FC932446
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932446 vs. ExPASy Swiss-Prot
Match: EBP2_ARATH (Probable rRNA-processing protein EBP2 homolog OS=Arabidopsis thaliana GN=At3g22660 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.236e-39 Identity = 78/107 (72.90%), Postives = 89/107 (83.18%), Query Frame = 1 Query: 196 KLAEPSKQAVYNRDGLEEKLQDISWPENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAGMVKSDAHMEKVKRRLLSEQ 516 KLAEP+K A+YNRDGL +KLQDISWPE+ W HKLT++IDQ VDVNDDL RE +FYTQALEGTR+AF KL MG+ FLRPA+YYA MVKSD HMEKVK RLL E+ Sbjct: 41 KLAEPTKTAIYNRDGLLDKLQDISWPEDVDWTHKLTVEIDQGGAVDVNDDLARETAFYTQALEGTREAFGKLNEMGVNFLRPANYYAEMVKSDVHMEKVKSRLLHEK 147
BLAST of FC932446 vs. ExPASy Swiss-Prot
Match: EBP2_CAEEL (Probable rRNA-processing protein EBP2 homolog OS=Caenorhabditis elegans GN=C18A3.3 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.427e-13 Identity = 41/105 (39.05%), Postives = 66/105 (62.86%), Query Frame = 1 Query: 214 KQAVYNRDG-LEEKLQDISWPENAGWIHKLTIDIDQEQEVDV---NDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAGMVKSDAHMEKVKRRLLSEQ 516 K+ + N+ ++EKL +I+ ++ W+ L + + E+D NDD +RE +FY QA + + A+ +L ++G+ LRP DYYA M KSD HM+KV++RLL Q Sbjct: 82 KRPIINKSAEMKEKLAEIT--KDLPWVETLEV-VTPHSEMDKKVENDDFQRELNFYKQAEKAVQIAYPRLLNLGIKVLRPTDYYAEMAKSDTHMQKVRKRLLGIQ 183
BLAST of FC932446 vs. ExPASy Swiss-Prot
Match: EBP2_SCHPO (Probable rRNA-processing protein ebp2 OS=Schizosaccharomyces pombe GN=ebp2 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.349e-12 Identity = 37/106 (34.91%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 199 LAEPSKQAVYNRDGLEEKLQDISWPENAGWIHKLTIDIDQEQEVD-VNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAGMVKSDAHMEKVKRRLLSE 513 L K A+ N LE + I +P++ ++ + + ++ V DDL RE +FY Q + + AF KL+ + RP DY+A M+KSD HMEKV++ L+ E Sbjct: 86 LIRKRKLAINNTVALENIYERIKYPDDISFVENQAVTTKEPIIIENVEDDLARELAFYKQGVSSVKAAFAKLREANVLISRPHDYFAEMLKSDDHMEKVRQELIKE 191
BLAST of FC932446 vs. ExPASy Swiss-Prot
Match: EBP2_YEAST (rRNA-processing protein EBP2 OS=Saccharomyces cerevisiae GN=EBP2 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.429e-11 Identity = 36/104 (34.62%), Postives = 65/104 (62.50%), Query Frame = 1 Query: 214 KQAVYNRDGLEEKLQDIS--WPENAGWIHK-LTIDIDQEQEV-DVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAGMVKSDAHMEKVKRRLLSE 513 K V N ++ L+ + W +++ H+ +T + + ++ + D+ DD +RE +FY Q+L+ A ++L+ + +PF RP DY+A MVKSD HM+K+K +L+ E Sbjct: 192 KLTVNNTKAMKHALERVQLPWKKHSFQEHQSVTSETNTDEHIKDIYDDTERELAFYKQSLDAVLVARDELKRLKVPFKRPLDYFAEMVKSDEHMDKIKGKLIEE 295 The following BLAST results are available for this feature:
BLAST of FC932446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932446 ID=FC932446; Name=FC932446; organism=Citrus clementina; type=EST; length=637bpback to top |