FC932422
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932422 vs. ExPASy Swiss-Prot
Match: CML49_ARATH (Probable calcium-binding protein CML49 OS=Arabidopsis thaliana GN=CML49 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 8.136e-48 Identity = 97/180 (53.89%), Postives = 113/180 (62.78%), Query Frame = 3 Query: 141 HGGPPSSQPYSAQYGAPPTAHPYSAQYGAPPTAQPYGARPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPFASLMPSTFPPGTDPNIVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSK*VREAL 680 +GG P + YG P + YGAPP YG+ PFASL+PS FPPGTDPNIVACFQ ADRDNSG IDDKELQGALSSYNQSFS+RTV LLMY FTN+N RKIGPKEF +F SLQNWR++FE+ D+DRSG+ID+ +R+AL Sbjct: 114 YGGAPQQSGHGGGYGGAPQQSGHGGGYGAPPPQASYGS----------------------------------PFASLVPSAFPPGTDPNIVACFQAADRDNSGFIDDKELQGALSSYNQSFSIRTVHLLMYLFTNSNVRKIGPKEFTSLFFSLQNWRSIFERFDKDRSGRIDTNELRDAL 259
BLAST of FC932422 vs. ExPASy Swiss-Prot
Match: CML50_ARATH (Probable calcium-binding protein CML50 OS=Arabidopsis thaliana GN=CML50 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.436e-44 Identity = 102/212 (48.11%), Postives = 120/212 (56.60%), Query Frame = 3 Query: 132 TSHHGGPPSSQPYS---AQYGAPPTAHPYSAQYGAPPTA---------------QP------YGARP-----HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPFASLMPSTFPPGTDPNIVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSK*VREAL 680 +S +G PP S PY+ Y PP PY YGAPP + QP YGA P +PFASL+PS F PGTDPNIVACFQ AD+D SG IDDKELQGALSSY Q FS+RTV LLMY FTN+NA KIGPKEF +F+SLQNWR++FE+ D+DRSG+ID +R+AL Sbjct: 67 SSSYGAPPPSAPYAPSPGDYNKPPKEKPYGGGYGAPPPSGSSDYGSYGAGPRPSQPSGHGGGYGATPPHGVSDYGSYGGAPPRPASSGHGGGYGGYPPQASYGSPFASLIPSGFAPGTDPNIVACFQAADQDGSGFIDDKELQGALSSYQQRFSMRTVHLLMYLFTNSNAMKIGPKEFTALFYSLQNWRSIFERSDKDRSGRIDVNELRDAL 278
BLAST of FC932422 vs. ExPASy Swiss-Prot
Match: PEF1_DANRE (Peflin OS=Danio rerio GN=pef1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.814e-16 Identity = 57/190 (30.00%), Postives = 82/190 (43.16%), Query Frame = 3 Query: 123 QGYTSHHGGPPS-SQPYSAQYGAPPTAHPYSAQYGAPPTAQPYGA-RPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPFASL-MPSTFPPGTDPNIVACFQLADRDNSGLIDDKELQGALSSYNQS-FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSK*VREAL 680 QGY+ G P QP A Y P A Y + YG+ P Q YG P+ P+ PPG +P F D D SG I+ KEL+ AL ++N S F+ T +++ F T + ++ F ++ LQ WRA F++ DRDRSG I++ + +AL Sbjct: 7 QGYSGPGGNAPQWQQPPRAPYAGGPAAGQYGSPYGSAPPGQQYGGGSPYGSYGQPGPRAPYGGGQAPGGPYGGYGQPQGGPYRQQGSAGNVPPGVNPEAYQWFSTVDSDQSGYINAKELKQALMNFNNSSFNDETCIMMLNMFDKTKSGRVDVFGFSALWTFLQQWRAAFQQFDRDRSGSINTNEMHQAL 196
BLAST of FC932422 vs. ExPASy Swiss-Prot
Match: CML48_ARATH (Probable calcium-binding protein CML48 OS=Arabidopsis thaliana GN=CML48 PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.072e-15 Identity = 44/101 (43.56%), Postives = 67/101 (66.34%), Query Frame = 3 Query: 384 FPPGTDPNIVACFQLADRDNSGLIDDKELQGALS-SYNQSFSLRTVRLLM--YTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSK*VREA 677 F P T P IV F+ ADR+ SG +++ EL+ ALS S S RT+RLL+ Y + ++GPKE++++++ L WRA+F + DRDRSGK++S +R+A Sbjct: 49 FSPETHPEIVRSFESADRNRSGFLEESELRQALSLSGYDGISNRTIRLLLFIYKIPVDSLLRLGPKEYVELWNCLAQWRAIFNRYDRDRSGKMNSTQLRDA 149
BLAST of FC932422 vs. ExPASy Swiss-Prot
Match: PEF1_XENLA (Peflin OS=Xenopus laevis GN=pef1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.814e-13 Identity = 58/203 (28.57%), Postives = 85/203 (41.87%), Query Frame = 3 Query: 123 QGYTSHHGGPPSSQPYSAQYGAPPTAHPY--SAQYGAPPTAQPYGARPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN-----PFASLMPSTF---------PPGTDPNIVACFQLADRDNSGLIDDKELQGALSSYN-QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSK*VREAL 680 QGY G PP + P + YG +A YG P PYG+ P + P+ S ++ PPG DP + FQ D D+SG I KEL+ AL + N SF+ T ++M F +N+ +I F ++ +Q WR +F++ DRDRSG I+ + +AL Sbjct: 8 QGYHGAAGQPPGA-PQTNYYGGQQYGGGVQPAASYGRPAPGAPYGSPPSGGVYGHPVPGSAAPGAPGGPYGGQAPGGPYSVPGSTPYGSQQHGSYGQGAPAGNIPPGVDPEAFSWFQTVDTDHSGYISLKELKQALVNTNWSSFNDETCTMMMNMFDKSNSGRIDMFGFSALWRFIQQWRNLFQQYDRDRSGSINQGELHQAL 209
BLAST of FC932422 vs. ExPASy Swiss-Prot
Match: PEF1_MOUSE (Peflin OS=Mus musculus GN=Pef1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.507e-13 Identity = 59/186 (31.72%), Postives = 78/186 (41.94%), Query Frame = 3 Query: 126 GYTSHHGGPPSSQPYSAQYGAPPTAHPYSAQYGAPPTAQPYGARPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPFASLMPSTFPPGTDPNIVACFQLADRDNSGLIDDKELQGALSSYN-QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSK*VREAL 680 GY S GG PS P S YG P PY G P PYG +P PP DP + FQ D D+SG I KEL+ AL + N SF+ T +++ F T + +I F ++ LQ WR +F++ DRDRSG I S +++AL Sbjct: 56 GYPSA-GGVPSGTP-SGPYGGIPPGGPY----GQLPPGGPYGTQPGHYGQGGV----------------------------------PPNVDPEAYSWFQSVDADHSGYISLKELKQALVNSNWSSFNDETCLMMINMFDKTKSGRIDVAGFSALWKFLQQWRNLFQQYDRDRSGSISSTELQQAL 201
BLAST of FC932422 vs. ExPASy Swiss-Prot
Match: PEF1_RAT (Peflin OS=Rattus norvegicus GN=Pef1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.472e-12 Identity = 58/192 (30.21%), Postives = 80/192 (41.67%), Query Frame = 3 Query: 126 GYTSHHGGPPSSQPYSAQYGAPPTAHPYSAQYGAPPTAQPYG-ARPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPFASLMPSTF-----PPGTDPNIVACFQLADRDNSGLIDDKELQGALSSYN-QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSK*VREAL 680 GY S GG PS P G PP YG P PYG A P +P+ + P + PP DP + FQ D D+SG I KEL+ AL + N SF+ T +++ F T +I F ++ LQ W+ +F++ DRD SG I S +++AL Sbjct: 55 GYPSA-GGTPSGTPGGPYGGGPP-----GGPYGGGPPGGPYGQAHP-------------------------------SPYGTQPPGPYGQGGVPPNVDPEAYSWFQSVDADHSGYISLKELKQALVNSNWSSFNDETCLMMINMFDKTKTGRIDVVGFSALWKFLQQWKNLFQQYDRDHSGSISSTELQQAL 209 The following BLAST results are available for this feature:
BLAST of FC932422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932422 ID=FC932422; Name=FC932422; organism=Citrus clementina; type=EST; length=682bpback to top |