FC932329

Overview
NameFC932329
Unique NameFC932329
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5569 contig Ccv1_Contig5569:114..807. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 2.068e-86
Identity = 151/182 (82.97%), Postives = 165/182 (90.66%), Query Frame = 1
Query:   25 MESADSSTGGSP-QPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSS--GSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNN 561
            MES DSS G  P QPNLPPGFRFHPTDEELV+HYLK+KA S PLPV+IIA+VDLYKFDPWELPAKA+FGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPV+S+  G ++KVGVKKALVFY GKPPKG+K++WIMHEYRLTDNK ++    CD GNKKNSLRLDDWVLCRIYKKNN
Sbjct:    1 MESTDSSGGPPPPQPNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHI---CDFGNKKNSLRLDDWVLCRIYKKNN 179          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 9.035e-66
Identity = 115/165 (69.70%), Postives = 132/165 (80.00%), Query Frame = 1
Query:   67 NLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNN 561
            NLPPGFRFHPTDEELVVHYL +K +  PLPV IIAEVDLYK DPW+LP KA FG +EWYFF+PRDRKYPNG+RPNRAA  GYWKATG DKPV   GS + VG+KKALVFY GK P+G+KT+WIMHEYRL D   +++ P    G KK S +LD+WVLCR+Y K N
Sbjct:   20 NLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLAD---ADRAP----GGKKGSQKLDEWVLCRLYNKKN 177          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.305e-64
Identity = 115/172 (66.86%), Postives = 133/172 (77.33%), Query Frame = 1
Query:   61 QPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNLHRPL 576
            Q  LPPGFRFHPTDEEL+V+YL+ +  S P PVSII EVD+YKFDPW+LP K  FGE EWYFFSPR+RKYPNG RPNRAA SGYWKATGTDK + S  SN  VGVKKALVFY G+PPKGIKT+WIMHEYRL D++ ++         +  S+RLD+WVLCRIYKK    + L
Sbjct:    6 QSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSN--VGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKAST-------KRNGSMRLDEWVLCRIYKKRGASKLL 168          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.796e-64
Identity = 119/175 (68.00%), Postives = 132/175 (75.43%), Query Frame = 1
Query:   52 GSPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIY-KKNNLHRP 573
            G     LPPGFRFHPTDEELV+HYL ++ +  P+ V IIAE+DLYKFDPW+LP  A +GE+EWYFFSPRDRKYPNG+RPNRAA SGYWKATG DKPV   GS + V +KKALVFY GK PKG KTNWIMHEYRL D   S          KKNSLRLDDWVLCRIY KK  L +P
Sbjct:    3 GGQDLQLPPGFRFHPTDEELVMHYLCRRCAGLPIAVPIIAEIDLYKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPV---GSPKPVAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRS--------ARKKNSLRLDDWVLCRIYNKKGGLEKP 166          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 1.221e-62
Identity = 114/162 (70.37%), Postives = 128/162 (79.01%), Query Frame = 1
Query:   70 LPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKK 555
            LPPGFRFHPTDEELV+HYL +K +S  + V IIAE+DLYK+DPWELP  A +GE+EWYFFSPRDRKYPNG+RPNR+A SGYWKATG DKP+   G  + VG+KKALVFY GK PKG KTNWIMHEYRL D   S       +  KKNSLRLDDWVLCRIY K
Sbjct:    7 LPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPI---GLPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRS-------VRKKKNSLRLDDWVLCRIYNK 158          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.130e-61
Identity = 114/173 (65.90%), Postives = 131/173 (75.72%), Query Frame = 1
Query:   49 GGSPQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLG-NKKNSLRLDDWVLCRIYKKNNL 564
            GG+ Q  LPPGFRFHPTD+ELV++YL +K    PL   +IAEVDLYKF+PW+LP +A  GE+EWYFFSPRDRKYPNG RPNRAA +GYWKATG DKPV   GS + V +KKALVFY GKPPKG+KTNWIMHEYRL D  V        L  +  N+LRLDDWVLCRIY K  +
Sbjct:    4 GGALQ--LPPGFRFHPTDDELVMYYLCRKCGGLPLAAPVIAEVDLYKFNPWDLPERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPV---GSPRAVAIKKALVFYAGKPPKGVKTNWIMHEYRLAD--VDRSAAARKLSKSSHNALRLDDWVLCRIYNKKGV 169          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 6.701e-61
Identity = 108/165 (65.45%), Postives = 125/165 (75.76%), Query Frame = 1
Query:   67 NLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNN 561
            NLPPGFRFHPTDEELV HYL  +A+    PV IIAE+DLY+ DPW+LP +A FG +EWYFF+PRDRKYPNG+RPNRAA SGYWKATG DKPV+ +G  +  G+KKALVFY GKPP+G+KT WIMHEYRL       K  G        +LRLDDWVLCR+Y K N
Sbjct:   16 NLPPGFRFHPTDEELVAHYLCPRAAGRAAPVPIIAELDLYRHDPWDLPHRALFGRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNG--RTAGIKKALVFYHGKPPRGVKTEWIMHEYRLA------KKGGAAAAAGAGALRLDDWVLCRLYNKKN 172          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.950e-60
Identity = 111/165 (67.27%), Postives = 127/165 (76.97%), Query Frame = 1
Query:   67 NLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL--TDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKK 555
            NLP GFRFHPTDEELV  YL ++ +S P+ V +IAE+DLYKF+PWELP  A +GE+EWYFFS RDRKYPNG+RPNRAA +GYWKATG DKP+   G  + +G+KKALVFY GK PKGIKTNWIMHEYRL   D   S         NKKN+LRLDDWVLCRIY K
Sbjct:   49 NLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPI---GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSAST--------NKKNNLRLDDWVLCRIYNK 202          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.191e-59
Identity = 108/167 (64.67%), Postives = 126/167 (75.45%), Query Frame = 1
Query:   61 QPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKKNN 561
            Q +LPPGFRF+PTDEEL+V YL +KA+     + +IAE+DLYKFDPW LP KA FGE+EWYFFSPRDRKYPNG+RPNR A SGYWKATGTDK + + G  Q+VG+KKALVFY GK PKG KTNWIMHEYRL +              +  S +LDDWVLCRIYKK +
Sbjct:   11 QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG--QRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEP-----------SRRNGSTKLDDWVLCRIYKKQS 164          
BLAST of FC932329 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.070e-58
Identity = 107/165 (64.85%), Postives = 126/165 (76.36%), Query Frame = 1
Query:   61 QPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVMSSGSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLTDNKVSNKPPGCDLGNKKNSLRLDDWVLCRIYKK 555
            Q +LPPGFRF+PTDEEL+V YL +KA+     + +IAE+DLYKFDPW LP+KA FGE+EWYFFSPRDRKYPNG+RPNR A SGYWKATGTDK + + G  ++VG+KKALVFY GK PKG KTNWIMHEYRL +              +  S +LDDWVLCRIYKK
Sbjct:   11 QLSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEG--RRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEP-----------SRRNGSTKLDDWVLCRIYKK 162          
The following BLAST results are available for this feature:
BLAST of FC932329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
NAC18_ARATH2.068e-8682.97NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC68_ORYSJ9.035e-6669.70NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC29_ARATH1.305e-6466.86NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC48_ORYSJ3.796e-6468.00NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC2_ARATH1.221e-6270.37NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC71_ORYSJ5.130e-6165.90NAC domain-containing protein 71 OS=Oryza sativa s... [more]
NAC67_ORYSJ6.701e-6165.45NAC domain-containing protein 67 OS=Oryza sativa s... [more]
NA102_ARATH1.950e-6067.27NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC19_ARATH8.191e-5964.67NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC55_ARATH1.070e-5864.85NAC domain-containing protein 55 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC34207D10EF PostHarveN Citrus clementina cDNA clone C34207D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932329 ID=FC932329; Name=FC932329; organism=Citrus clementina; type=EST; length=694bp
GGCAGCTAGCTAGCATTAATATATATGGAGAGTGCAGACTCATCGACGGG
CGGCTCACCTCAGCCGAACCTGCCCCCGGGGTTCCGGTTCCATCCCACAG
ATGAAGAGCTGGTGGTTCACTACCTCAAGAAGAAAGCAAGCTCAGCTCCT
CTCCCAGTTTCAATTATTGCGGAAGTTGATTTGTACAAGTTTGATCCATG
GGAGCTTCCAGCTAAGGCAACATTTGGAGAGCAAGAATGGTACTTCTTTA
GCCCTAGGGACAGGAAGTATCCGAACGGGGCGAGGCCAAACAGAGCAGCA
ACTTCAGGATATTGGAAGGCTACCGGAACAGATAAGCCAGTGATGAGTTC
AGGGAGTAATCAAAAAGTTGGTGTGAAAAAAGCACTTGTATTCTATGGAG
GCAAGCCTCCTAAAGGTATCAAGACCAATTGGATCATGCATGAATATCGC
CTTACCGATAACAAAGTCAGTAACAAGCCCCCTGGTTGTGATTTGGGCAA
CAAAAAGAACTCCCTGAGGCTTGATGACTGGGTGCTATGTCGAATATACA
AAAAAAACAACTTGCATAGGCCATTAATGGATCATGATAAAGATGATTCG
ATGGATGATATGCTTGGAGTACACATACCGCCTTCGCTGATGATTAGTAG
CCAGCAACAGAATACAAATTTGAAGCTGCATATGCCGACTAGGG
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