FC932304

Overview
NameFC932304
Unique NameFC932304
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length548
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10281 contig Ccv1_Contig10281:177..724. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932304 vs. ExPASy Swiss-Prot
Match: GSTZ_EUPES (Glutathione S-transferase zeta class OS=Euphorbia esula PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 2.195e-62
Identity = 117/169 (69.23%), Postives = 138/169 (81.66%), Query Frame = 3
Query:    3 EFLKINPIGYVPALXXXXXXXXXXXXILMYLEEKYPQPPLLPSDLKGKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPS 509
            EFLKINPIGYVPAL            ILMYLEEKYP+ P+LP+D+  KAINYQAANIVSSSIQPLQNLAV+ +I EK   DE+  W + HI KGFAALEKLL+ +AG++ATGDEV+LADL L PQ++AA+ RFN+DMTQFPLLLRLHEAYS+LP FQNA+P+KQPD+ S
Sbjct:   53 EFLKINPIGYVPALVDGEDVISDSFAILMYLEEKYPEHPILPADIHKKAINYQAANIVSSSIQPLQNLAVLNFIGEKVSPDEKVPWVQRHISKGFAALEKLLQGHAGRFATGDEVYLADLFLEPQIHAAITRFNVDMTQFPLLLRLHEAYSQLPEFQNAMPDKQPDSTS 221          
BLAST of FC932304 vs. ExPASy Swiss-Prot
Match: GSTZ1_ARATH (Glutathione S-transferase zeta-class 1 OS=Arabidopsis thaliana GN=GST18 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.426e-53
Identity = 100/170 (58.82%), Postives = 128/170 (75.29%), Query Frame = 3
Query:    3 EFLKINPIGYVPALXXXXXXXXXXXXILMYLEEKYPQPPLLPSDLKGKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPSS 512
            +F KINP+G VPAL            I+MYL+EKYP+PPLLP DL  +A+NYQA +IV S IQP QNLAV++YIEEK   +E+  W    I KGF ALEKLL + AGK+ATGDE++LADL LAPQ++ A+NRF ++M  +P L + +E+Y++LPAFQNA+PEKQPDAPSS
Sbjct:   50 DFKKINPMGTVPALVDGDVVINDSFAIIMYLDEKYPEPPLLPRDLHKRAVNYQAMSIVLSGIQPHQNLAVIRYIEEKINVEEKTAWVNNAITKGFTALEKLLVNCAGKHATGDEIYLADLFLAPQIHGAINRFQINMEPYPTLAKCYESYNELPAFQNALPEKQPDAPSS 219          
BLAST of FC932304 vs. ExPASy Swiss-Prot
Match: GSTZ2_ARATH (Probable glutathione S-transferase zeta-class 2 OS=Arabidopsis thaliana GN=At2g02380 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 4.149e-53
Identity = 100/170 (58.82%), Postives = 127/170 (74.71%), Query Frame = 3
Query:    3 EFLKINPIGYVPALXXXXXXXXXXXXILMYLEEKYPQPPLLPSDLKGKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPSS 512
            +F KINP+G VPAL            I+MYL++KYP+PPLLPSD   +A+NYQA +IV S IQP QN+A+ +Y+E+K  A+E+  W    I KGF ALEKLL   AGKYATGDEV+LADL LAPQ++AA NRF+++M  FP L R +E+Y++LPAFQNAVPEKQPD PS+
Sbjct:   53 DFKKINPMGTVPALVDGDVVINDSFAIIMYLDDKYPEPPLLPSDYHKRAVNYQATSIVMSGIQPHQNMALFRYLEDKINAEEKTAWITNAITKGFTALEKLLVSCAGKYATGDEVYLADLFLAPQIHAAFNRFHINMEPFPTLARFYESYNELPAFQNAVPEKQPDTPST 222          
BLAST of FC932304 vs. ExPASy Swiss-Prot
Match: GSTZ1_DIACA (Glutathione S-transferase 1 OS=Dianthus caryophyllus GN=GST1 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.288e-50
Identity = 98/157 (62.42%), Postives = 121/157 (77.07%), Query Frame = 3
Query:    3 EFLKINPIGYVPALXXXXXXXXXXXXILMYLEEKYPQPPLLPSDLKGKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQ 473
            EFLK+NP+GYVP L            I+MYLEEK+P+ PLLP DL+ +A+NYQAANIV+S+IQPLQNLAV+ YIEEK G+DE+  WAK HI KGF+ALEKLLK +AGKYATGDEV LADL LAPQ+ A++  F +DM +FPLL  L++AY K   F+
Sbjct:   50 EFLKLNPLGYVPVLVHGDIVIADSLAIIMYLEEKFPENPLLPQDLQKRALNYQAANIVTSNIQPLQNLAVLNYIEEKLGSDEKLSWAKHHIKKGFSALEKLLKGHAGKYATGDEVGLADLFLAPQIIASITGFGMDMAEFPLLKSLNDAYLKYQHFR 206          
BLAST of FC932304 vs. ExPASy Swiss-Prot
Match: GSTZ_WHEAT (Glutathione S-transferase OS=Triticum aestivum GN=GSTZ1 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.429e-45
Identity = 89/170 (52.35%), Postives = 117/170 (68.82%), Query Frame = 3
Query:    3 EFLKINPIGYVPALXXXXXXXXXXXXILMYLEEKYPQPPLLPSDLKGKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPSS 512
            ++ KINPI Y+PAL            I++YLE+KYPQ PL+P D+K K ++ Q ANIV SSIQPLQ   V+   E +   DE     + +I KGF A+EKLL     KY  GDEV L D+CLAPQ++AA+NRF +DMT++P+L RLH+AY K+PAFQ A+P+ QPDAPS+
Sbjct:   43 DYEKINPIKYIPALVDGDFVLSDSLAIMLYLEDKYPQHPLVPKDIKTKGLDLQIANIVCSSIQPLQGYGVIGLHEGRLSPDESLEVVQRYIDKGFRAIEKLLDGCDSKYCVGDEVHLGDVCLAPQIHAAINRFQIDMTKYPILSRLHDAYMKIPAFQAALPQNQPDAPSA 212          
BLAST of FC932304 vs. ExPASy Swiss-Prot
Match: MAAI_DICDI (Maleylacetoacetate isomerase OS=Dictyostelium discoideum GN=mai PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.534e-31
Identity = 73/168 (43.45%), Postives = 102/168 (60.71%), Query Frame = 3
Query:    3 EFLKINPIGYVPALXXXXXXXXXXXXILMYLEEKYPQPPLLPSDLKGKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGAD-ERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDA 503
            E+ K+NP+  +P L            IL YLEE +P+ PL+P     +AI  Q   I+ S IQPLQNL V+  I + +G D ++  WA+T I  GF  LEKLL+ ++GK+  GD V  ADLCL  Q+Y A NRFN+DMT +P + R+++    +P F  A+P+ QPDA
Sbjct:   49 EYSKLNPMKAIPTLEIDGHIIGQSLAILEYLEETHPENPLMPKGSYERAIARQMMQIIGSDIQPLQNLKVLGLIAQYSGDDSKKSEWARTVITNGFNGLEKLLEKHSGKFCVGDSVSFADLCLPAQVYNA-NRFNVDMTPYPNITRVNQHLLTIPEFIEALPQNQPDA 215          
BLAST of FC932304 vs. ExPASy Swiss-Prot
Match: MAAI2_DROME (Probable maleylacetoacetate isomerase 2 OS=Drosophila melanogaster GN=CG9363 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 6.446e-30
Identity = 69/168 (41.07%), Postives = 99/168 (58.93%), Query Frame = 3
Query:    3 EFLKINPIGYVPALXXXXXXXXXXXXILMYLEEKYPQPPLLPSDLKGKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAP 506
            E+ ++NP+  VPAL            I+ YLEE  PQ PLLP D+  +A   +   I+ S IQPLQNL V+ ++    G +++  WA+  I +GF A+EK L   AGKY  GDE+ +AD CL PQ++ A  RF++D+  +P++LR+       PAF+ A P  QPD P
Sbjct:   59 EYREVNPMEQVPALQIDGHTLIESVAIMHYLEETRPQRPLLPQDVHKRAKVREIVEIICSGIQPLQNLIVLIHV----GEEKKKEWAQHWITRGFRAVEKALSTSAGKYCVGDEISMADCCLVPQVFNA-RRFHVDLRPYPIILRIDRELESNPAFRAAHPSNQPDCP 221          
BLAST of FC932304 vs. ExPASy Swiss-Prot
Match: MAAI_MOUSE (Maleylacetoacetate isomerase OS=Mus musculus GN=Gstz1 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.308e-29
Identity = 69/169 (40.83%), Postives = 101/169 (59.76%), Query Frame = 3
Query:    3 EFLKINPIGYVPALXXXXXXXXXXXXILMYLEEKYPQPPLLPSDLKGKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPS 509
            EF  +NP+  VPAL            I+ YLEE  P P LLP D + +AI    +++++S IQPLQNL+V+K +    G + +  WA+  I  GF ALEK+L+  AGKY  GDEV +AD+CL PQ+ A   RF +D++ +P +  +++    L  FQ + P +QPD P+
Sbjct:   49 EFQTLNPMKQVPALKIDGITIVQSLAIMEYLEETRPIPRLLPQDPQKRAIVRMISDLIASGIQPLQNLSVLKQV----GQENQMQWAQKVITSGFNALEKILQSTAGKYCVGDEVSMADVCLVPQV-ANAERFKVDLSPYPTISHINKELLALEVFQVSHPRRQPDTPA 212          
BLAST of FC932304 vs. ExPASy Swiss-Prot
Match: GSTZ2_DIACA (Glutathione S-transferase 2 (Fragment) OS=Dianthus caryophyllus GN=GST2 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 7.880e-28
Identity = 59/96 (61.46%), Postives = 73/96 (76.04%), Query Frame = 3
Query:    3 EFLKINPIGYVPALXXXXXXXXXXXXILMYLEEKYPQPPLLPSDLKGKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFA 290
            EFLK+NP+GYVPAL            I+MYLEEK+P+ PLLP DL+ +A+NYQAANIV+S+IQP QNLAV+ YIEEK G+DE+  WA  HI KGF+
Sbjct:   50 EFLKLNPLGYVPALVHGDIVIADSLAIIMYLEEKFPENPLLPRDLQKRALNYQAANIVASNIQPFQNLAVLNYIEEKLGSDEKLSWANHHIKKGFS 145          
BLAST of FC932304 vs. ExPASy Swiss-Prot
Match: MAAI1_DROME (Probable maleylacetoacetate isomerase 1 OS=Drosophila melanogaster GN=CG9362 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.994e-27
Identity = 65/168 (38.69%), Postives = 97/168 (57.74%), Query Frame = 3
Query:    3 EFLKINPIGYVPALXXXXXXXXXXXXILMYLEEKYPQPPLLPSDLKGKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAP 506
            E+ ++NP+  VP+L            I+ YLEE  PQP LLP D   +A   +   ++ S IQPLQN++V+ +I    G D+   WA+  I +GF  LEK+L   AGK+  GDE+ +AD+CL PQ+  A  R+  D+T +P ++RL++   +L  F+   P  QPD P
Sbjct:   78 EYREVNPMQKVPSLKIDGHTLCDSVAIIHYLEETRPQPALLPQDPVKRAKIREIVELICSGIQPLQNVSVLDHI----GKDQSLQWAQHWISRGFQGLEKVLSHSAGKFCVGDELSMADICLVPQVRNA-RRYKADLTPYPTIVRLNQELQELDVFKATHPSTQPDCP 240          
The following BLAST results are available for this feature:
BLAST of FC932304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
GSTZ_EUPES2.195e-6269.23Glutathione S-transferase zeta class OS=Euphorbia ... [more]
GSTZ1_ARATH1.426e-5358.82Glutathione S-transferase zeta-class 1 OS=Arabidop... [more]
GSTZ2_ARATH4.149e-5358.82Probable glutathione S-transferase zeta-class 2 OS... [more]
GSTZ1_DIACA3.288e-5062.42Glutathione S-transferase 1 OS=Dianthus caryophyll... [more]
GSTZ_WHEAT1.429e-4552.35Glutathione S-transferase OS=Triticum aestivum GN=... [more]
MAAI_DICDI1.534e-3143.45Maleylacetoacetate isomerase OS=Dictyostelium disc... [more]
MAAI2_DROME6.446e-3041.07Probable maleylacetoacetate isomerase 2 OS=Drosoph... [more]
MAAI_MOUSE9.308e-2940.83Maleylacetoacetate isomerase OS=Mus musculus GN=Gs... [more]
GSTZ2_DIACA7.880e-2861.46Glutathione S-transferase 2 (Fragment) OS=Dianthus... [more]
MAAI1_DROME2.994e-2738.69Probable maleylacetoacetate isomerase 1 OS=Drosoph... [more]

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Properties
Property NameValue
Genbank descriptionC34207B08EF PostHarveN Citrus clementina cDNA clone C34207B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932304 ID=FC932304; Name=FC932304; organism=Citrus clementina; type=EST; length=548bp
CTGAGTTTTTGAAGATCAACCCTATTGGCTACGTGCCGGCTTTGGTTGAT
GGAGATTTTGTTGTATCTGATTCTTTTGTCATTTTAATGTACCTGGAAGA
GAAGTATCCTCAGCCTCCATTGTTGCCTTCTGATCTTAAGGGAAAAGCTA
TCAATTATCAGGCTGCAAATATTGTTTCCTCGAGCATACAGCCTCTTCAG
AATCTTGCTGTAGTGAAGTACATTGAGGAAAAAGCTGGTGCAGATGAGAG
AGACATCTGGGCTAAAACTCACATTGGAAAAGGCTTTGCGGCACTTGAGA
AGCTGCTAAAAGACTATGCTGGGAAATATGCAACTGGAGATGAAGTTTTC
CTGGCAGATTTGTGTCTGGCACCACAGCTTTATGCGGCGGTCAACAGGTT
CAACCTTGACATGACCCAATTCCCTCTTTTGCTGAGGTTGCATGAGGCAT
ACAGCAAGCTACCGGCATTTCAAAATGCTGTACCAGAAAAACAACCGGAT
GCCCCTTCATCATGAAAGTATAGTTATAACNAATACTGAGGCAGTATG
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