FC932439

Overview
NameFC932439
Unique NameFC932439
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig730 contig Ccv1_Contig730:200..879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.429e-60
Identity = 115/228 (50.44%), Postives = 160/228 (70.18%), Query Frame = 3
Query:    3 IFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTE---SKDMLGALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSF 677
            +FS+DL    SK + EF+ T  G ME AGKP+ +++FP +  LDLQG R+ M     ++  VF   +D ++ ++   ++++   ++D L +LL + E    E+D NDI+HL L +F AGTDT+SSTLEWAM ELLRNP  + K + E+++ +G+ + ++ESDI+ LPYLQAV+KETFRLHPA PLL+PRKA +D EV GFMVP   QVLVN WAIGRD S+W+NP  F
Sbjct:  194 LFSVDLGSYDSKKSNEFQDTVIGAMEAAGKPDAANYFPFMGFLDLQGNRKAMRGLTERLFRVFRGFMDAKIAEKSLGNYSKDVSNRDFLDSLLILNEGDEAELDNNDIEHLLLDMFTAGTDTSSSTLEWAMAELLRNPKTMVKAQAEMDRVLGQNSVVQESDISGLPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVLVNVWAIGRDPSVWENPSQF 421          
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.932e-57
Identity = 116/230 (50.43%), Postives = 152/230 (66.09%), Query Frame = 3
Query:    3 IFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDM-----LGALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSF 677
            +FS+DL +  S  +  F+ T  G+ME  G P+ ++FFP L  LDLQG R+ +     ++  VF   ID +L ++  RD T SKD+     +  LL + E    E++ NDI HL L LF AGTDT SST+EWAM ELLRNP+ + K + E++  IG+   +EESDI+ LPYLQAV+KETFRLHPA PLL+PRKA +D EV GFMVP   QV VN WAIGRD ++W+N   F
Sbjct:  194 LFSVDLGNYDSNKSGVFQDTVIGVMEAVGNPDAANFFPFLGFLDLQGNRKTLKACSERLFKVFRGFIDAKLAEKSLRD-TNSKDVRERDFVDVLLDLTEGDEAELNTNDIVHLLLDLFGAGTDTNSSTVEWAMAELLRNPETMVKAQAEIDCVIGQKGVVEESDISALPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVFVNVWAIGRDPNVWENSSRF 422          
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.523e-57
Identity = 110/225 (48.89%), Postives = 151/225 (67.11%), Query Frame = 3
Query:    3 IFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLGALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSF 677
            IFS DL DP   + +EF++    +M ++ K NL D FPVL+ +D QGI+R M  +F K+L +FD+LI++R++  +     E  D+L   LK+ +D   E +  +IK LFL LF AGTDTTS T+EWAMTELLR P I+SK + ELE+ IGKG+ ++E D+ RLPYL  ++KE  RLHP  PLLLPRK     E++G+ +P G  V VN WAIGRD ++WD+   F
Sbjct:  183 IFSKDLTDPYEDSGKEFREVITNIMVDSAKTNLVDVFPVLKKIDPQGIKRGMARHFSKVLGIFDQLIEERMRTGR----FEQGDVLDVCLKMMQDNPNEFNHTNIKALFLDLFVAGTDTTSITIEWAMTELLRKPHIMSKAKEELEKVIGKGSIVKEDDVLRLPYLSCIVKEVLRLHPPSPLLLPRKVVTQVELSGYTIPAGTLVFVNAWAIGRDPTVWDDSLEF 403          
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 6.871e-55
Identity = 110/231 (47.62%), Postives = 151/231 (65.37%), Query Frame = 3
Query:    3 IFSIDLADPTSKTAR-EFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESK-----DMLGALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSF 677
            +FS+DLA   S ++  EF  T   + + AG PN+ D+F  +  LDLQG R++  +   K+  VF   ID RL +R  R   E K     DML +LL + +    E+ +ND+KHL L +F AGTDT SST+EWAMTEL R+ + + K + E+ Q IG+   ++ESDI  LPYLQA++KET RLHPA P L+PRK+ +D ++ GF+VP   QV+VN WAIGRDAS+W+NP  F
Sbjct:  193 LFSVDLATYDSNSSSYEFHNTVVHLTDIAGIPNVGDYFQYMRFLDLQGTRKKAVLCIEKLFRVFQEFIDARLAKRFSRTEKEPKEASSIDMLDSLLDLTQQNEAELTMNDLKHLLLDVFVAGTDTNSSTMEWAMTELFRSTEKMVKAQSEIRQVIGQNGFVQESDIPSLPYLQAIVKETLRLHPAAP-LIPRKSESDVQIMGFLVPKNTQVVVNVWAIGRDASVWENPMKF 422          
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.531e-54
Identity = 110/230 (47.83%), Postives = 154/230 (66.96%), Query Frame = 3
Query:    3 IFSIDLA-DPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTES-KDMLGALLKI---CEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSF 677
            IFS DL  DP SK   EF     G+ME AG PN+SD FP L+  D+QG+R++M    GK  ++  + I++R+++R++ +   S KD+L  L+      +D+  ++  ++I  + L +F AGT+TTSS++EWA+TELLR+P  ++KV+LE+ Q IG     EE DI  LPY+QAVLKE  RLHP +PLL+PRKA  DT+  G+ +P G QVLVN WAIGRD   WDNP+ F
Sbjct:  152 IFSKDLVTDPESKQGSEFFNAMIGIMEWAGVPNISDIFPCLKMFDVQGLRKKMERDMGKGKEITKKFIEERIEERKKGEKNRSIKDLLDVLIDFEGSGKDEPDKLSEDEITVIILEMFLAGTETTSSSVEWALTELLRHPQAMAKVKLEILQVIGPNKKFEECDIDSLPYMQAVLKEQLRLHPPLPLLIPRKAIQDTKFMGYDIPKGTQVLVNAWAIGRDPEYWDNPFEF 381          
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.097e-52
Identity = 109/229 (47.60%), Postives = 153/229 (66.81%), Query Frame = 3
Query:    3 IFSIDLADPTSKTA-REFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTES---KDMLGALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSF 677
            +FS+DL    +K +    + T   +M+ AG P+ +++FP L  LDLQG  +   V   +++ VF   ID ++ ++  ++  +     D +  LL    D+S E+ I+DI+HL L +F AGTDT+SSTLEWAMTELL+NP  ++K + E++  IG+   +EESDI++LPYLQAV+KETFRLH  VPLL+PRKA +D E+ GFMV    QVLVN WAIGRD S+WDNP  F
Sbjct:  194 LFSVDLGSYNAKASINGVQDTVISVMDAAGTPDAANYFPFLRFLDLQGNVKTFKVCTERLVRVFRGFIDAKIAEKSSQNNPKDVSKNDFVDNLLDYKGDES-ELSISDIEHLLLDMFTAGTDTSSSTLEWAMTELLKNPKTMAKAQAEIDCVIGQNGIVEESDISKLPYLQAVVKETFRLHTPVPLLIPRKAESDAEILGFMVLKDTQVLVNVWAIGRDPSVWDNPSQF 421          
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.229e-48
Identity = 100/228 (43.86%), Postives = 145/228 (63.60%), Query Frame = 3
Query:    3 IFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLGALLKIC---EDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSF 677
            I S DLAD  S+ A EF      + E +G  N+SD FP L+  DLQ +R++M    GK +++    + +R ++R+ +   + KD L  LL+     +D+  ++  ++IK   L +F AGT+TTSS++EWA+TELLR+P+ ++KV+ E+ Q I      E+SDI  LPY+QAVLKE+ RLHP +P L+PR+   DT+  G+ VP   QVLVN WAIGRD   WD+P SF
Sbjct:  193 ILSKDLADLESEEASEFFIAMKRINEWSGIANVSDIFPFLKKFDLQSLRKKMARDMGKAVEIMSMFLKEREEERK-KGTEKGKDFLDVLLEFQGTGKDEPAKLSEHEIKIFVLEMFLAGTETTSSSVEWALTELLRHPEAMAKVKTEISQAIEPNRKFEDSDIENLPYMQAVLKESLRLHPPLPFLIPRETIQDTKFMGYDVPKDTQVLVNAWAIGRDPECWDDPMSF 419          
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.708e-43
Identity = 95/210 (45.24%), Postives = 130/210 (61.90%), Query Frame = 3
Query:   78 EEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFT--------ESKDMLGALLKICEDKSVEIDIN--DIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSF 677
            E +GK N+SDF   L+  DLQG  +R+     K+ D FD ++D+ +KQR+E            E KDML  L  I ED+S EI +N  +IK   L +  AGTDT++ T+EWAM EL+ NP +L K R E++  +GK   +EESDI  LPYLQ +++ET RLHPA PLL  R++S    V G+ +P   ++ VN WAIGRD + W+NP  F
Sbjct:  212 ELSGKFNISDFVSFLKRFDLQGFNKRLE----KIRDCFDTVLDRIIKQREEERRNKNETVGKREFKDMLDVLFDISEDESSEIKLNKENIKAFILDILIAGTDTSAVTMEWAMAELINNPGVLEKARQEMDAVVGKSRIVEESDIANLPYLQGIVRETLRLHPAGPLLF-RESSRRAVVCGYDIPAKTRLFVNVWAIGRDPNHWENPLEF 416          
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.344e-42
Identity = 92/226 (40.71%), Postives = 137/226 (60.62%), Query Frame = 3
Query:   12 IDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQE--RDFTESKDMLGALLKICEDKSVEIDIN--DIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSF 677
            +D +   S +  EF+     +M  AG  N+ DF P +  +DLQGI+R M V   K    FD L+++ +K+  E   D  ++ D L  L+   ++ +  I +N  ++K L L LF AGTDT+SS +EWA+ E+L +  IL++   E++Q IG+   +E+SDI  LPY QA+ KETFR HP+ PL LPR ++   EV GF +P   +++VN WAIGRD  +W+NP  F
Sbjct:  207 LDSSASASASVSEFQYMVMELMRMAGLFNIGDFIPYIAWMDLQGIQRDMKVIQKK----FDVLLNKMIKEHTESAHDRKDNPDFLDILMAATQENTEGIQLNLVNVKALLLDLFTAGTDTSSSVIEWALAEMLNHRQILNRAHEEMDQVIGRNRRLEQSDIPNLPYFQAICKETFRKHPSTPLNLPRISTEACEVDGFHIPKNTRLIVNIWAIGRDPKVWENPLDF 428          
BLAST of FC932439 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.293e-42
Identity = 90/216 (41.67%), Postives = 134/216 (62.04%), Query Frame = 3
Query:   42 AREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLGALLKICEDKSV----EIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLLPRKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSF 677
            A EFK     MM  AG  N+ DF P L  LD+QG+  +M     K+   FD  +   L++ + + F E KD+L  L+ +  D +     ++   +IK L L LF AGTDT+SST+EWA+ EL+RNP IL++ + E+++ +G+   + E D+ +L YL+A++KETFRLHP+ PL LPR AS   E+ G+ +P G+ +L+N WAI RD + W +P  F
Sbjct:  203 AAEFKSMVVEMMVVAGVFNIGDFIPQLNWLDIQGVAAKMK----KLHARFDAFLTDILEEHKGKIFGEMKDLLSTLISLKNDDADNDGGKLTDTEIKALLLNLFVAGTDTSSSTVEWAIAELIRNPKILAQAQQEIDKVVGRDRLVGELDLAQLTYLEAIVKETFRLHPSTPLSLPRIASESCEINGYFIPKGSTLLLNVWAIARDPNAWADPLEF 414          
The following BLAST results are available for this feature:
BLAST of FC932439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 474
Match NameE-valueIdentityDescription
C76C4_ARATH1.429e-6050.44Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C2_ARATH1.932e-5750.43Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76B1_HELTU2.523e-5748.897-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C76C3_ARATH6.871e-5547.62Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76A1_SOLME1.531e-5447.83Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C76C1_ARATH1.097e-5247.60Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C76A2_SOLME6.229e-4843.86Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C93A3_SOYBN2.708e-4345.24Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C75A6_CAMME1.344e-4240.71Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
F3PH_PETHY2.293e-4241.67Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC34208F03EF PostHarveN Citrus clementina cDNA clone C34208F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932439 ID=FC932439; Name=FC932439; organism=Citrus clementina; type=EST; length=680bp
CAATTTTTTCTATTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAG
TTTAAGCAAACAAATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTT
GTCCGATTTTTTTCCTGTGCTTGAGAATCTTGACTTGCAAGGTATAAGGC
GTCGCATGACAGTTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTG
ATTGATCAACGATTGAAGCAAAGACAAGAACGAGATTTCACCGAATCCAA
AGATATGTTAGGTGCTCTTCTCAAAATTTGTGAAGACAAAAGCGTGGAGA
TTGATATAAATGATATCAAACACTTGTTTCTGGTTTTGTTTGCTGCGGGG
ACTGATACTACTTCGAGTACATTGGAATGGGCAATGACAGAACTACTTCG
CAACCCAGATATTTTATCAAAAGTCCGATTAGAGTTAGAACAAACGATTG
GCAAAGGCAATCCAATTGAGGAATCAGACATCACCCGCTTACCTTATCTA
CAAGCAGTGCTCAAAGAAACCTTCAGGTTGCACCCGGCAGTTCCTCTTTT
ACTTCCCCGTAAAGCCTCAGCAGATACAGAAGTTGCTGGATTCATGGTGC
CAAATGGTGCACAAGTCTTAGTCAACACATGGGCTATAGGAAGAGATGCT
AGCTTATGGGACAACCCATACTCTTTTGTT
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