FC932380

Overview
NameFC932380
Unique NameFC932380
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length753
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932380 vs. ExPASy Swiss-Prot
Match: FUT1_ARATH (Galactoside 2-alpha-L-fucosyltransferase OS=Arabidopsis thaliana GN=FUT1 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 7.756e-41
Identity = 68/107 (63.55%), Postives = 80/107 (74.77%), Query Frame = 1
Query:  328 LSSDKLLGGLLAPNFTKRDCLSRYQSISYRKSSPYVPSLYLVSKLREYEKLHNRCGPDTESYKNSIKDMVSGQNDSSSECRYVVWIARAGLGNRILSIASAFLMLFL 648
            ++SDKLLGGLLA  F +  CLSRYQS+ YRK SPY PS YL+SKLR YEKLH RCGP TESYK ++K +     D   EC+YVVWI+ +GLGNRILS+AS FL   L
Sbjct:   92 INSDKLLGGLLASGFDEDSCLSRYQSVHYRKPSPYKPSSYLISKLRNYEKLHKRCGPGTESYKKALKQLDQEHIDGDGECKYVVWISFSGLGNRILSLASVFLYALL 198          

HSP 2 Score: 45.0542 bits (105), Expect = 7.756e-41
Identity = 19/32 (59.38%), Postives = 24/32 (75.00%), Query Frame = 2
Query:  650 NRVLLIDEEPEMANLFCEPFPKCTWLLPKDFP 745
            +RVLL+D   +M +LFCEPF   +WLLP DFP
Sbjct:  200 DRVLLVDRGKDMDDLFCEPFLGMSWLLPLDFP 231          
BLAST of FC932380 vs. ExPASy Swiss-Prot
Match: FUT8_ARATH (Probable fucosyltransferase 8 OS=Arabidopsis thaliana GN=FUT8 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 6.255e-37
Identity = 65/114 (57.02%), Postives = 78/114 (68.42%), Query Frame = 1
Query:  319 ENQLSSDKLLGGLLAPNFTKRDCLSRYQSISYRKSSPYVPSLYLVSKLREYEKLHNRCGPDTESYKNSIK----DMVSGQNDSSSECRYVVWIARAGLGNRILSIASAFLMLFL 648
            +++ S DKLLGGLL  +F +  CLSRY+S  YRK SPY PS YLVSKLR YE LH RCGP TE+YK + +    D  +    S  ECRY+VWIA  GLGNRIL++AS FL   L
Sbjct:   23 DSRKSKDKLLGGLLTADFDEDSCLSRYESSLYRKPSPYKPSRYLVSKLRSYEMLHKRCGPGTEAYKKATEILGHDDENHSTKSVGECRYIVWIAVYGLGNRILTLASLFLYALL 136          

HSP 2 Score: 48.9062 bits (115), Expect = 6.255e-37
Identity = 17/32 (53.12%), Postives = 27/32 (84.38%), Query Frame = 2
Query:  650 NRVLLIDEEPEMANLFCEPFPKCTWLLPKDFP 745
            +R++L+D+  ++++LFCEPFP  +WLLP DFP
Sbjct:  138 DRIMLVDQRTDISDLFCEPFPGTSWLLPLDFP 169          
BLAST of FC932380 vs. ExPASy Swiss-Prot
Match: FUT1_PEA (Galactoside 2-alpha-L-fucosyltransferase OS=Pisum sativum GN=FT1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.136e-37
Identity = 69/151 (45.70%), Postives = 96/151 (63.58%), Query Frame = 1
Query:  196 VLFILVLICRDRGLNPFIGAEDDLSKLIREDEPTSEDEINGENQLSSDKLLGGLLAPNFTKRDCLSRYQSISYRKSSPYVPSLYLVSKLREYEKLHNRCGPDTESYKNSIKDMVSGQNDSSSECRYVVWIARAGLGNRILSIASAFLMLFL 648
            VLF L ++ RD    P   A    + L + ++    D+ +   +L +DKLLGGLLA  F ++ CLSRYQS  + K     PS YL+S+LR+YE  H +CGP TESY  ++K++ SGQ   S +C+YVVWI+ +GLGNRIL++ SAFL   L
Sbjct:   57 VLFSLSVVLRDP---PSDAAISSTTTLFQLNQGLGSDDFDSV-ELLNDKLLGGLLADGFDEKSCLSRYQSAIFGKGLSGKPSSYLISRLRKYEARHKQCGPYTESYNKTVKELGSGQFSESVDCKYVVWISFSGLGNRILTLVSAFLYALL 203          

HSP 2 Score: 47.3654 bits (111), Expect = 8.136e-37
Identity = 18/32 (56.25%), Postives = 24/32 (75.00%), Query Frame = 2
Query:  650 NRVLLIDEEPEMANLFCEPFPKCTWLLPKDFP 745
            +RVLL+D   +M +LFCEPFP  +W +P DFP
Sbjct:  205 DRVLLVDPGVDMTDLFCEPFPDASWFVPPDFP 236          
BLAST of FC932380 vs. ExPASy Swiss-Prot
Match: FUT6_ARATH (Fucosyltransferase 6 OS=Arabidopsis thaliana GN=FUT6 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.344e-36
Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 1
Query:  310 INGENQLSSDKLLGGLLAPNFTKRDCLSRYQ-SISYRKSSPYVPSLYLVSKLREYEKLHNRCGPDTESYKNSIKDMVSGQND------SSSECRYVVWIARAGLGNRILSIASAFLMLFL 648
            ++ E++   D+L+GGLL  +F +  CLSRYQ S+ YRK+SPY PS YLVSKLR YEKLH RCGP T++YK + +  + G +D      S  ECRY+VW+A  GLGNRIL++AS FL   L
Sbjct:   55 VSRESETPRDRLIGGLLTADFDEGSCLSRYQQSLLYRKASPYKPSEYLVSKLRSYEKLHKRCGPGTDAYKKATE--ILGHDDENYASKSVGECRYIVWVAVYGLGNRILTLASVFLYALL 172          

HSP 2 Score: 48.9062 bits (115), Expect = 2.344e-36
Identity = 18/33 (54.55%), Postives = 27/33 (81.82%), Query Frame = 2
Query:  653 RVLLIDEEPEMANLFCEPFPKCTWLLPKDFPFM 751
            RV+L+D+  ++++LFCEPFP  +WLLP +FP M
Sbjct:  175 RVVLVDQSKDISDLFCEPFPGTSWLLPLEFPLM 207          
BLAST of FC932380 vs. ExPASy Swiss-Prot
Match: FUT2_ARATH (Fucosyltransferase 2 OS=Arabidopsis thaliana GN=FUT2 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.492e-35
Identity = 76/176 (43.18%), Postives = 104/176 (59.09%), Query Frame = 1
Query:  169 IAVLSIALPV-LFILVLICRDRG-----------LNPFIGAEDDLSKLIREDEPTSEDEINGENQLSSD-KLLGGLLAPNFTKRDCLSRYQSISYRKSSPYVPSLYLVSKLREYEKLHNRCGPDTESYKNS---IKDMVSGQNDSSSECRYVVWIARAGLGNRILSIASAFLMLFL 648
            +A+  + +PV L I+ +   D+G           + P + +  D S L++ D+         E + S D  LLGGLL   F K  CLSRYQS  YRK+SPY PSL+L+SKLR YE+LH RCGP T  Y N+   +K   +G+ +S   C+YVVW++ +GLGNRI+SIAS FL   L
Sbjct:    7 LALFMVLVPVSLVIVAMFGYDQGNGFVQASRFITMEPNVTSSSDDSSLVQRDQ---------EQKDSVDMSLLGGLLVSGFKKESCLSRYQSYLYRKASPYKPSLHLLSKLRAYEELHKRCGPGTRQYTNAERLLKQKQTGEMESQG-CKYVVWMSFSGLGNRIISIASVFLYAML 172          

HSP 2 Score: 45.0542 bits (105), Expect = 1.492e-35
Identity = 19/31 (61.29%), Postives = 24/31 (77.42%), Query Frame = 2
Query:  650 NRVLLIDEEPEMANLFCEPFPKCTWLLPKDF 742
            +RVLL++   + A+LFCEPF   TWLLPKDF
Sbjct:  174 DRVLLVEGGEQFADLFCEPFLDTTWLLPKDF 204          
BLAST of FC932380 vs. ExPASy Swiss-Prot
Match: FUT5_ARATH (Probable fucosyltransferase 5 OS=Arabidopsis thaliana GN=FUT5 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.297e-35
Identity = 62/112 (55.36%), Postives = 77/112 (68.75%), Query Frame = 1
Query:  319 ENQLSSDKLLGGLLAPNFTKRDCLSRYQS-ISYRKSSPYVPSLYLVSKLREYEKLHNRCGPDTESYKNSIKDMV-SGQNDSSSECRYVVWIARAGLGNRILSIASAFLMLFL 648
            E +   DKL+GGLL  +F +  CLSRY     YRK SPY PS YLVSKLR YE LH RCGPDTE YK +I+ +     ++S+ ECRY+VW+A  GLGNR+L++AS FL   L
Sbjct:   55 ETEKPVDKLIGGLLTADFDEGSCLSRYHKYFLYRKPSPYKPSEYLVSKLRSYEMLHKRCGPDTEYYKEAIEKLSRDDASESNGECRYIVWVAGYGLGNRLLTLASVFLYALL 166          

HSP 2 Score: 46.2098 bits (108), Expect = 3.297e-35
Identity = 16/33 (48.48%), Postives = 25/33 (75.76%), Query Frame = 2
Query:  653 RVLLIDEEPEMANLFCEPFPKCTWLLPKDFPFM 751
            R++L+D   ++++L CEPFP  +WLLP DFP +
Sbjct:  169 RIILVDNRKDVSDLLCEPFPGTSWLLPLDFPML 201          
BLAST of FC932380 vs. ExPASy Swiss-Prot
Match: FUT7_ARATH (Probable fucosyltransferase 7 OS=Arabidopsis thaliana GN=FUT7 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.594e-35
Identity = 59/108 (54.63%), Postives = 74/108 (68.52%), Query Frame = 1
Query:  337 DKLLGGLLAPNFTKRDCLSRYQSISYRKSSPYVPSLYLVSKLREYEKLHNRCGPDTESYKNSIK----DMVSGQNDSSSECRYVVWIARAGLGNRILSIASAFLMLFL 648
            D+LLGGLL  +F +  CLSRYQS  YRK SPY  S YL+SKLR YE LH RCGP T++YK + +    D  +  + S  EC+Y+VW+A  GLGNRIL++AS FL   L
Sbjct:   49 DRLLGGLLTADFDEDSCLSRYQSSLYRKPSPYRTSEYLISKLRNYEMLHKRCGPGTDAYKRATEKLGHDHENVGDSSDGECKYIVWVAVYGLGNRILTLASVFLYALL 156          

HSP 2 Score: 50.447 bits (119), Expect = 5.594e-35
Identity = 18/33 (54.55%), Postives = 27/33 (81.82%), Query Frame = 2
Query:  653 RVLLIDEEPEMANLFCEPFPKCTWLLPKDFPFM 751
            R++L+D+  ++++LFCEPFP  +WLLP DFP M
Sbjct:  159 RIILVDQRKDISDLFCEPFPGTSWLLPLDFPLM 191          
BLAST of FC932380 vs. ExPASy Swiss-Prot
Match: FUT10_ARATH (Putative fucosyltransferase 10 OS=Arabidopsis thaliana GN=FUT10 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 5.595e-35
Identity = 59/114 (51.75%), Postives = 81/114 (71.05%), Query Frame = 1
Query:  319 ENQLSSDKLLGGLLAPNFTKRDCLSRYQS-ISYRKSSPYVPSLYLVSKLREYEKLHNRCGPDTESYKNSIKDMVSGQ---NDSSSECRYVVWIARAGLGNRILSIASAFLMLFL 648
            E++   DKL+GGLL  +F +  CLSRY     YRK SPY+PS YLVS+LR YE LH RCGPDT++YK + + +   +   ++S+ ECRY+VW+AR GLGNR++++AS FL   L
Sbjct:   36 ESERPVDKLIGGLLTADFDEGSCLSRYHKYFLYRKPSPYMPSEYLVSELRSYEMLHKRCGPDTKAYKEATEKLSRDEYYASESNGECRYIVWLARDGLGNRLITLASVFLYAIL 149          

HSP 2 Score: 46.2098 bits (108), Expect = 5.595e-35
Identity = 16/33 (48.48%), Postives = 25/33 (75.76%), Query Frame = 2
Query:  653 RVLLIDEEPEMANLFCEPFPKCTWLLPKDFPFM 751
            R++L+D   ++++L CEPFP  +WLLP DFP +
Sbjct:  152 RIILVDNRKDVSDLLCEPFPGTSWLLPLDFPML 184          
BLAST of FC932380 vs. ExPASy Swiss-Prot
Match: FUT9_ARATH (Probable fucosyltransferase 9 OS=Arabidopsis thaliana GN=FUT9 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 2.100e-34
Identity = 72/160 (45.00%), Postives = 95/160 (59.38%), Query Frame = 1
Query:  178 LSIALPVLFILVLICRDRGLNPFIGAEDDLSKLIREDEPTSEDEINGENQLSSDKLLGGLLAPNFTKRDCLSRYQSISYRKSSPYVPSLYLVSKLREYEKLHNRCGPDTESYKNSIKDMVSGQNDSSS---ECRYVVWIARAGLGNRILSIASAFLMLFL 648
            L+IA+    +L L+         +    ++S   + D PT+   +N   Q  S+KLLGGLLA  F ++ CLSRY   S  K SPY PS ++VSKLR YE LH RCGP T++YK + K +  G N+ SS   ECRYVVW+   GLGNR+LS+ S FL   L
Sbjct:    4 LTIAIATCLVLCLV--------LLLPSSNISYRHKYDLPTNG--LNDSEQ-QSEKLLGGLLATGFEEKSCLSRYDQ-SMSKPSPYKPSRHIVSKLRSYEMLHKRCGPGTKAYKRATKQL--GHNELSSSGDECRYVVWMPMFGLGNRMLSLVSVFLYALL 149          

HSP 2 Score: 49.6766 bits (117), Expect = 2.100e-34
Identity = 18/32 (56.25%), Postives = 27/32 (84.38%), Query Frame = 2
Query:  650 NRVLLIDEEPEMANLFCEPFPKCTWLLPKDFP 745
            +RV+L+D+  ++ +LFCEPFP+ +WLLP DFP
Sbjct:  151 DRVMLVDQRNDITDLFCEPFPETSWLLPLDFP 182          
BLAST of FC932380 vs. ExPASy Swiss-Prot
Match: FUT4_ARATH (Probable fucosyltransferase 4 OS=Arabidopsis thaliana GN=FUT4 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.559e-34
Identity = 60/109 (55.05%), Postives = 75/109 (68.81%), Query Frame = 1
Query:  337 DKLLGGLLAPNFTKRDCLSRY-QSISYRKSSPYVPSLYLVSKLREYEKLHNRCGPDTESYKNSIKDMVSGQN----DSSSECRYVVWIARAGLGNRILSIASAFLMLFL 648
            D+L+GGLL  +F +  CLSRY ++  YRK SPY PS YLVSKLR YE LH RCGP T++YK + K +   +N     S  ECRYVVW+A  GLGNR+L++AS FL   L
Sbjct:   31 DRLIGGLLTADFDEGSCLSRYHKTFLYRKPSPYKPSEYLVSKLRSYEMLHKRCGPGTKAYKEATKHLSHDENYNASKSDGECRYVVWLADYGLGNRLLTLASVFLYALL 139          

HSP 2 Score: 47.3654 bits (111), Expect = 3.559e-34
Identity = 17/34 (50.00%), Postives = 25/34 (73.53%), Query Frame = 2
Query:  650 NRVLLIDEEPEMANLFCEPFPKCTWLLPKDFPFM 751
            +R++L+D   ++ +L CEPFP  +WLLP DFP M
Sbjct:  141 DRIILVDNRKDIGDLLCEPFPGTSWLLPLDFPLM 174          
The following BLAST results are available for this feature:
BLAST of FC932380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
FUT1_ARATH7.756e-4163.55Galactoside 2-alpha-L-fucosyltransferase OS=Arabid... [more]
FUT8_ARATH6.255e-3757.02Probable fucosyltransferase 8 OS=Arabidopsis thali... [more]
FUT1_PEA8.136e-3745.70Galactoside 2-alpha-L-fucosyltransferase OS=Pisum ... [more]
FUT6_ARATH2.344e-3653.33Fucosyltransferase 6 OS=Arabidopsis thaliana GN=FU... [more]
FUT2_ARATH1.492e-3543.18Fucosyltransferase 2 OS=Arabidopsis thaliana GN=FU... [more]
FUT5_ARATH3.297e-3555.36Probable fucosyltransferase 5 OS=Arabidopsis thali... [more]
FUT7_ARATH5.594e-3554.63Probable fucosyltransferase 7 OS=Arabidopsis thali... [more]
FUT10_ARATH5.595e-3551.75Putative fucosyltransferase 10 OS=Arabidopsis thal... [more]
FUT9_ARATH2.100e-3445.00Probable fucosyltransferase 9 OS=Arabidopsis thali... [more]
FUT4_ARATH3.559e-3455.05Probable fucosyltransferase 4 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionC34208A04EF PostHarveN Citrus clementina cDNA clone C34208A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932380 ID=FC932380; Name=FC932380; organism=Citrus clementina; type=EST; length=753bp
GTTGCAGTTGCCAGCGTGCCAAAACACTTTTGCTCCACATAAAATATTAT
GCCTACTTCCATTTTGCTCCACACAAATCAAACCATCCGTTTTCAATTTA
TCTCCTTATAATCTTTCTTATTATTCCATCTTCATCGGGTGCGTTGGAGC
ATGACACGGTTTCCAAAAATTGCTGTCCTGTCAATAGCTTTGCCTGTCTT
ATTCATACTTGTTTTGATTTGCAGAGATAGAGGGTTGAATCCGTTCATTG
GTGCTGAAGACGACTTATCTAAGCTTATCAGAGAGGATGAACCCACCAGT
GAGGATGAAATCAATGGTGAGAATCAACTCAGCAGTGACAAACTTCTTGG
TGGGCTTCTTGCACCAAACTTCACGAAAAGAGATTGCTTAAGCAGGTACC
AATCCATCTCATATCGAAAATCTTCGCCATATGTGCCTTCTTTGTACCTT
GTTTCCAAGCTACGAGAATATGAAAAGCTTCATAATAGATGCGGACCTGA
CACAGAGTCATACAAGAACAGCATAAAAGACATGGTATCTGGTCAAAATG
ACAGTTCCTCCGAGTGTAGATACGTTGTTTGGATAGCCAGAGCCGGCCTG
GGAAACAGAATATTGAGCATAGCATCAGCTTTTCTTATGCTCTTCTTACA
ACCGAGTTCTGCTCATTGATGAAGAACCTGAAATGGCCAATCTGTTCTGT
GAGCCATTTCCAAAATGCACATGGTTGTTGCCAAAGGACTTTCCCTTCAT
GTA
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