207 (41.06%), Postives = 118/207 (57.00%), Query Frame = 1 Query: 46 RTLRIGLIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVSSPSTKVAGYSSPIVALRKKLDLYANVRPVKTTAGNTNGKP-IDLVIVRENTEDLYVKEERTIEGPNGKVAEAIKRISEHASFRISNIAGEIALRRQKIRSASPATSTRDQAMVTITHKSNVLSQTDGLFRE 663 ++++I +IPGDGIG EV+ A IL ++L+L F+ DAG ++TGTALP++T++ + E LFGA + V IV LR++ DL+AN+RPVK+ G P +D VIVRENTEDLYV +E P G VA+ I I+ AS RIS A + A + VT HK+NVL +TDG+FR+ Sbjct: 2 KSMKIAVIPGDGIGVEVMEAALHIL----NTLDLDLEFIHADAGDACLKRTGTALPEETLEAV-GEARATLFGAAGESAADV------IVRLRREFDLFANLRPVKSLPGVPCLYPDLDFVIVRENTEDLYVGDEEYT--PEGAVAKRI--ITRTASRRISQFAFQYAQK-------------EGMQKVTAVHKANVLKKTDGIFRD 180
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: AKSF_METJA (Homoisocitrate dehydrogenase OS=Methanocaldococcus jannaschii GN=aksF PE=1 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 1.595e-27 Identity = 85/216 (39.35%), Postives = 113/216 (52.31%), Query Frame = 1 Query: 52 LRIGLIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVSSPST-KVAGYSSPIVALRKKLDLYANVRPVKTTAGNT-----------NGKPIDLVIVRENTEDLYVKEERTIEGPNGKVAEAIKRISEHASFRISNIAGEIALRRQKIRSASPATSTRDQAMVTITHKSNVLSQTDGLFRE 663 +++ +I GDGIG+EVIP +IL L +F + +AG E +K G ALP+ T++ K E D LFGA++SP +V Y SPI+ LRK LYANVRP+ N K ID+VI+RENTEDLYV ER A A + I+ S RI A E A++ + + V+ HK+NVL TDGLF E Sbjct: 2 MKVCVIEGDGIGKEVIPEAIKILNELG-----EFEIIKGEAGLECLKKYGNALPEDTIEKAK-EADIILFGAITSPKPGEVKNYKSPIITLRKMFHLYANVRPINNFGIGQLIGKIADYEFLNAKNIDIVIIRENTEDLYVGRERL----ENDTAIAERVITRKGSERIIRFAFEYAIKNNRKK-------------VSCIHKANVLRITDGLFLE 194
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: LEU3_ARCFU (3-isopropylmalate dehydrogenase OS=Archaeoglobus fulgidus GN=leuB PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.350e-26 Identity = 85/207 (41.06%), Postives = 114/207 (55.07%), Query Frame = 1 Query: 55 RIGLIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVSSPSTKVAGYSSPIVALRKKLDLYANVRPVKTTAGNTNGKP-IDLVIVRENTEDLYVKEERTIEGPNGKVAEAIKRISEHASFRISNIAGEIALRRQKIRSASPATSTRDQAMVTITHKSNVLSQTDGLFRETAR 672 +I +IPGDGIG+EV+ A ILE L +L F + DAG E +K G ALPD+T++ +K D LFGA + V IV LR++L +ANVRP K G P +D+V+VRENTE LY+ E G V EAI+ I+ AS RI+ A E+A R + + VT HK+NV+ +T GLFR+ R Sbjct: 3 KIVVIPGDGIGKEVMEAAMLILEKL----DLPFEYSYYDAGDEALEKYGKALPDETLEACRKS-DAVLFGAAGETAADV------IVRLRRELGTFANVRPAKAIEGIECLYPGLDIVVVRENTECLYM----GFEFGFGDVTEAIRVITREASERIARYAFELAKREGRKK-------------VTALHKANVMKKTCGLFRDVCR 181
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: LEU3_SULSO (3-isopropylmalate dehydrogenase OS=Sulfolobus solfataricus GN=leuB PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.143e-25 Identity = 81/209 (38.76%), Postives = 108/209 (51.67%), Query Frame = 1 Query: 49 TLRIGLIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVSSPSTKVAGYSSPIVALRKKLDLYANVRPVKTTAGNTNGKP-IDLVIVRENTEDLYVKEERTIEGPNGKVAEAIKRISEHASFRISNIAGEIALRRQKIRSASPATSTRDQAMVTITHKSNVLSQTDGLFRETAR 672 T R+ +IPGDGIG E+ +RI+ L NL ++++AG K G ALP T+D ++K D L G V + V +V LR+ D+YAN+RP K+ + P +DLVIVRENTEDLY E + V AIK +E AS RI N+A AL R++ VT HK+NV+ TDGLF R Sbjct: 2 TFRVAVIPGDGIGPELYEGSKRIIAKLIEKYNLDIDLIEVEAGDVALNKYGEALPRHTLDVIEK-ADMILKGPVGETAMDV------VVKLRQMYDMYANIRPAKSLPNVQSKYPNVDLVIVRENTEDLYKGFEFV---TSTGVTIAIKVTTEFASKRIVNVALNYALMRRR--------------KVTCVHKANVMRVTDGLFASVCR 186
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: LEU3_SULTO (3-isopropylmalate dehydrogenase OS=Sulfolobus tokodaii GN=leuB PE=1 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 1.397e-23 Identity = 74/206 (35.92%), Postives = 108/206 (52.43%), Query Frame = 1 Query: 58 IGLIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVSSPSTKVAGYSSPIVALRKKLDLYANVRPVKTTAG-NTNGKPIDLVIVRENTEDLYVKEERTIEGPNGKVAEAIKRISEHASFRISNIAGEIALRRQKIRSASPATSTRDQAMVTITHKSNVLSQTDGLFRETAR 672 + LI GDGIG E++ +RIL + +L +++++AG + G ALP ++ + K D L G V + V +V LR+ D+YAN+RP K+ G +T +D++IVRENTEDLY E + + VA +K I+ AS RI+ + ALRR+K VT HK+NV+ TDGLF E R Sbjct: 5 VALIQGDGIGPEIVSKSKRILAKINELYSLPIEYIEVEAGDRALARYGEALPKDSLKIIDK-ADIILKGPVGESAADV------VVKLRQIYDMYANIRPAKSIPGIDTKYGNVDILIVRENTEDLYKGFEHIV---SDGVAVGMKIITRFASERIAKVGLNFALRRRK--------------KVTCVHKANVMRITDGLFAEACR 186
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: IDH_ARCFU (Isocitrate dehydrogenase [NADP] OS=Archaeoglobus fulgidus GN=icd PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19 Identity = 73/212 (34.43%), Postives = 111/212 (52.36%), Query Frame = 1 Query: 73 GDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVSSPSTKVAGYSSPIVALRKKLDLYANVRPVKTTAG----NTNGKPIDLVIVRENTEDLYVKEERTIEGPNGKVAEAIK-----------RISEHASFRISNIAGEIALRRQKIRSASPATSTRDQAMVTITHKSNVLSQTDGLFRE 663 GDGIG++V+PA R+L++ + + + + AG + ++ G LPD T++ + KE AL G +++P GY S V +R+ LDLYANVRPV G + + ++ VI RENTED+Y IE P G EA+K I E + I I+ E A +R +R A ++ VT+ HK N++ T+G FR+ Sbjct: 35 GDGIGKDVVPAAIRVLDAAADKIGKEVVWFQVYAGEDAYKLYGNYLPDDTLNAI-KEFRVALKGPLTTPVG--GGYRSLNVTIRQVLDLYANVRPVYYLKGVPSPIKHPEKVNFVIFRENTEDVYA----GIEWPRGS-EEALKLIRFLKNEFGVTIREDSGIGIKPIS-EFATKR-LVRMAIRYAIENNRKSVTLVHKGNIMKYTEGAFRD 236
BLAST of FC932302 vs. ExPASy Swiss-Prot
Match: IDH1_SCHPO (Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial OS=Schizosaccharomyces pombe GN=idh1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.773e-18 Identity = 75/227 (33.04%), Postives = 123/227 (54.19%), Query Frame = 1 Query: 13 LFKRSIKMAAA-RTLRIG------LIPGDGIGREVIPAGRRILESLPSSLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGALFGAVSSPSTKVAGYSSPIVALRKKLDLYANVRPVKTTAG-NTNGKPIDLVIVRENTEDLYVK-EERTIEGPNGKVAEAIKRISEHASFRISNIAGEIALRRQKIRSASPATSTRDQAMVTITHKSNVLSQTDGLFRET 666 +FK ++ ++A + L+ G LIPGDGIGRE A I ++ +++ ++F +D+ + + +G AL + + +LK+ G L G + +P K G++S VALRK+LD+YA++ +K G T +D I+RENTE Y E +++ G V E++K I+E+ S RI+ A + AL+ + VT HK+N++ DGLFR T Sbjct: 1 MFKSLVRKSSAFQPLKYGGKYTVTLIPGDGIGRETSNAVTEIFKT--ANVPIEFEEIDVTGMEKNNKSSGDALHE-AIQSLKRNKVG-LKGILFTPFEK-GGHTSFNVALRKELDIYASLVLIKNIPGFKTRHDNVDFAIIRENTEGEYSGLEHQSVPG----VVESLKIITEYKSKRIAQFAFDFALQNGR-------------KSVTCIHKANIMKLADGLFRRT 205 The following BLAST results are available for this feature:
BLAST of FC932302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932302 ID=FC932302; Name=FC932302; organism=Citrus clementina; type=EST; length=680bpback to top |