FC932386
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932386 vs. ExPASy Swiss-Prot
Match: FB95_ARATH (F-box protein At2g02240 OS=Arabidopsis thaliana GN=At2g02240 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.124e-45 Identity = 94/230 (40.87%), Postives = 134/230 (58.26%), Query Frame = 2 Query: 32 VLPPECISRIISLSTARDACRSSIACPIFKSAADSDYVWEKFLPSDYEQXXXXXXXXXXXXXXXXXXXXYFHLCHNPIIINNGTMSFVLDKESGKKCFMVRAREFYIEWGNTPSYWIWSYLPESRFAEVAELKLVWWFEIKGRIETKILSLKTIYAAYLVFKFVDTRYGFERRPIEFGVHFEGSDTEERYRVVLDLPKDMPQLSQ--------EGEMGWMGDKMGEFFNE 697 VLP +CIS IIS ++ RDAC ++ F+SA SD VW+KFLP +YE YF LCHNP++I +G SF L+K SGK+C M+ ++E +I WG++P YW W +PESRF ++AEL V WFEI+G+ ++LS T Y+AY+VFK D G P+E G+ G ++ +R+ + P+D + + E GWM ++GEFFNE Sbjct: 63 VLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSRVFASKKEL------YFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHLPVEVGLGLVGQESSKRFIYFIG-PRDRRGRRETRDVTKPDQREDGWMEAELGEFFNE 285
BLAST of FC932386 vs. ExPASy Swiss-Prot
Match: P2B10_ARATH (F-box protein PP2-B10 OS=Arabidopsis thaliana GN=PP2B10 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.229e-41 Identity = 89/223 (39.91%), Postives = 126/223 (56.50%), Query Frame = 2 Query: 38 PPECISRIISLSTARDACRSSIACPIFKSAADSDYVWEKFLPSDYEQXXXXXXXXXXXXXXXXXXXXYFHLCHNPIIINNGTMSFVLDKESGKKCFMVRAREFYIEWGNTPSYWIWSYLPESRFAEVAELKLVWWFEIKGRIETKILSLKTIYAAYLVFKFVDTRYGFERRPIEFGVHFEGSDTEER---YRVVLDLPKDMPQLSQEGEMGWMGDKMGEFFNE 697 P +CIS IIS + RDAC ++ F+S SD +WEKFLP+DYE YF LC++P++ ++ S L+K SGK+C M+ A I WG+ P YW W +PESRF +VA+L+ V WFEI+GR T++LS +T Y+AY+VFK VD YGF+ IE V G + R + + + ++ E GWM ++GEFFN+ Sbjct: 18 PEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPSRVFSSKKEL------YFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFKGVDKCYGFQNVAIEAAVGVVGQEPSRRLICFSEAIRRGRRNVVKPKQREDGWMEIELGEFFND 234
BLAST of FC932386 vs. ExPASy Swiss-Prot
Match: P2B12_ARATH (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana GN=PP2B12 PE=4 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.961e-39 Identity = 88/220 (40.00%), Postives = 127/220 (57.73%), Query Frame = 2 Query: 35 LPPECISRIISLSTARDACRSSIACPIFKSAADSDYVWEKFLPSDYEQXXXXXXXXXXXXXXXXXXXXYFHLCHNPIIINNGTMSFVLDKESGKKCFMVRAREFYIEWGNTPSYWIWSYLPESRFAEVAELKLVWWFEIKGRIETKILSLKTIYAAYLVFKFVDT-RYGFERRPIEFGVHFEGSDTEERYRVVLDLPKDMPQLSQEGEMGWMGDKMGEFF 691 LP ECI+ +IS ++ DACR S + +SAADS+ WE+FLPSDY + C +P++I +G SF ++K SGKKC+M+ AR+ I W ++P +WIW +P+SRF EVA L +V WFEI+G+I T +LS T Y+AYLVFK + +GFE P+E ++ RV L K Q S+E GW+ ++GE++ Sbjct: 6 LPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYIDNSLSRFSNKQL------FLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWVSIPDSRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFKEQEMGSFGFESLPLEVSFRSTRTEVYNNRRVFL---KSGTQESRED--GWLEIELGEYY 214
BLAST of FC932386 vs. ExPASy Swiss-Prot
Match: P2B11_ARATH (F-box protein PP2-B11 OS=Arabidopsis thaliana GN=PP2B11 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.961e-39 Identity = 93/227 (40.97%), Postives = 128/227 (56.39%), Query Frame = 2 Query: 35 LPPECISRIISLSTARDACRSSIACPIFKSAADSDYVWEKFLPSDYEQXXXXXXXXXXXXXXXXXXXXYFHLCHNPIIINNGTMSFVLDKESGKKCFMVRAREFYIEWGNTPSYWIWSYLPESRFAEVAELKLVWWFEIKGRIETKILSLKTIYAAYLVFKFVDTRYGFERRPIEFGVHFEGSDTEERYRVVLDLPKDMPQLS--QEGEM------GWMGDKMGEFF 691 LP +CI++I+SL+T D CR S IF+SAA SD VW FLP+D+ +F L NP++IN +SF L+++SG KC+M+ AR I WG+ YW W LP +RF EVAEL +VWW EI G+I +LS T+YAAY VFK+ + YGF R+P+E + +DTE VV + Q S +EG+ GW ++G+FF Sbjct: 4 LPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADFPAGFAAPAGLPTRKQL------FFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWISLPNTRFGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSPYGF-RQPVETSLVL--ADTESTDNVVQPSMISLMQDSGGEEGQSPVLRRDGWYEVELGQFF 221
BLAST of FC932386 vs. ExPASy Swiss-Prot
Match: PP2B2_ARATH (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana GN=PP2B2 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.346e-39 Identity = 89/230 (38.70%), Postives = 130/230 (56.52%), Query Frame = 2 Query: 35 LPPECISRIISLSTARDACRSSIACPIFKSAADSDYVWEKFLPSDYEQXXXXXXXXXXXXXXXXXXXXYFHLCHNPIIINNGTMSFVLDKESGKKCFMVRARE-FYIEWGNTPSYWIWSYLPESRFAEVAELKLVWWFEIKGRIETKILSLKTIYAAYLVFKFVDTRYGFERRPIEFGVHFEGSDTEERYRVVLDLPKDMPQLSQEGEM--------GWMGDKMGEFFNE 697 LP +CIS IIS ++ RDAC ++ F+SA +SD VW+KFLPSDY YF +C NP+++ +G SF L+KE+GKKCFM+ ++ +I W +TP YW W +PE+RF EV EL V WFE++G + TK LS T Y+AY+VFK + P+E V G ++ +R+ + P D + + ++ GWM ++G+FFNE Sbjct: 45 LPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLVPPSRVFSSKKEL------YFAICDNPVLVEDGGKSFWLEKENGKKCFMLSPKKSMWITWVSTPQYWRWISIPEARFEEVPELLNVCWFEVRGGMNTKELSPGTRYSAYIVFKTKNGCPNLGDVPVEATVGLVGQESSQRH-IYFVGPSDQRRDRETRDVTRPTKRKDGWMEAELGQFFNE 267
BLAST of FC932386 vs. ExPASy Swiss-Prot
Match: PP2B6_ARATH (Putative F-box protein PP2-B6 OS=Arabidopsis thaliana GN=PP2B6 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.076e-37 Identity = 86/228 (37.72%), Postives = 123/228 (53.95%), Query Frame = 2 Query: 35 LPPECISRIISLSTARDACRSSIACPIFKSAADSDYVWEKFLPSDYEQXXXXXXXXXXXXXXXXXXXXYFHLCHNPIIINNGTMSFVLDKESGKKCFMVRAREFYIEWGNTPSYWIWSYLPESRFAEVAELKLVWWFEIKGRIETKILSLKTIYAAYLVFKFVDTRYGFERRPIEFGVHFEGSDT-------EERYRVVLDLPKDMPQLSQEGEMGWMGDKMGEFFNE 697 LP +CIS IIS ++ RD C S+ F A D +WEKFLPS+YE YF LC++P+++ +G SF L+ SGKKC ++ A+E +I GN P YW W L ES F +V EL F++ G + T+ILSL T Y+ Y+V+K D R+G PI+ GV F+G + +E + PK S++ GWM ++G+FFN+ Sbjct: 48 LPEDCISNIISFTSPRDVCVSASVSKSFAHAVQCDSIWEKFLPSEYESLIPPWRVFSSKKDL------YFTLCYDPVLVEDGKKSFWLETASGKKCVLLAAKELWITGGNNPEYWQWIELCESSFEKVPELLNNRSFQMGGSMSTQILSLGTHYSVYIVYKIKDERHGLRDLPIQVGVGFKGQEMPKQFICFDESTDKTKEWPKKKLMKSKKRGDGWMEAEIGDFFND 269
BLAST of FC932386 vs. ExPASy Swiss-Prot
Match: PP2B8_ARATH (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana GN=PP2B8 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.090e-37 Identity = 86/233 (36.91%), Postives = 123/233 (52.79%), Query Frame = 2 Query: 35 LPPECISRIISLSTARDACRSSIACPIFKSAADSDYVWEKFLPSDYEQXXXXXXXXXXXXXXXXXXXXYFHLCHNPIIINNGTMSFVLDKESGKKCFMVRAREFYIEWGNTPSYWIWSYLPESRFAEVAELKLVWWFEIKGRIETKILSLKTIYAAYLVFKFVDTRYGFERRPIEFGVHFEGSDTEERYRVVLDLPKDMPQLSQEGEM------------GWMGDKMGEFFNE 697 LP EC+S I+S ++ +DAC + F SA SD VWEKF+P +YE YF LC ++I++G S ++K + K+C M+ A I WGN+P W W P++RF VAEL V FEI+GRI ++++S KT Y+AY+V+K ++ YGFE +E V G D EE R + + M + + + GWM K+GEFFNE Sbjct: 39 LPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRAFKFLSKKEL----YFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWRWIPDPQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYKKLNICYGFENVAVEVVVGVVGQDLEESCRRYICFDETMDEQFRRRDRGKNLVKPERRKDGWMEIKIGEFFNE 267
BLAST of FC932386 vs. ExPASy Swiss-Prot
Match: PP2B1_ARATH (F-box protein PP2-B1 OS=Arabidopsis thaliana GN=PP2B1 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.190e-36 Identity = 79/183 (43.17%), Postives = 110/183 (60.11%), Query Frame = 2 Query: 35 LPPECISRIISLSTARDACRSSIACPIFKSAADSDYVWEKFLPSDYEQXXXXXXXXXXXXXXXXXXXXYFHLCHNPIIINNGTMSFVLDKESGKKCFMVRAREFYIEWGNTPSYWIWSYLPESRFAEVAELKLVWWFEIKGRIETKILSLKTIYAAYLVFKFVDTR-YGFERRPIEFGVHFEG 580 LP +CIS++IS ++ RDAC + KSAA SD VWE FLPS+Y + L N +++ NG SF ++K SGKKC+M+ A E I WG++P+YW W +PES+F +VAEL+ V WFE++G+I +LS T Y+ Y+VFK + R YGF+ P+E GV F G Sbjct: 35 LPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQSANHLSKKEI------FLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWITVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLVPVEAGVGFVG 211
BLAST of FC932386 vs. ExPASy Swiss-Prot
Match: SKIP3_ARATH (F-box protein SKIP3 OS=Arabidopsis thaliana GN=SKIP3 PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.961e-32 Identity = 86/235 (36.60%), Postives = 121/235 (51.49%), Query Frame = 2 Query: 35 LPPECISRIISLSTARDACRSSIACPIFKSAADSDYVWEKFLPSDYEQXXXXXXXXXXXXXXXXXXXXYFHLCHNPIIINNGTMSFVLDKESGKKCFMVRAREFYI-EWGNTPSYWIWSYLPESRFAEVAELKLVWWFEIKGRIETKILSLKTIYAAYLVFKFVDTRYGFERRPIEFGVHFEGSDT-------------EERYRVVLDLPKDMPQLSQEGEMGWMGDKMGEFFNE 697 LP CIS IIS ++ DAC ++ IF+SA SD VWEKFLP+DYE YF LC++P++I +G MS L+K SGK+C M+ A + + ++W PESRF VA L+ + FE R+ T++LSL+T Y+ Y+VFK D GF+ IE V G ++ + R R V+ P + E GWM ++GEF+NE Sbjct: 27 LPEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFLPTDYES------LITPSRVFSSKKELYFSLCNDPLLIEDGKMSLWLEKASGKRCIMLSATAMNLSSMADMSQRFLWIPCPESRFETVAALREAYRFEFNCRMNTRVLSLRTRYSVYIVFKKADNWCGFKGVSIEAVVGIVGEESFRSFICFDTHGKGQARKRKVVAKP-------ELREDGWMETEIGEFYNE 248
BLAST of FC932386 vs. ExPASy Swiss-Prot
Match: PP2B5_ARATH (F-box protein PP2-B5 OS=Arabidopsis thaliana GN=PP2B5 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.132e-29 Identity = 84/223 (37.67%), Postives = 118/223 (52.91%), Query Frame = 2 Query: 35 LPPECISRIISL-STARDACRSSIACPIFKSAADSDYVWEKFLPS-DYEQXXXXXXXXXXXXXXXXXXXXYFHLCHNPIIINNGTMSFVLDKESGKKCFMVRAREFYIEWGNTPSYWIWSYLPESRFAEVAELKLVWWFEIKGRIETKILSLKTIYAAYLVFKFVDTRYGFERRPIEFGVHFEGSDTEERYRVVLDLPKDMPQLSQEGEMGWMGDKMGEFFNE 697 LP +C++ I S ST RDA +++ F +SD VWEKFLP DY YF LC +P +NG MSF LDK SGKKC M+ A++ I P YW W +PESRF EV EL + F+I+G + T+I+S T Y+AY+V+ GF+ PI+ GV F+ + + + D S++ + GWM K+G+F+NE Sbjct: 37 LPDDCLAIISSFTSTPRDAFLAALVSKSFGLQFNSDSVWEKFLPPPDYVSLLPKSRVFSSKKEL------YFALC-DPFPNHNGKMSFRLDKASGKKCVMLSAKKLLISRVVNPKYWKWISIPESRFDEVPELLNIDSFDIRGVLNTRIISPGTHYSAYIVYTKTSHFNGFQTSPIQAGVGFQRHGMSKTF-IRFD--------SKKRQDGWMEAKIGDFYNE 243 The following BLAST results are available for this feature:
BLAST of FC932386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932386 ID=FC932386; Name=FC932386; organism=Citrus clementina; type=EST; length=707bpback to top |