FC932384

Overview
NameFC932384
Unique NameFC932384
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15499 contig Ccv1_Contig15499:1..688. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH_ARATH (S-formylglutathione hydrolase OS=Arabidopsis thaliana GN=SFGH PE=1 SV=2)

HSP 1 Score: 339.347 bits (869), Expect = 1.113e-92
Identity = 160/194 (82.47%), Postives = 172/194 (88.66%), Query Frame = 2
Query:  104 TEISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            +EI S+KMF GYNKR+KHFS TLGCSM F IYF       +K PVLYWLSGLTCTDENFI KSGAQRAAS  G+AL+APDTSPRGLNVEGEADS+DFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSENF QL+T++ASI GHSMGGHGALTIYL+NLDKYKSVSAFAPI NP+NC WGQKAFT YLG NK
Sbjct:    6 SEIGSTKMFDGYNKRYKHFSETLGCSMTFSIYFPPSASSSHKSPVLYWLSGLTCTDENFIIKSGAQRAASTHGIALVAPDTSPRGLNVEGEADSYDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSENFSQLDTTKASISGHSMGGHGALTIYLRNLDKYKSVSAFAPITNPINCAWGQKAFTNYLGDNK 199          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: ESTD_BOVIN (S-formylglutathione hydrolase OS=Bos taurus GN=ESD PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.801e-66
Identity = 120/194 (61.86%), Postives = 149/194 (76.80%), Query Frame = 2
Query:  107 EISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            ++SSSK FGG  K F+H S  L C M F +Y         K PVLYWLSGLTCT++NFI+KSG  +AAS  G+ +IAPDTSPRG N++GE DSWDFG GAGFY++AT++ WK N+RMY YV KELP+L+++NFP ++  R S+FGHSMGGHGAL   LKN  KYKSVSAFAP+CNPV C WG+KAFT YLG+++
Sbjct:    5 QVSSSKCFGGLQKVFEHDSVELKCKMKFAVYLPPKAETG-KCPVLYWLSGLTCTEQNFISKSGYHQAASEHGLVVIAPDTSPRGCNIKGEEDSWDFGTGAGFYVDATEDLWKTNYRMYSYVTKELPQLVNDNFP-VDPQRMSVFGHSMGGHGALICALKNPGKYKSVSAFAPLCNPVLCRWGKKAFTGYLGTDQ 196          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: ESTD_RAT (S-formylglutathione hydrolase OS=Rattus norvegicus GN=Esd PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.979e-65
Identity = 123/200 (61.50%), Postives = 149/200 (74.50%), Query Frame = 2
Query:   89 METKPTEISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            ME K  +ISS+K FGG  K F+H S  L C M F IY         K P LYWLSGLTCT++NFI+KSG Q+AAS  G+ +IAPDTSPRG N++GE DSWDFG GAGF++NAT++ W  N+RMY YV +ELP+L++ NFP ++  R SIFGHSMGGHGAL   LKN  KY+SVSAFAPICNPV CPWG+KAF  YLG ++
Sbjct:    1 MELK--QISSNKCFGGLQKVFEHSSVELKCKMKFAIYLPPQAESA-KCPALYWLSGLTCTEQNFISKSGCQQAASEHGLVVIAPDTSPRGCNIKGEDDSWDFGTGAGFFVNATEDPWNTNYRMYSYVTEELPQLINANFP-VDPQRISIFGHSMGGHGALICALKNPGKYRSVSAFAPICNPVLCPWGKKAFNGYLGPDQ 196          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: ESTD_PIG (S-formylglutathione hydrolase OS=Sus scrofa GN=ESD PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.408e-65
Identity = 120/194 (61.86%), Postives = 147/194 (75.77%), Query Frame = 2
Query:  107 EISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            ++SS+K FGG  K F+H S  L C M F IY         K P LYWLSGLTCT++NFI KSG  +AAS  G+ +IAPDTSPRG N++GE +SWDFG GAGFYL+AT++ WK N+RMY YV +ELP+L++ NFP ++  R SIFGHSMGGHGAL   LKN  KYKSVSAFAPICNPV CPWG+KAF+ YLG+++
Sbjct:    5 QLSSNKCFGGLQKVFEHDSVELKCKMKFAIYLPPKAETG-KCPALYWLSGLTCTEQNFITKSGYHQAASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYLDATEDPWKTNYRMYSYVTEELPQLINANFP-VDPQRMSIFGHSMGGHGALICTLKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDE 196          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: ESTD_MOUSE (S-formylglutathione hydrolase OS=Mus musculus GN=Esd PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 7.519e-65
Identity = 119/194 (61.34%), Postives = 147/194 (75.77%), Query Frame = 2
Query:  107 EISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            +ISS++ FGG  K F+H S  L C M F +Y         K P LYWLSGLTCT++NFI+KSG Q+AAS  G+ +IAPDTSPRG N++GE DSWDFG GAGFY+NAT++ WK N+RMY YV +ELP+L++ NFP ++  R SIFGHSMGGHGAL   LKN  KY+SVSAFAPICNPV C WG+KAF+ YLG ++
Sbjct:    5 QISSNRCFGGLQKVFEHSSVELKCKMRFAVYLPPQAESG-KCPALYWLSGLTCTEQNFISKSGYQQAASEHGLVVIAPDTSPRGCNIKGEDDSWDFGTGAGFYVNATEDPWKANYRMYSYVTEELPQLINANFP-VDPQRMSIFGHSMGGHGALICALKNPGKYRSVSAFAPICNPVLCSWGKKAFSGYLGPDE 196          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: ESTD_HUMAN (S-formylglutathione hydrolase OS=Homo sapiens GN=ESD PE=1 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 7.519e-65
Identity = 118/194 (60.82%), Postives = 148/194 (76.29%), Query Frame = 2
Query:  107 EISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            +ISS+K FGG  K F+H S  L C M F +Y         K P LYWLSGLTCT++NFI+KSG  ++AS  G+ +IAPDTSPRG N++GE +SWDFG GAGFY++AT++ WK N+RMY YV +ELP+L++ NFP ++  R SIFGHSMGGHGAL   LKN  KYKSVSAFAPICNPV CPWG+KAF+ YLG+++
Sbjct:    5 QISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKAETG-KCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFP-VDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQ 196          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH1_ECOHS (S-formylglutathione hydrolase frmB OS=Escherichia coli O9:H4 (strain HS) GN=frmB PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.589e-52
Identity = 102/193 (52.85%), Postives = 132/193 (68.39%), Query Frame = 2
Query:  110 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            I     FGG+   ++H+S +L C MN  +Y         K PVLYWLSGLTC ++NFI KSG QR A+   + ++APDTSPRG +V  +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+ ++FP   T+R SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YLG NK
Sbjct:    4 IEKHASFGGWQNVYRHYSQSLKCEMNVGVYLPPKAANE-KLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHV-ADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMQHFPA--TTRKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQAPWGQQAFAAYLGENK 192          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH1_SHISS (S-formylglutathione hydrolase frmB OS=Shigella sonnei (strain Ss046) GN=frmB PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.300e-52
Identity = 102/193 (52.85%), Postives = 132/193 (68.39%), Query Frame = 2
Query:  110 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            I     FGG+   ++H+S +L C MN  +Y         K PVLYWLSGLTC ++NFI KSG QR A+   + ++APDTSPRG +V  +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+ ++FP   T+R SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YLG NK
Sbjct:    4 IEKHASFGGWQNVYRHYSQSLKCEMNVGVYLPPKAANE-KLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHV-ADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMQHFPA--TTRKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLGENK 192          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH1_ECOSM (S-formylglutathione hydrolase frmB OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=frmB PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.300e-52
Identity = 102/193 (52.85%), Postives = 132/193 (68.39%), Query Frame = 2
Query:  110 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            I     FGG+   ++H+S +L C MN  +Y         K PVLYWLSGLTC ++NFI KSG QR A+   + ++APDTSPRG +V  +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+ ++FP   T+R SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YLG NK
Sbjct:    4 IEKHASFGGWQNVYRHYSQSLKCEMNVGVYLPPKAGNE-KLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHV-ADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIHNELPDLVMQHFPA--TTRKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLGENK 192          
BLAST of FC932384 vs. ExPASy Swiss-Prot
Match: SFGH1_ECOL6 (S-formylglutathione hydrolase frmB OS=Escherichia coli O6 GN=frmB PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.300e-52
Identity = 102/193 (52.85%), Postives = 131/193 (67.88%), Query Frame = 2
Query:  110 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTYYLGSNK 685
            I     FGG+   ++H+S +L C MN  +Y         K PVLYWLSGLTC ++NFI KSG QR A+   + ++APDTSPRG +V  +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+  +FP   T+R SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YLG NK
Sbjct:    4 IEKHASFGGWQNVYRHYSQSLKCEMNVGVYLPPKAENE-KLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHV-ADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPNLVMHHFPA--TARKSISGHSMGGLGALVLALRNPDEYASVSAFSPIVSPSQVPWGQQAFAAYLGENK 192          
The following BLAST results are available for this feature:
BLAST of FC932384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
SFGH_ARATH1.113e-9282.47S-formylglutathione hydrolase OS=Arabidopsis thali... [more]
ESTD_BOVIN6.801e-6661.86S-formylglutathione hydrolase OS=Bos taurus GN=ESD... [more]
ESTD_RAT1.979e-6561.50S-formylglutathione hydrolase OS=Rattus norvegicus... [more]
ESTD_PIG4.408e-6561.86S-formylglutathione hydrolase OS=Sus scrofa GN=ESD... [more]
ESTD_MOUSE7.519e-6561.34S-formylglutathione hydrolase OS=Mus musculus GN=E... [more]
ESTD_HUMAN7.519e-6560.82S-formylglutathione hydrolase OS=Homo sapiens GN=E... [more]
SFGH1_ECOHS5.589e-5252.85S-formylglutathione hydrolase frmB OS=Escherichia ... [more]
SFGH1_SHISS7.300e-5252.85S-formylglutathione hydrolase frmB OS=Shigella son... [more]
SFGH1_ECOSM7.300e-5252.85S-formylglutathione hydrolase frmB OS=Escherichia ... [more]
SFGH1_ECOL67.300e-5252.85S-formylglutathione hydrolase frmB OS=Escherichia ... [more]

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Properties
Property NameValue
Genbank descriptionC34208A08EF PostHarveN Citrus clementina cDNA clone C34208A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932384 ID=FC932384; Name=FC932384; organism=Citrus clementina; type=EST; length=688bp
GAGTGACTCACTTCACTCTTTAATCTGCTGAAAGAACAAAGATCGTACAC
ACACAGGGAGAGCTCAACACAATCAATCACAGAGAAAAATGGAGACGAAG
CCGACAGAGATAAGCAGTTCTAAGATGTTCGGTGGATACAACAAAAGATT
CAAGCATTTCAGTACAACACTGGGCTGCTCCATGAATTTCCACATCTACT
TCCCTCCTTCTTCTTCTCCATCCTACAAATTCCCTGTGCTTTACTGGCTC
TCTGGTCTTACCTGCACTGATGAAAATTTTATAGCTAAGTCAGGAGCTCA
ACGTGCTGCTTCCGCTGAAGGTGTGGCTCTGATTGCCCCTGATACATCTC
CAAGAGGCCTGAATGTGGAAGGAGAGGCAGATAGCTGGGATTTTGGTGTA
GGTGCTGGATTTTATCTTAATGCTACACAGGAGAAGTGGAAGAACTGGCG
TATGTATGACTATGTTGTCAAGGAATTGCCCAAACTTCTGAGTGAAAATT
TTCCACAGCTTGAAACTTCTCGAGCATCCATATTTGGTCACTCAATGGGT
GGGCATGGTGCTTTGACAATCTATCTGAAAAATCTTGACAAGTATAAGTC
TGTATCTGCCTTTGCTCCAATTTGCAATCCTGTCAACTGTCCCTGGGGTC
AGAAGGCTTTTACATATTATCTTGGTAGTAACAAGCTG
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