FC932424
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932424 vs. ExPASy Swiss-Prot
Match: ZN363_HUMAN (RING finger and CHY zinc finger domain-containing protein 1 OS=Homo sapiens GN=RCHY1 PE=1 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.124e-43 Identity = 80/179 (44.69%), Postives = 101/179 (56.42%), Query Frame = 1 Query: 7 CGVCMGEYFCESCKLFDDDTSKKQYHXXXXXXXXXXXXXNFFHCNKCRCCYSMLLKNSHPCVEGAMHHDCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREHHQYACPICSKSVCDMSKVWEKYDREIAATPMPEAYLNKKVWILCNDCGKTSNVQFHVLAQKCPNCKSYNTRLTRG 543 C GEY+C+ C LFD D KKQYH +FFHC KC C +M L+ H C+E +CP+C E + +R VLPCGH +H+ C +EM + Y CP+C S DM++ W + D E+A TPMP Y N V ILCNDC S VQFH+L KC C+SYNT G Sbjct: 78 CSTLFGEYYCDICHLFDKD--KKQYHCENCGICRIGPKEDFFHCLKCNLCLAMNLQGRHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG-YRCPLCMHSALDMTRYWRQLDDEVAQTPMPSEYQNMTVDILCNDCNGRSTVQFHILGMKCKICESYNTAQAGG 253
BLAST of FC932424 vs. ExPASy Swiss-Prot
Match: ZN363_MOUSE (RING finger and CHY zinc finger domain-containing protein 1 OS=Mus musculus GN=Rchy1 PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.623e-42 Identity = 78/180 (43.33%), Postives = 99/180 (55.00%), Query Frame = 1 Query: 4 NCGVCMGEYFCESCKLFDDDTSKKQYHXXXXXXXXXXXXXNFFHCNKCRCCYSMLLKNSHPCVEGAMHHDCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREHHQYACPICSKSVCDMSKVWEKYDREIAATPMPEAYLNKKVWILCNDCGKTSNVQFHVLAQKCPNCKSYNTRLTRG 543 +C GEY+C C LFD D K+QYH +FFHC KC C + L+ H C+E +CP+C E + +R VLPCGH +H+ C +EM + Y CP+C S DM++ W + D E+A TPMP Y N V ILCNDC S VQFH+L KC C SYNT G Sbjct: 77 DCSTLFGEYYCSICHLFDKD--KRQYHCESCGICRIGPKEDFFHCLKCNLCLTTNLRGKHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG-YRCPLCMHSALDMTRYWRQLDTEVAQTPMPSEYQNVTVDILCNDCNGRSTVQFHILGMKCKLCDSYNTAQAGG 253
BLAST of FC932424 vs. ExPASy Swiss-Prot
Match: YERG_SCHPO (Uncharacterized RING finger protein C2F3.16 OS=Schizosaccharomyces pombe GN=SPAC2F3.16 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.624e-34 Identity = 65/176 (36.93%), Postives = 95/176 (53.98%), Query Frame = 1 Query: 7 CGVCMGEYFCESCKLFDDDTSKKQYHXXXXXXXXXXXXX--NFFHCNKCRCCYSMLLKNSHPCVEGAMHHDCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREHHQYACPICSKSVCDMSKVWEKYDREIAATPMPEAYLNKKVWILCNDCGKTSNVQFHVLAQKCPNCKSYNT 528 C CMG Y+C CKL+DDD +K YH ++FHC C C + + N+H C+E + +CP+C EY+F +R+ VI L C H +H+ C +E + Y CP C K++ +++ ++ D EI PMP Y I CNDC + ++H L KC +C SYNT Sbjct: 200 CKNCMGRYYCNKCKLWDDDPNKSSYHCDDCGICRIGRGLGDDYFHCKTCGLCLPISVFNTHRCIERSTDCNCPICGEYMFNSRERVIFLSCSHPLHQRCHEEYIRTN-YRCPTCYKTIINVNSLFRILDMEIERQPMPYPYNTWISTIRCNDCNSRCDTKYHFLGHKCNSCHSYNT 374 The following BLAST results are available for this feature:
BLAST of FC932424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932424 ID=FC932424; Name=FC932424; organism=Citrus clementina; type=EST; length=755bpback to top |