FC932484
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932484 vs. ExPASy Swiss-Prot
Match: RL2_ASHGO (60S ribosomal protein L2 OS=Ashbya gossypii GN=RPL2 PE=4 SV=1) HSP 1 Score: 356.295 bits (913), Expect = 1.295e-98 Identity = 165/221 (74.66%), Postives = 195/221 (88.24%), Query Frame = 3 Query: 36 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIRNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGNTSTSGR 698 MGRVIRNQRKG GSIFT++TRL + A+ RTLD+AE HGY RGVVK+I+HDAGRGAPLAKV FR PYK+K+ ETFIANEG++TGQFIYAGKNA+L VGNILPL S+PEGT+++NVEE+ GDRGAL RTSGNYV VIGHNP++ KTR++LPSGAKK++ + ARG++G++AGGGR DKPLLKAGRA HK+ VKRNSWPKTRGVAMNPVDHPHGGGN G+ Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGVVKQIVHDAGRGAPLAKVVFRDPYKYKLREETFIANEGVHTGQFIYAGKNASLNVGNILPLGSVPEGTIVSNVEERPGDRGALARTSGNYVIVIGHNPDENKTRIRLPSGAKKIVSSDARGVIGVIAGGGRVDKPLLKAGRAFHKYKVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGK 221 HSP 2 Score: 25.409 bits (54), Expect = 1.295e-98 Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 2 Query: 680 HQHIG*ASTISRYA 721 HQHIG ASTISR A Sbjct: 216 HQHIGKASTISRGA 229
BLAST of FC932484 vs. ExPASy Swiss-Prot
Match: RL2_CANGA (60S ribosomal protein L2 OS=Candida glabrata GN=RPL2 PE=4 SV=1) HSP 1 Score: 351.673 bits (901), Expect = 3.149e-97 Identity = 163/221 (73.76%), Postives = 193/221 (87.33%), Query Frame = 3 Query: 36 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIRNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGNTSTSGR 698 MGRVIRNQRKG GSIFT++TRL + A+ RTLD+AE HGY RGVVK+I+HDAGRGAPLAKV FR PYK+K+ E FIANEG++TGQFIYAGK A+L VGN+LPL S+PEGT+++NVEEK GDRGAL R SGNYV +IGHNP++ KTRV+LPSGAKK+I + ARG++G++AGGGRTDKPLLKAGRA HK+ +KRNSWPKTRGVAMNPVDHPHGGGN G+ Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGVVKQIVHDAGRGAPLAKVVFRDPYKYKLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPGDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKIISSDARGVIGVIAGGGRTDKPLLKAGRAFHKYKLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGK 221 HSP 2 Score: 25.409 bits (54), Expect = 3.149e-97 Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 2 Query: 680 HQHIG*ASTISRYA 721 HQHIG ASTISR A Sbjct: 216 HQHIGKASTISRGA 229
BLAST of FC932484 vs. ExPASy Swiss-Prot
Match: RL2_YEAST (60S ribosomal protein L2 OS=Saccharomyces cerevisiae GN=RPL2A PE=1 SV=3) HSP 1 Score: 347.436 bits (890), Expect = 5.868e-96 Identity = 160/221 (72.40%), Postives = 192/221 (86.88%), Query Frame = 3 Query: 36 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIRNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGNTSTSGR 698 MGRVIRNQRKG GSIFT++TRL + A+ RTLD+AE HGY RG+VK+I+HD+GRGAPLAKV FR PYK+++ E FIANEG++TGQFIYAGK A+L VGN+LPL S+PEGT+++NVEEK GDRGAL R SGNYV +IGHNP++ KTRV+LPSGAKKVI + ARG++G++AGGGR DKPLLKAGRA HK+ +KRNSWPKTRGVAMNPVDHPHGGGN G+ Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLAKVVFRDPYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPGDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLLKAGRAFHKYRLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGK 221 HSP 2 Score: 25.409 bits (54), Expect = 5.868e-96 Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 2 Query: 680 HQHIG*ASTISRYA 721 HQHIG ASTISR A Sbjct: 216 HQHIGKASTISRGA 229
BLAST of FC932484 vs. ExPASy Swiss-Prot
Match: RL2_SCHPO (60S ribosomal protein L2 OS=Schizosaccharomyces pombe GN=rpl2a PE=2 SV=2) HSP 1 Score: 341.273 bits (874), Expect = 3.144e-93 Identity = 165/226 (73.01%), Postives = 188/226 (83.19%), Query Frame = 3 Query: 36 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIRNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGNTSTSGRPRPSP 713 MGRVIR QRK G IF A+TRL K AQ RTLDFAE HGY RGVV++IIHD GRGAPLAKV FR+PY ++ ETF+A EGMYTGQF+Y GKNAALTVGN+LP+ MPEGT+I+NVEEKAGDRGALGR+SGNYV ++GH+ + GKTRVKLPSGAKKV+ ++ARG+VGIVAGGGR DKPLLKAGRA HK+ VKRN WP+TRGVAMNPVDHPHGGGN G P Sbjct: 1 MGRVIRAQRKS-GGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLAKVAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEKAGDRGALGRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPLLKAGRAFHKYRVKRNCWPRTRGVAMNPVDHPHGGGNHQHVGHSTTVP 225
BLAST of FC932484 vs. ExPASy Swiss-Prot
Match: RL8_SPOFR (60S ribosomal protein L8 OS=Spodoptera frugiperda GN=RpL8 PE=2 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 1.105e-85 Identity = 148/221 (66.97%), Postives = 176/221 (79.64%), Query Frame = 3 Query: 36 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIRNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGNTSTSGR 698 MGRVIR QRKG GS+F ++T+ K + R+LD+AE HGY +GVVK+IIHD GRGAPLA V FR PYKFK E FIA EG+YTGQF+Y GK A L VGN++P+ +MPEGT++ N+EEK GDRG L R SGN+ TVIGHNP+ +TRVKLPSGAKKV+ ++ RGMVGIVAGGGR DKP+LKAGRA HK+ VKRN WP RGVAMNPV+HPHGGGN G+ Sbjct: 1 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGK 221 HSP 2 Score: 23.0978 bits (48), Expect = 1.105e-85 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2 Query: 680 HQHIG*ASTISR 715 HQHIG AST+ R Sbjct: 216 HQHIGKASTVKR 227
BLAST of FC932484 vs. ExPASy Swiss-Prot
Match: RL8_MAMBR (60S ribosomal protein L8 OS=Mamestra brassicae GN=RpL8 PE=2 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 1.105e-85 Identity = 148/221 (66.97%), Postives = 176/221 (79.64%), Query Frame = 3 Query: 36 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIRNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGNTSTSGR 698 MGRVIR QRKG GS+F ++T+ K + R+LD+AE HGY +GVVK+IIHD GRGAPLA V FR PYKFK E FIA EG+YTGQF+Y GK A L VGN++P+ +MPEGT++ N+EEK GDRG L R SGN+ TVIGHNP+ +TRVKLPSGAKKV+ ++ RGMVGIVAGGGR DKP+LKAGRA HK+ VKRN WP RGVAMNPV+HPHGGGN G+ Sbjct: 1 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGK 221 HSP 2 Score: 23.0978 bits (48), Expect = 1.105e-85 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2 Query: 680 HQHIG*ASTISR 715 HQHIG AST+ R Sbjct: 216 HQHIGKASTVKR 227
BLAST of FC932484 vs. ExPASy Swiss-Prot
Match: RL8_DROME (60S ribosomal protein L8 OS=Drosophila melanogaster GN=RpL8 PE=2 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 1.442e-85 Identity = 150/221 (67.87%), Postives = 175/221 (79.19%), Query Frame = 3 Query: 36 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIRNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGNTSTSGR 698 MGRVIR QRKG GS+F A+ + K A+ R+LDFAE GY RGVVK+IIHD GRGAPLA V FR PY++K+ E FIA EGM+TGQF+Y G+ A L +GN++PL+ MPEGT+I N+EEK GDRG L RTSGNY TVI HN + KTRVKLPSGAKKV+ + R MVGIVAGGGR DKP+LKAGRA HK+ VKRNSWPK RGVAMNPV+HPHGGGN G+ Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGK 221 HSP 2 Score: 23.0978 bits (48), Expect = 1.442e-85 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2 Query: 680 HQHIG*ASTISR 715 HQHIG AST+ R Sbjct: 216 HQHIGKASTVKR 227
BLAST of FC932484 vs. ExPASy Swiss-Prot
Match: RL8_ANOGA (60S ribosomal protein L8 OS=Anopheles gambiae GN=RpL8 PE=2 SV=2) HSP 1 Score: 312.383 bits (799), Expect = 9.265e-85 Identity = 145/221 (65.61%), Postives = 174/221 (78.73%), Query Frame = 3 Query: 36 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIRNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGNTSTSGR 698 MGRVIR QRKG GS+F A+T+ K + R LD+AE HGY +GVVK+IIHD GRGAPLA V FR PY+F++ + FIA EGMYTGQF+Y G+ A L +GN+LP+ MPEGT++ N+EEK GDRG L RTSGNY +VI HNP+ +TRVKLPSGAKKV+ + R M+GIVAGGGR DKP+LKAGRA HK+ VKRN WPK RGVAMNPV+HPHGGGN G+ Sbjct: 1 MGRVIRAQRKGAGSVFRAHTKKRKGEPKLRHLDYAERHGYLKGVVKQIIHDPGRGAPLAVVNFRDPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVLPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMIGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGK 221 HSP 2 Score: 23.0978 bits (48), Expect = 9.265e-85 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2 Query: 680 HQHIG*ASTISR 715 HQHIG AST+ R Sbjct: 216 HQHIGKASTVKR 227
BLAST of FC932484 vs. ExPASy Swiss-Prot
Match: RL8_AEDAL (60S ribosomal protein L8 OS=Aedes albopictus GN=RpL8 PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 9.265e-85 Identity = 147/221 (66.52%), Postives = 172/221 (77.83%), Query Frame = 3 Query: 36 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIRNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGNTSTSGR 698 MGRVIR QRKG GS+FTA+T+ K + R LD+AE HGY +G VK+IIHD GRGAPLA V FR PYKF + + FIA EGMYTGQF+Y GK A L +GN+LP+ MPEGT++ N+EEK GDRG L RTSGNY +VI HNP+ +TRVKLPSGAKKV+ + R MVGIVAGGGR DKP+LKAGRA K+ VKRN WPK RGVAMNPV+HPHGGGN G+ Sbjct: 1 MGRVIRAQRKGEGSVFTAHTKKRKGEPKLRALDYAERHGYLKGTVKQIIHDPGRGAPLAVVHFRDPYKFNVRKQLFIAAEGMYTGQFVYCGKRAQLQIGNVLPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRIDKPILKAGRAYRKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGK 221 HSP 2 Score: 23.0978 bits (48), Expect = 9.265e-85 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2 Query: 680 HQHIG*ASTISR 715 HQHIG AST+ R Sbjct: 216 HQHIGKASTVKR 227
BLAST of FC932484 vs. ExPASy Swiss-Prot
Match: RL8_XENTR (60S ribosomal protein L8 OS=Xenopus tropicalis GN=rpl8 PE=2 SV=3) HSP 1 Score: 311.612 bits (797), Expect = 2.667e-84 Identity = 148/231 (64.07%), Postives = 177/231 (76.62%), Query Frame = 3 Query: 36 MGRVIRNQRKGRGSIFTANTRLNKAPAQFRTLDFAEAHGYTRGVVKEIIHDAGRGAPLAKVQFRHPYKFKMITETFIANEGMYTGQFIYAGKNAALTVGNILPLASMPEGTVITNVEEKAGDRGALGRTSGNYVTVIGHNPEDGKTRVKLPSGAKKVIRNTARGMVGIVAGGGRTDKPLLKAGRAKHKFAVKRNSWPKTRGVAMNPVDHPHGGGNTSTSGRP----RPSPA 716 MGRVIR QRKG GS+F A+ + K A+ R +DFAE HGY +G+VK+IIHD GRGAPLAKV FR PY+FK TE F+A EG++TGQF+Y GK A L +GN+LP+ +MPEGT++ VEEK GDRG L R SGNY TVI HNPE KTRVKLPSG+KKVI + R +VG+VAGGGR DKP+LKAGRA HK+ KRN WP+ RGVAMNPV+HP GGGN G+P R +PA Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAIVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231 The following BLAST results are available for this feature:
BLAST of FC932484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932484 ID=FC932484; Name=FC932484; organism=Citrus clementina; type=EST; length=721bpback to top |