FC932470

Overview
NameFC932470
Unique NameFC932470
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15457 contig Ccv1_Contig15457:82..799. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932470 vs. ExPASy Swiss-Prot
Match: PAPS2_HUMAN (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 OS=Homo sapiens GN=PAPSS2 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 4.173e-37
Identity = 81/156 (51.92%), Postives = 108/156 (69.23%), Query Frame = 1
Query:  220 ELIVDKSLRDVRKREATTLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPI 687
            EL V ++  D  + EA TLP + +TK+DLQWV VLSEGWA+PL GFMRE E+LQ +HF++L LDDG V+NMS+PIVL +  E K R+   ++  L       VAIL D E Y+H KEER +R WGTT    P++ + +  +G+WL+GGDL+VLE I
Sbjct:  226 ELFVPENKLDHVRAEAETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTL-LDDG-VINMSIPIVLPVSAEDKTRLEGCSKFVLAHGGRR-VAILRDAEFYEHRKEERCSRVWGTTCTKHPHI-KMVMESGDWLVGGDLQVLEKI 377          
BLAST of FC932470 vs. ExPASy Swiss-Prot
Match: PAPS1_HUMAN (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 OS=Homo sapiens GN=PAPSS1 PE=1 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.753e-35
Identity = 77/159 (48.43%), Postives = 108/159 (67.92%), Query Frame = 1
Query:  211 KLTELIVDKSLRDVRKREATTLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPI 687
            ++ EL V ++   + K +A TLP +++ K+D+QWV VL+EGWA+PL+GFMRE E+LQ LHF+ L   DG V+N+SVPIVL    E K R+   T  AL+  +   VAIL + E ++H KEER AR WGTT    PY+ + +   G+WLIGGDL+VL+ +
Sbjct:  233 EVKELYVPENKLHLAKTDAETLPALKINKVDMQWVQVLAEGWATPLNGFMREREYLQCLHFDCLL--DGGVINLSVPIVLTATHEDKERLDGCTAFALM-YEGRRVAILRNPEFFEHRKEERCARQWGTTCKNHPYI-KMVMEQGDWLIGGDLQVLDRV 387          
BLAST of FC932470 vs. ExPASy Swiss-Prot
Match: PAPS1_CAVPO (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 OS=Cavia porcellus GN=PAPSS1 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.753e-35
Identity = 77/159 (48.43%), Postives = 108/159 (67.92%), Query Frame = 1
Query:  211 KLTELIVDKSLRDVRKREATTLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPI 687
            ++ EL V ++   + K +A +LP +++ K+D+QWV VL+EGWA+PL GFMRE E+LQ LHF+ L   DG V+N+SVPIVL   +E K R+   T  AL+  +   VAIL + E ++H KEER AR WGTT    PY+ + +   G+WLIGGDL+VL+ I
Sbjct:  233 EVKELYVPENKLHLAKTDAESLPALQINKVDMQWVQVLAEGWATPLGGFMREREYLQCLHFDCLL--DGGVINLSVPIVLTATEEDKERLDGCTAFALI-YEGRRVAILRNPEFFEHRKEERCARQWGTTCKSHPYI-KMVMEQGDWLIGGDLQVLDRI 387          
BLAST of FC932470 vs. ExPASy Swiss-Prot
Match: PAPS1_MOUSE (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 OS=Mus musculus GN=Papss1 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.290e-35
Identity = 78/159 (49.06%), Postives = 107/159 (67.30%), Query Frame = 1
Query:  211 KLTELIVDKSLRDVRKREATTLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPI 687
            ++ EL V ++   + K +A  LP +++ K+D+QWV VL+EGWA+PL+GFMRE E+LQ LHF+ L   DG V+N+SVPIVL    E K R+   T  ALV  +   VAIL + E ++H KEER AR WGTT    PY+ + +   G+WLIGGDL+VL+ I
Sbjct:  233 EVKELYVPENKLHLAKTDAEALPALKINKVDMQWVQVLAEGWATPLNGFMREREYLQCLHFDCLL--DGGVINLSVPIVLTATHEDKERLDGCTAFALV-YEGRRVAILRNPEFFEHRKEERCARQWGTTCKNHPYI-KMVLEQGDWLIGGDLQVLDRI 387          
BLAST of FC932470 vs. ExPASy Swiss-Prot
Match: PAPS2_MOUSE (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 OS=Mus musculus GN=Papss2 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35
Identity = 88/214 (41.12%), Postives = 129/214 (60.28%), Query Frame = 1
Query:   61 KTPLPSRSLSKSNISHFAPPLTSLSFKQKTTAPHFKLRSIRAGLIEPDGGKLTELIVDKSLRDVRKREATTLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLD-----DGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPI 687
            +TP      + S++S     +  L  +++   PH  ++ I             EL V ++  D  + EA TLP + +TK+DLQWV +LSEGWA+PL GFMRE E+LQTLHF++L LD     DG V+NMS+PIVL +  + K R+   ++ AL+  +   VA+L D E Y+H KEER +R WGT     P++ + +  +G+WL+GGDL+VLE I
Sbjct:  187 ETPECVLKTNLSSVSDCVQQVVEL-LQEQNIVPHTTIKGIH------------ELFVPENKVDQIRAEAETLPSLPITKLDLQWVQILSEGWATPLKGFMREKEYLQTLHFDTL-LDGVVPRDG-VINMSIPIVLPVSADDKARLEGCSKFALM-YEGRRVALLQDPEFYEHRKEERCSRVWGTATAKHPHI-KMVMESGDWLVGGDLQVLERI 383          
BLAST of FC932470 vs. ExPASy Swiss-Prot
Match: PAPSS_URECA (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase OS=Urechis caupo PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.144e-33
Identity = 78/157 (49.68%), Postives = 102/157 (64.97%), Query Frame = 1
Query:  220 ELIVDKSLRDVRKREATTLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPIS 690
            EL V +S  +  K E   LP + +TK+D QWV VLSEGWA+PL+GFMRE E+LQ+ HF  L   DG V N S+PIVL +    K R+  S+  AL   +   +AIL   E Y+H KEER +R +GT+  G PYV + I  +G+WL+GGDLEVLE I+
Sbjct:  221 ELFVPESGLEHAKAEIVDLPTMEITKLDTQWVQVLSEGWATPLTGFMREREYLQSQHFGCLL--DGGVTNQSIPIVLPVHTADKDRLEGSSAFAL-SYEGKRIAILRTPEFYEHRKEERCSRQFGTSNAGQPYV-KMIMESGDWLVGGDLEVLERIT 373          
BLAST of FC932470 vs. ExPASy Swiss-Prot
Match: SATC1_SORC5 (Probable bifunctional SAT/APS kinase 1 OS=Sorangium cellulosum (strain So ce56) GN=sat1/cysC1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.483e-14
Identity = 54/171 (31.58%), Postives = 84/171 (49.12%), Query Frame = 1
Query:  181 RAGLIEPDGGKLTELIVDKSLRDVRKREATTLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLE-PIS 690
            RAGL  P GG+L +  V    R         LPR+RL +     + ++  G  SPL GFM   ++L+ +     RL+ G V   S+PI LA+  E   R+   + VAL   D  VV +L  ++ +   KE      +G T  G P V   +  +G+  +GG++ ++E P+S
Sbjct:  187 RAGLAPPHGGELVDRFVRGDARQRLLERVAGLPRVRLDERGASDLELIGNGAYSPLKGFMTSRDYLRVV--RERRLESGLV--WSIPITLAVPGEDAARLSLGSEVALASPDGRVVGVLELVDRWTPDKEVEARNVYGATDEGHPGV-AYLRSSGDVYLGGEVWLIERPLS 352          
BLAST of FC932470 vs. ExPASy Swiss-Prot
Match: MET3_SCHPO (Sulfate adenylyltransferase OS=Schizosaccharomyces pombe GN=sua1 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.483e-14
Identity = 52/154 (33.77%), Postives = 79/154 (51.30%), Query Frame = 1
Query:  232 DKSLRDVRKREATTLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDD--NVVAILNDIEIYKHPKEERIARTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPI 687
            D  LR+  ++EAT+LP+I L++     V ++  G  SPL GFM + ++L  +   +LRL  G V    +PI L +++ Q   +    RVAL+D  D   V+AIL   + Y   K     + +G      P VD     AGN  +GG L+ + PI
Sbjct:   13 DAPLREQLEQEATSLPKIVLSERQFCDVELILNGGFSPLDGFMNQKDYLNVV--ENLRLSTGEV--FPIPITLDLNESQADSLKAGDRVALLDPRDGQTVIAILTVEDKYTPDKANEAEKVFGANDRAHPAVDYLFGRAGNVYVGGKLQAVTPI 162          
BLAST of FC932470 vs. ExPASy Swiss-Prot
Match: SAT_RUBXD (Sulfate adenylyltransferase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=sat PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.463e-13
Identity = 54/171 (31.58%), Postives = 89/171 (52.05%), Query Frame = 1
Query:  193 IEPDGGKLTELIVDKSLRDVRKREATTLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVA--ILNDIEIYKHPKEERIA-RTWGTTAPGLPYVDQAITYAGNWLIGGDLEVLEPISTT 696
            I P GG L +  V    R+ R++ A  LPRI L   +L  + ++  G  SPL+GFM   ++   +    +RL DG  +  S+PI L++ +E+ R   E   VAL + +  +VA  ++ D   Y    E ++  RT  T  PG+     A+   G+ L+GG++ +L+  +TT
Sbjct:    9 ITPHGGTLVDRRVPVGEREERRQRAAELPRIVLGPRNLSDLEMIGTGVFSPLTGFMGREDYESVV--EEMRLADG--LPWSIPITLSVSEEEARSFEEGDEVALANGEGEIVATMVVEDRYTYDRAHEAKLVYRTTDTDHPGV----AALFRQGDVLVGGEVSLLDDGTTT 171          
BLAST of FC932470 vs. ExPASy Swiss-Prot
Match: MET3_USTMA (Sulfate adenylyltransferase OS=Ustilago maydis GN=MET3 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13
Identity = 53/167 (31.74%), Postives = 93/167 (55.69%), Query Frame = 1
Query:  199 PDGGKLTELIV-DKSLRDVRKREATTLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQ--KRRIGESTRVALVD-SDDNVVAILNDIEIYKHPKEERIARTWGT---TAPGLPYVDQAITYAGNWLIGGDLEVL 678
            P GG L +L+V D  +    ++EA TLP I LT+  L  + ++  G  SPL GFM ++++   L  +++RL DG++  M  PI L +D++Q    +I +  R+AL D  DDN +AI+   ++Y   K       +G+     P + Y+ +++    N+ +GGD++ +
Sbjct:    5 PHGGVLKDLLVRDAPIAAQLRQEADTLPEIVLTERQLCDLELIINGGFSPLQGFMNQTDYNGCL--DNMRLADGNLFPM--PITLDVDEQQIEALKIQQGARIALRDPRDDNAIAIITVTDVYAVDKVREATAVFGSDDLAHPAITYLHKSVK---NFYVGGDVQAV 164          
The following BLAST results are available for this feature:
BLAST of FC932470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
PAPS2_HUMAN4.173e-3751.92Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
PAPS1_HUMAN1.753e-3548.43Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
PAPS1_CAVPO1.753e-3548.43Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
PAPS1_MOUSE2.290e-3549.06Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
PAPS2_MOUSE5.101e-3541.12Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
PAPSS_URECA8.144e-3349.68Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
SATC1_SORC56.483e-1431.58Probable bifunctional SAT/APS kinase 1 OS=Sorangiu... [more]
MET3_SCHPO6.483e-1433.77Sulfate adenylyltransferase OS=Schizosaccharomyces... [more]
SAT_RUBXD2.463e-1331.58Sulfate adenylyltransferase OS=Rubrobacter xylanop... [more]
MET3_USTMA4.202e-1331.74Sulfate adenylyltransferase OS=Ustilago maydis GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34208H10EF PostHarveN Citrus clementina cDNA clone C34208H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932470 ID=FC932470; Name=FC932470; organism=Citrus clementina; type=EST; length=717bp
GGTCCCTTGGGTTCTCTCTCAGTTCAATTAACAATGGTCACCATGTCCAC
TCTGTTCGCCAAAACCCCACTTCCCTCCCGATCCCTCTCCAAATCTAATA
TTTCCCATTTTGCTCCTCCCCTCACATCCCTCTCCTTCAAGCAAAAGACC
ACCGCCCCCCATTTCAAGCTCCGGAGTATCCGGGCCGGGCTGATCGAACC
GGACGGCGGGAAGCTGACGGAGCTGATCGTCGACAAGTCGTTGAGGGACG
TTAGGAAGCGGGAGGCGACGACGCTGCCGAGGATCAGGCTGACGAAGATT
GACCTTCAATGGGTACACGTGTTGAGCGAGGGTTGGGCCAGCCCTCTAAG
CGGGTTCATGAGAGAATCCGAGTTCCTCCAAACTCTTCATTTCAACTCGC
TCCGTCTGGACGACGGGTCGGTTGTTAACATGTCCGTGCCGATCGTCTTG
GCGATCGACGACGAGCAGAAGCGTCGGATTGGTGAGTCGACGCGTGTCGC
TCTCGTTGACTCCGATGACAACGTCGTTGCGATTTTGAACGACATTGAGA
TCTACAAGCACCCCAAAGAAGAAAGGATAGCCCGAACATGGGGGACAACT
GCCCCTGGTCTACCTTATGTTGACCAGGCCATAACTTATGCTGGAAATTG
GCTGATTGGAGGTGACTTGGAGGTGCTAGAACCAATCAGTACCACGATGG
TCTTGATCGTTTCCGAT
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