FC932375

Overview
NameFC932375
Unique NameFC932375
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932375 vs. ExPASy Swiss-Prot
Match: N6MT2_HUMAN (N(6)-adenine-specific DNA methyltransferase 2 OS=Homo sapiens GN=N6AMT2 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.259e-42
Identity = 91/204 (44.61%), Postives = 122/204 (59.80%), Query Frame = 3
Query:  105 PMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDXXXXXXXXXXXXSLCSDSDSRVACIACPTLYAYLKKI-RPEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELK-HAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPXAL*QLGNEFRLFTN 710
            P LS+ ALAALQEF +EQ Q  E      E D   + ++ E+W+LSQFWY             +   +   R+AC++ P++Y  L+++ R   S  I EYD RF  YG +F FYDYN P DLP  +  H+F +V+ DPPYLS+ECL K SETV +L R    K+LL TG + +E+AAELLG++ C F P     L NEFR + N
Sbjct:   10 PQLSAHALAALQEFYAEQKQQIEPG----EDDKYNIGIIEENWQLSQFWYSQETALQLAQEAIAAVGEG-GRIACVSAPSVYQKLRELCRENFSIYIFEYDKRFAMYGEEFIFYDYNNPLDLPERIAAHSFDIVIADPPYLSEECLRKTSETVKYLTR---GKILLCTGAIMEEQAAELLGVKMCTFVPRHTRNLANEFRCYVN 205          
BLAST of FC932375 vs. ExPASy Swiss-Prot
Match: N6MT2_MOUSE (N(6)-adenine-specific DNA methyltransferase 2 OS=Mus musculus GN=N6amt2 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.604e-41
Identity = 91/204 (44.61%), Postives = 122/204 (59.80%), Query Frame = 3
Query:  105 PMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDXXXXXXXXXXXXSLCSDSDSRVACIACPTLYAYLKKI-RPEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELK-HAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPXAL*QLGNEFRLFTN 710
            P LSS  LAALQEF +EQ Q+     N    D   V ++ E+W+LSQFWY                 +   R+AC++ P++Y  L+++ R + S  I EYD RF  YG +F FYDYN P +LP  +  H+F +VV DPPYLS+ECL K SET+ FL R    K+LL TG + +E+AA+LLG++ C F P     L NEFR +TN
Sbjct:   10 PQLSSHTLAALQEFYAEQKQSV----NPRGDDKYNVGVIEENWQLSQFWYSQDTALRLAREAIDAAGEG-GRIACVSAPSVYQKLRELCREDSSVYIFEYDRRFAIYGDEFIFYDYNHPLELPERIAAHSFDLVVADPPYLSEECLRKTSETIQFLTR---GKILLCTGAIMEEQAAQLLGVKMCKFIPEHSRNLANEFRCYTN 205          
BLAST of FC932375 vs. ExPASy Swiss-Prot
Match: N6MT2_XENLA (N(6)-adenine-specific DNA methyltransferase 2 OS=Xenopus laevis GN=n6amt2 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.796e-40
Identity = 89/204 (43.63%), Postives = 124/204 (60.78%), Query Frame = 3
Query:  105 PMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDXXXXXXXXXXXXSLCSDSDSRVACIACPTLYAYLKKIRPE-VSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELK-HAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPXAL*QLGNEFRLFTN 710
            P LSS ALAALQEF +EQ Q  E  +   + +   V  V EDW+LSQFWY              +C ++  R+ACI+ P++Y  L+ +  E V  ++LEYD RF  YG DF FYDYN+P  LP  L+  +F +V+ DPPYLS+ECL+  ++T+  L+R    K++L TG V ++ AA+ LGL+ C F P     L NEFR ++N
Sbjct:   11 PQLSSHALAALQEFYAEQQQR-EAQKLGPDHEKFSVGSVEEDWQLSQFWYSDETALSLAKEAIEVCGEN-GRIACISAPSIYQKLRGLAGESVYIRLLEYDNRFAVYGDDFVFYDYNEPLKLPESLEPSSFDIVIADPPYLSEECLQNTAQTIKHLSR---GKIILCTGAVMEDLAAQKLGLKKCKFIPEHTRNLANEFRCYSN 209          
BLAST of FC932375 vs. ExPASy Swiss-Prot
Match: N6MT2_BOVIN (N(6)-adenine-specific DNA methyltransferase 2 OS=Bos taurus GN=N6AMT2 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.796e-40
Identity = 90/204 (44.12%), Postives = 120/204 (58.82%), Query Frame = 3
Query:  105 PMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDXXXXXXXXXXXXSLCSDSDSRVACIACPTLYAYLK-KIRPEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELK-HAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPXAL*QLGNEFRLFTN 710
            P LSS ALAALQEF +EQ        +    D   + ++ E+W+LSQFWY             +   +   R+AC++ P++Y  L+ + R +VS  I EYD RF  YG DF +YDY  P DLP  +  H+F +VV DPPYLS+ECL K+SET+  L R    K+LL TG V ++ AA+LLG++ C F P     LGNEFR F N
Sbjct:   10 PQLSSYALAALQEFYAEQQHHHS---DLCGDDKYNIGIIEENWQLSQFWYSPETATCLAEDAVAAAGEG-GRIACVSAPSVYQKLRERHRDDVSVCIFEYDRRFAIYGEDFVYYDYKNPVDLPERIATHSFDIVVADPPYLSEECLRKMSETIKLLTR---GKILLCTGAVMEDAAAKLLGVKMCKFIPEHTRTLGNEFRCFVN 206          
BLAST of FC932375 vs. ExPASy Swiss-Prot
Match: N6MT2_CHICK (N(6)-adenine-specific DNA methyltransferase 2 OS=Gallus gallus GN=N6AMT2 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.851e-37
Identity = 87/204 (42.65%), Postives = 119/204 (58.33%), Query Frame = 3
Query:  105 PMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDXXXXXXXXXXXXSLCSDSDSRVACIACPTLYAYLKKIR-PEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLEL-KHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPXAL*QLGNEFRLFTN 710
            P LSS  LAALQEF  EQ Q  E  +     +   V  + EDW+LSQFWY              + +    R+AC++ P++Y  L++    + S  ILEYD RF  YG +F FYDYN P +LP  L  H+F +VV DPPYLS+ECL+K +ET+ +L +    K+LL TG + +E+AA+ LG++ C F P     L NEFR + N
Sbjct:    9 PQLSSHTLAALQEFYLEQQQR-EGMKTSQGFNQYSVGSIEEDWQLSQFWYSDETASCLANEAI-VAAGKGGRIACVSAPSVYQKLREQGGADFSVCILEYDRRFSVYGEEFIFYDYNNPLNLPEHLLPHSFDIVVADPPYLSEECLQKTAETIKYLTK---GKILLCTGAIMEEQAAKHLGVKICKFIPKHSRNLANEFRCYVN 207          
BLAST of FC932375 vs. ExPASy Swiss-Prot
Match: N6MT2_DANRE (N(6)-adenine-specific DNA methyltransferase 2 OS=Danio rerio GN=n6amt2 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.617e-27
Identity = 66/163 (40.49%), Postives = 91/163 (55.83%), Query Frame = 3
Query:  237 LSQFWYDXXXXXXXXXXXXSLCSDSDSRVACIACPTLYAYLKKIRPE----VSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLE-LKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPXAL*QLGNEFRLFTN 710
            +SQFWY                 +   R+AC++ P++Y  LK++       VS  +LE+D RF  YG +F FYDYN P  LP + L  +F +V+ DPPYLS+ECL KV+ TV  L +    K+LL TG + +E A +LL L+ C F P     L NEFR + N
Sbjct:    1 MSQFWYSEETASRLAEELLQQAGEH-GRIACLSAPSVYQKLKQLESVRSDGVSAVLLEFDRRFAAYGDEFVFYDYNNPLCLPEDLLPQSFDIVIADPPYLSEECLSKVTLTVKHLTK---GKILLCTGAIMEEHAGKLLDLKMCSFLPRHNHNLANEFRCYVN 159          
BLAST of FC932375 vs. ExPASy Swiss-Prot
Match: N6MT2_CAEEL (N(6)-adenine-specific DNA methyltransferase 2 homolog OS=Caenorhabditis elegans GN=M142.8 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.125e-26
Identity = 68/211 (32.23%), Postives = 106/211 (50.24%), Query Frame = 3
Query:  105 PMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDXXXXXXXXXXXXSLCSDSD----SRVACIACPTLYAYLKKIRP----EVSPKILEYDMRFE-QYGSDFAFYDYNQPQDLPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPXAL*QLGNEFRLFTN 710
            P LS+  LAAL  F +EQ +  E  Q      S  +  + EDW+LSQFWYD            +   +      +R+ C++ PTL  +  +       ++   + E+D RF  ++ ++F  YDY  P DLP EL   F V++ DPP+L+ ECL K + ++  L +  D K+LL TG + ++ A+ L+ +    F P     L N+F  F N
Sbjct:    8 PQLSADTLAALSMFQAEQQEKIEQLQ------SGIIEKIDEDWQLSQFWYDDETSRKLVAEGVAAALEGSEARPARIGCVSSPTLVKFFHETEEYKTGQIQLTLFEFDDRFGLKFPTEFVHYDYKHPTDLPAELLAKFDVIIADPPFLAAECLIKTAHSIRLLGK-SDVKVLLCTGAIMEDYASRLMAMHRTSFEPRHANNLANDFSCFAN 211          
BLAST of FC932375 vs. ExPASy Swiss-Prot
Match: N6MT2_DROME (N(6)-adenine-specific DNA methyltransferase 2 homolog OS=Drosophila melanogaster GN=CG9154 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.507e-26
Identity = 72/209 (34.45%), Postives = 109/209 (52.15%), Query Frame = 3
Query:  111 LSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDXXXXXXXXXXXXSLCSD-----SDSRVACIACPTLYAYLKKIRPEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELK---HAFSVVVVDPPYLSKECLEKVSETVSFLAR-PGDSKLLLLTGEVQKERAAELLGLRPCGFRPXAL*QLGNEFRLFTN 710
            L +  LA L EFL E+++     +N+  + + + A   EDW+LSQFWY              L ++      D  +A ++CP+LY  +++I   V   I E+D RFE YG+DF  YD N     P  LK     + ++V DPP+LS+EC+ K  E ++ L R   +SK++L +GEV +      L +  C FRP     LGN+F  + N
Sbjct:    7 LPADTLAILNEFLLERSKREAEEENQIANKTGKDAQFEEDWQLSQFWYSTETKHALRDVVRKLLAERTEDSGDFSIALLSCPSLYKDIREIHDTV--HIFEFDKRFEAYGTDFVHYDLNCVGSNPDYLKEHHQQYDLIVADPPFLSQECIAKTCEIITRLQRNQKESKVILCSGEVVEPWLTARLPVLKCSFRPEHERNLGNKFVSYAN 213          
BLAST of FC932375 vs. ExPASy Swiss-Prot
Match: N6MT2_DICDI (N(6)-adenine-specific DNA methyltransferase 2 homolog OS=Dictyostelium discoideum GN=DDB_G0272708 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.389e-23
Identity = 67/188 (35.64%), Postives = 103/188 (54.79%), Query Frame = 3
Query:  111 LSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDXXXXXXXXXXXXSLCSDSDSRVACIACPTLYAYLKKIRPEV-SPKILEYDMRFEQYGSDFAFYDYNQPQD-LPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELL-GLRPCGFRP 665
            LS ++L+ALQ+F   +       Q+K E        +SEDW+LSQFWY+                  +  V C++ P++Y  L K    + +  + EYD RF+ YG  F FYDYN P+D +  +LK     + +DPP+LS+EC+EKV++T++ L +P  ++LLLLTG +Q     + L  +  C F P
Sbjct:   11 LSKESLSALQDFYKSREVEQ---QDKFE--------ISEDWQLSQFWYEEETSKFVANVIEQETIGGNV-VVCLSTPSIYKVLHKNNNLLLNNNLFEYDKRFDVYGEKFHFYDYNNPEDGISEQLKGNVDYICLDPPFLSEECIEKVAKTIALLRKP-TTRLLLLTGRIQWNNIQKYLPEMMICEFEP 185          
BLAST of FC932375 vs. ExPASy Swiss-Prot
Match: AML1_YEAST (N(6)-adenine-specific DNA methyltransferase-like 1 OS=Saccharomyces cerevisiae GN=AML1 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.205e-20
Identity = 74/226 (32.74%), Postives = 111/226 (49.12%), Query Frame = 3
Query:  111 LSSQALAALQEFLSEQNQTSETAQ---NKTESD------SDEVALVSEDWRLSQFWYDXXXXXXXXXXXXSLCSDSDSRVACIACPTLYAYLKKIRPEVSPK----ILEYDMRFEQY-GSD-FAFYDYNQPQDLPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDS----------KLLLLTGEVQKERAAELLG-LRPCGFRPXAL*QLGNEFRLFTN 710
            LS+ ALAAL+EF  E+ Q  E  Q   ++T+ D       + + L  EDW+LSQFWY                +D ++ +A ++ P++YA ++K      P     + E+D RFE   G D F FYDYN+P D   E+K     +++DPP+L+++C  K S T   L  P D+          +L+  TGE   E  +++    R   F P     L NEFR + N
Sbjct:   14 LSANALAALEEFKREEQQHQEAFQKLYDETDEDFQKKKKEEGMKLFKEDWQLSQFWYSDDTAAILADAILE-GADENTVIAIVSAPSVYAAIQKKPTNEIPTEHIYLFEFDKRFELLAGRDHFFFYDYNKPLDFSDEIKGKVDRLLIDPPFLNEDCQTKSSITAKCLLAPNDNSKTKKGVFKHRLISCTGERMSEVISKVYSDTRITTFLPEHSNGLSNEFRCYAN 238          
The following BLAST results are available for this feature:
BLAST of FC932375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
N6MT2_HUMAN3.259e-4244.61N(6)-adenine-specific DNA methyltransferase 2 OS=H... [more]
N6MT2_MOUSE3.604e-4144.61N(6)-adenine-specific DNA methyltransferase 2 OS=M... [more]
N6MT2_XENLA6.796e-4043.63N(6)-adenine-specific DNA methyltransferase 2 OS=X... [more]
N6MT2_BOVIN6.796e-4044.12N(6)-adenine-specific DNA methyltransferase 2 OS=B... [more]
N6MT2_CHICK1.851e-3742.65N(6)-adenine-specific DNA methyltransferase 2 OS=G... [more]
N6MT2_DANRE8.617e-2740.49N(6)-adenine-specific DNA methyltransferase 2 OS=D... [more]
N6MT2_CAEEL1.125e-2632.23N(6)-adenine-specific DNA methyltransferase 2 homo... [more]
N6MT2_DROME2.507e-2634.45N(6)-adenine-specific DNA methyltransferase 2 homo... [more]
N6MT2_DICDI3.389e-2335.64N(6)-adenine-specific DNA methyltransferase 2 homo... [more]
AML1_YEAST1.205e-2032.74N(6)-adenine-specific DNA methyltransferase-like 1... [more]
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Properties
Property NameValue
Genbank descriptionC34207H11EF PostHarveN Citrus clementina cDNA clone C34207H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932375 ID=FC932375; Name=FC932375; organism=Citrus clementina; type=EST; length=710bp
GACAGCAGCCGCGGCAGCCAAAAGTAACCAAAATGGAGGAGCTCAAAGAA
AACAAAATGCACCTAAAAAACGACGACGTTGAAGTCGAAGAGGATGATGA
CCGGCCGATGCTGAGCTCTCAAGCTTTGGCAGCTCTTCAGGAATTCCTTT
CAGAACAAAACCAAACTTCGGAAACTGCTCAAAATAAAACAGAATCAGAC
TCAGATGAGGTGGCGTTAGTGTCGGAGGACTGGAGGCTGAGCCAGTTCTG
GTACGACGCTGTGACGGCAGAGACTGTAGCTCAAGAAGCCGTTTCTCTTT
GTAGTGATTCCGATTCTCGCGTTGCCTGTATTGCTTGCCCCACACTCTAC
GCTTACTTAAAGAAAATTAGACCTGAGGTGTCGCCGAAAATACTTGAATA
CGACATGCGTTTTGAGCAATACGGAAGTGATTTTGCGTTTTATGATTATA
ATCAACCGCAAGATTTGCCATTGGAGCTCAAGCATGCTTTCAGTGTTGTT
GTCGTAGATCCACCTTATCTGAGCAAGGAGTGTCTGGAGAAAGTAAGTGA
AACAGTTTCTTTTCTTGCTAGACCAGGGGATTCGAAGTTGCTTCTACTCA
CAGGTGAGGTGCAGAAGGAGAGAGCTGCAGAGCTTTTAGGTTTGCGTCCG
TGTGGTTTTAGACCACNAGCACTCTAGCAACTTGGGAATGAATTTCGACT
ATTCACAAAC
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