FC932442

Overview
NameFC932442
Unique NameFC932442
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15263 contig Ccv1_Contig15263:1..706. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.145e-55
Identity = 114/222 (51.35%), Postives = 151/222 (68.02%), Query Frame = 2
Query:   65 KQNNKYEEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVSSG-----ERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            K +   EEEE+   AM+LA   VLPM  ++AI+L + E+I K+G    +S  E+AAQL  QN  AP+MLDR+L LL S+ VL C++        ERLY L PV K+   N+DGVS+   + +  DKV MESW  L+DAV+EGGIPFN+ +GM  FEY   +P FN+ +++ M NHSTI M++ILE Y+GFQ ++ +VDVGGG G TL+MI SKYP IK INF
Sbjct:    9 KNSMTKEEEEACLSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPDAPVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSIKGINF 230          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.495e-55
Identity = 113/215 (52.56%), Postives = 150/215 (69.77%), Query Frame = 2
Query:   86 EEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            +EE+   AMQLA   VLPM  +AAI+L + EI+AKAG    LS  E+AAQL  QN +AP+MLDR+  LL S+ VL C++ +      ERLYGL PV K+ V N+DGVS+     +  DK+ MESW  L+DAV+EGGIPFN+ +GM  FEY   +P FN+ +++ M +HSTI M++ILE Y+GF+ +E +VDVGGG G  LSMI +KYP +K INF
Sbjct:   17 DEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPGEVAAQLPTQNPEAPVMLDRIFRLLASYSVLTCTLRNLPDGKVERLYGLAPVCKFLVKNEDGVSIAALNLMNQDKILMESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKIFNRGMSDHSTITMKKILETYKGFEGLETVVDVGGGTGAVLSMIVAKYPSMKGINF 231          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.680e-55
Identity = 111/215 (51.63%), Postives = 149/215 (69.30%), Query Frame = 2
Query:   86 EEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            EEE+   AM LA   VLPM  ++AI+L + E+IAKAG    +S  E+AAQL   N +AP+MLDR+L LL ++ VL+C +++      ERLYGL PV K+   N DGVS+   + +  DKV MESW  L+DAV++GGIPFN+ +GM  FEY   +P FN+ +++ M NHSTI M++ILE Y GF+ ++ +VDVGGG G TL+MI SKYP IK INF
Sbjct:    3 EEEACLFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPEAPIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTIKGINF 217          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.265e-54
Identity = 116/230 (50.43%), Postives = 155/230 (67.39%), Query Frame = 2
Query:   35 MRSLSEIQLPKQNNKYEEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGKLSAP-EIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVS--SG---ERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            M S +E QL     +  ++E+   AMQLA   VLPMA ++A++L + EI+AK G   +P EIA++L  +N +AP+MLDR+L LL S+ VL CS    SG   ER+YGL PV KY   N+DGVS+     +  DKV MESW  L+DA+++GGIPFN+ +GM  FEY   +P FN+ ++  M NHSTI M++ILE Y+GF+ +  LVDVGGG G TL MI SKYP +K INF
Sbjct:    1 MGSTAETQLTPV--QVTDDEAALFAMQLASASVLPMALKSALELDLLEIMAKNGSPMSPTEIASKLPTKNPEAPVMLDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKNEDGVSIAALCLMNQDKVLMESWYHLKDAILDGGIPFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNLKGINF 228          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.653e-54
Identity = 110/216 (50.93%), Postives = 148/216 (68.52%), Query Frame = 2
Query:   83 EEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            +EEE++  AMQLA   VLPM  ++AI+L + E+I KAG    +S  E+AAQL   N +A +MLDR+L LL S+ +LEC + +      +RLYGL PV K+   N+DGVS+     +  DKV MESW  L+DAV++GGIPFN+ +GM  FEY   +P FN+ +++ M NHSTI M++ILE Y GF  ++ +VDVGGG G TL+MI SKYP IK INF
Sbjct:   13 DEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSIKGINF 228          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.809e-54
Identity = 114/232 (49.14%), Postives = 151/232 (65.09%), Query Frame = 2
Query:   35 MRSLSEIQLPKQNNKYEEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            M S  E Q+     +  +EE++  AMQLA   VLPM  + AI+L + EI+AKAG    LS  EIA+ L  +N  AP+MLDR+L LL S+ +L CS+        ERLYGL PV K+   N+DGVS+     +  DKV MESW  L+DA++EGGIPFN+ +GM  FEY   +P FN+ ++K M +HSTI M++ILE Y+GF+ +  LVDVGGG G  ++ I SKYP IK INF
Sbjct:    1 MGSTGETQMTP--TQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINF 230          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 4.809e-54
Identity = 108/221 (48.87%), Postives = 150/221 (67.87%), Query Frame = 2
Query:   68 QNNKYEEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            QN    E+E++  AMQLA   VLPM  ++A++L + EI+AKAG    +S  E+AAQL  +N +AP+MLDRML LL ++ VL C++ +      ERLY L PV K    N DGVS+   + +  DKV MESW  L DAV++GG+PFN+ +GM  FEY   +P FN+ +++ M +HST+ M++ILE Y+GF+ +  +VDVGGG G T++MI SKYP IK INF
Sbjct:    6 QNLTQTEDEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINF 226          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.071e-53
Identity = 113/232 (48.71%), Postives = 151/232 (65.09%), Query Frame = 2
Query:   35 MRSLSEIQLPKQNNKYEEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            M S  E Q+     +  +EE++  AMQLA   VLPM  + AI+L + EI+AKAG    LS  EIA+ L  +N  AP+MLDR+L LL S+ +L CS+        ERLYGL PV K+   N+DGVS+     +  DKV MESW  L+DA+++GGIPFN+ +GM  FEY   +P FN+ ++K M +HSTI M++ILE Y+GF+ +  LVDVGGG G  ++ I SKYP IK INF
Sbjct:    1 MGSTGETQMTP--TQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINF 230          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.399e-53
Identity = 115/232 (49.57%), Postives = 153/232 (65.95%), Query Frame = 2
Query:   35 MRSLSEIQLPKQNNKYEEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAG---KLSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVSSGE-----RLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            M S  E Q+   +    +EE+   AMQLA   VLPM  ++A++L + EIIAKAG   ++S  EIA+QL   N  AP+MLDRML LL  + +L CSV + +     RLYGL  V+KY V N+DGVS+     +  DKV MESW  L+DAV++GGIPFN+ +GM  FEY   +P FN+ ++K M +HSTI M++ILE Y GF+ ++ LVDVGGG G  ++ I SKYP IK INF
Sbjct:    1 MGSTGETQITPTH--ISDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINF 230          
BLAST of FC932442 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.387e-53
Identity = 109/216 (50.46%), Postives = 146/216 (67.59%), Query Frame = 2
Query:   83 EEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLWLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAINF 706
            +EEE++  AMQLA   VLPM  ++AI+L + E+I K+G    +S  ++AAQL   N  A +MLDR+L LL S+ +LEC + +      ERLYGL PV K+   N+DGVS+     +  DKV MESW  L DAV++GGIPFN+ +GM  FEY   +P FN+ +++ M NHSTI M++ILE Y GF  ++ +VDVGGG G TL+MI SKYP IK INF
Sbjct:   13 DEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTTNPDAHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSIKGINF 228          
The following BLAST results are available for this feature:
BLAST of FC932442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT1_CATRO1.145e-5551.35Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_EUCGU1.495e-5552.56Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_COFCA5.680e-5551.63Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
OMT1_ARATH1.265e-5450.43Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT2_OCIBA1.653e-5450.93Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_POPKI4.809e-5449.14Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_CAPAN4.809e-5448.87Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_POPTM1.071e-5348.71Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_MEDSA1.399e-5349.57Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_OCIBA2.387e-5350.46Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]

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Properties
Property NameValue
Genbank descriptionC34208F06EF PostHarveN Citrus clementina cDNA clone C34208F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932442 ID=FC932442; Name=FC932442; organism=Citrus clementina; type=EST; length=706bp
GACAAAAGGAGGGAAAAAAAAACTATAAGAAACAATGCGTTCGTTGTCGG
AAATACAGTTACCCAAACAGAATAATAAATATGAAGAAGAAGAGAGCTAT
TCACATGCCATGCAGCTAGCAATGGGCGTAGTGCTGCCCATGGCAACCCA
GGCAGCTATTCAGCTTGGCGTTTTTGAAATCATAGCCAAAGCTGGCAAAC
TCTCGGCTCCAGAGATTGCAGCACAGTTACAAGCGCAAAACGTAAAAGCA
CCAATGATGCTAGACAGAATGCTCTGGCTTCTGGTCAGCCACCGTGTGCT
TGAGTGCTCTGTTTCTAGTGGCGAGAGGCTATATGGTCTCACCCCCGTGT
CCAAATATTTTGTTAGTAATAAAGATGGTGTTTCGTTGGGTCACTTTATG
GCCTTGCCTCTCGACAAGGTCTTCATGGAGAGTTGGTTGGGATTGAGAGA
TGCAGTTATGGAGGGAGGAATACCATTCAATAGGGTGCATGGAATGCACA
TCTTTGAGTACGCTTCCGGAAACCCCGGGTTTAATGAAACTTATCACAAG
GCAATGTTCAACCACTCAACCATAGCCATGGAGAGAATCCTGGAACATTA
CGAGGGCTTTCAGAACGTTGAGCGACTCGTCGATGTTGGAGGAGGCTTTG
GTGTCACCCTCAGTATGATTACTTCCAAATATCCCCAAATTAAGGCGATT
AACTTT
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