FC932485

Overview
NameFC932485
Unique NameFC932485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932485 vs. ExPASy Swiss-Prot
Match: YOP1_ASPFU (Protein yop1 OS=Aspergillus fumigatus GN=yop1 PE=3 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.051e-72
Identity = 129/154 (83.77%), Postives = 145/154 (94.16%), Query Frame = 3
Query:    3 LDKELSKYPVLANLERQTNVPKVYVVLGLVGIYFFLVFFNIAGEFLVNFAGFLVPGYYSLQALFTSSIKDDTQWLTYWVVFAFLTVIESAISAAYWFPFYYIFKFVLIMWMALPQTSGAQIVFHSFLQPVVGRFFSNNGTSSNLRAQAEAASKA 464
            LDKELSKYPVL NLERQT+VPKVYV+LGLVGIY FLVFFNIAGEFLVNFAGFL+PGYYSL ALFTS   DDTQWLTYWVV+A LTV+ESAI+AAYWFPFYYIFKFVLI+WM+LPQT+GAQ+VFHSFLQPV+GRFF++  TS+NLRAQA+AASK+
Sbjct:   15 LDKELSKYPVLNNLERQTSVPKVYVILGLVGIYTFLVFFNIAGEFLVNFAGFLIPGYYSLNALFTSGKADDTQWLTYWVVYALLTVVESAINAAYWFPFYYIFKFVLILWMSLPQTNGAQVVFHSFLQPVLGRFFTSGSTSANLRAQADAASKS 168          
BLAST of FC932485 vs. ExPASy Swiss-Prot
Match: YOP1_EMENI (Protein yop1 OS=Emericella nidulans GN=yop1 PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.376e-64
Identity = 115/154 (74.68%), Postives = 136/154 (88.31%), Query Frame = 3
Query:    3 LDKELSKYPVLANLERQTNVPKVYVVLGLVGIYFFLVFFNIAGEFLVNFAGFLVPGYYSLQALFTSSIKDDTQWLTYWVVFAFLTVIESAISAAYWFPFYYIFKFVLIMWMALPQTSGAQIVFHSFLQPVVGRFFSNNGTSSNLRAQAEAASKA 464
            LDKELSKYPVL NLERQT+VPKVYV+LGL GIY FLVFFNIAG+ LVN AGF++P YYSL ALF++   DDTQWLTYWVV+AF TV+ESAISA YWFPFYYIFKF L++W+ALPQT+GAQIVF S +QP+VGR+F+   TS+NLRAQA+AA+K+
Sbjct:   15 LDKELSKYPVLNNLERQTSVPKVYVILGLGGIYTFLVFFNIAGQLLVNLAGFILPTYYSLDALFSAGKADDTQWLTYWVVYAFFTVVESAISAPYWFPFYYIFKFALVLWLALPQTNGAQIVFKSLVQPLVGRYFTGGSTSANLRAQADAATKS 168          
BLAST of FC932485 vs. ExPASy Swiss-Prot
Match: YOP1_NEUCR (Protein yop-1 OS=Neurospora crassa GN=yop-1 PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.398e-55
Identity = 95/150 (63.33%), Postives = 118/150 (78.67%), Query Frame = 3
Query:    3 LDKELSKYPVLANLERQTNVPKVYVVLGLVGIYFFLVFFNIAGEFLVNFAGFLVPGYYSLQALFTSSIKDDTQWLTYWVVFAFLTVIESAISAAYWFPFYYIFKFVLIMWMALPQTSGAQIVFHSFLQPVVGRFFSNNGTSSNLRAQAEA 452
            LDKELSKYP L NLE+ T VPK Y V+GLV +YFFL+ FN+ G+ L N AGF++PGYYSL ALFT+S +DDTQWLTYWVVF+  TVIES IS  YWFPFY+ FKFV ++W++LP   GA+ +F SFL P +GR+F N  T+S LRA+A+A
Sbjct:   15 LDKELSKYPTLNNLEKTTGVPKAYAVIGLVALYFFLIIFNLGGQLLTNLAGFVLPGYYSLNALFTASKQDDTQWLTYWVVFSLFTVIESLISVVYWFPFYFTFKFVFLLWLSLPTFKGAETIFRSFLAPTLGRYFQNGSTASGLRAKADA 164          
BLAST of FC932485 vs. ExPASy Swiss-Prot
Match: YOP1_MAGGR (Protein YOP1 OS=Magnaporthe grisea GN=YOP1 PE=3 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 3.516e-52
Identity = 93/155 (60.00%), Postives = 119/155 (76.77%), Query Frame = 3
Query:    3 LDKELSKYPVLANLERQTNVPKVYVVLGLVGIYFFLVFFNIAGEFLVNFAGFLVPGYYSLQALFTSSIKDDTQWLTYWVVFAFLTVIESAISAAYWFPFYYIFKFVLIMWMALPQTSGAQIVFHSFLQPVVGRFF-SNNGTSSNLRAQAEAASKA 464
            LD+ELSKYP L NLER T VPK Y V+G+V +YFFL+ FN+ G+ L N AGF +P YYSL ALF+++ +DDTQWLTYWVVFA  TV+ES +S  YWFPFYY+FKFV ++W++LP   GA I+F SFL P + R+F  +   SSNLRA+A++A KA
Sbjct:   15 LDRELSKYPALNNLERTTGVPKAYAVVGVVVLYFFLIVFNLGGQLLTNIAGFGIPAYYSLDALFSANKEDDTQWLTYWVVFAMFTVVESLVSVVYWFPFYYMFKFVFLLWLSLPAFKGADIIFRSFLAPTLSRYFVHSRPASSNLRAKADSAGKA 169          
BLAST of FC932485 vs. ExPASy Swiss-Prot
Match: YOP1_YARLI (Protein YOP1 OS=Yarrowia lipolytica GN=YOP1 PE=3 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 7.118e-37
Identity = 78/160 (48.75%), Postives = 106/160 (66.25%), Query Frame = 3
Query:    3 LDKELSKYPVLANLERQTNVPKVYVVLGLVGIYFFLVFFNIAG--EFLVNFAGFLVPGYYSLQALFTSSIKDDTQWLTYWVVFAFLTVIESAISA-AYWFPFYYIFKFVLIMWMALPQTSGAQIVFHSFLQPVVGRFFS---NNGTSSNLRAQAEAASKA 464
            +DKEL KYP L  LE+Q  VPK Y++LG VG YF L+F NI G  + L N AG ++PGYYSL AL T    DDTQ+LTYWVVFA L V E    A  YW PFYY+FK   ++++ LPQ  GA++V+ + ++P+  +  +   + G S +L+AQA++A  A
Sbjct:   15 IDKELEKYPALKELEKQIPVPKSYILLGFVGFYFILIFLNIGGIGQLLSNIAGLVIPGYYSLLALETPGKADDTQYLTYWVVFATLNVFEFWSKAILYWVPFYYLFKTAFLLYIGLPQYGGAELVYKAIVKPLAQKLVNIQPHGGPSDSLKAQAQSAVDA 174          
BLAST of FC932485 vs. ExPASy Swiss-Prot
Match: YOP1_USTMA (Protein YOP1 OS=Ustilago maydis GN=YOP1 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.144e-33
Identity = 70/152 (46.05%), Postives = 92/152 (60.53%), Query Frame = 3
Query:    3 LDKELSKYPVLANLERQTNVPKVYVVLGLVGIYFFLVFFNIAGEFLVNFAGFLVPGYYSLQALFTSSIKDDTQWLTYWVVFAFLTVIESAIS-AAYWFPFYYIFKFVLIMWMALPQTSGAQIVFHSFLQPVVGRFFSNNGTSSNLRAQAEAA 455
            +DKELS+YP L   E+   VPK Y  LG  GI+   VFFNIA  FL N  GF VP Y+SL+AL +   +DD QWLTYWVVF   T +E+ I+   Y+ P+YY  K + I+W+ LPQT GA++V+   ++PV   F +   T     A   AA
Sbjct:   19 IDKELSRYPALKKFEQTVPVPKAYAALGAFGIFTLFVFFNIAAGFLTNLLGFFVPAYFSLKALESPQPQDDIQWLTYWVVFGLFTFLETFINIVLYYIPWYYTIKTLAIVWLMLPQTQGAKMVYSRIIRPV---FLTTQKTVHQANASTPAA 167          
BLAST of FC932485 vs. ExPASy Swiss-Prot
Match: YOP1_KLULA (Protein YOP1 OS=Kluyveromyces lactis GN=YOP1 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.095e-32
Identity = 69/156 (44.23%), Postives = 101/156 (64.74%), Query Frame = 3
Query:    3 LDKELSKYPVLANLERQTNVPKVYVVLGLVGIYFFLVFFNIAG--EFLVNFAGFLVPGYYSLQALFTSSIKDDTQWLTYWVVFAFLTVIESAISA-AYWFPFYYIFKFVLIMWMALPQTSGAQIVFHSFLQPVVGRFFS-NNGTSSNLRAQAEAAS 458
            LD + +   +L+ +E QT +P+ YV++GLV +YF L+F N+ G  E L NF GF +P YYSL+AL T++  DDTQ LTYW+VF+FL+VIE    A  YW PFY+ FK V ++++A+P   GAQ+V+   + P   ++     G S  L  + EAA+
Sbjct:   15 LDTKFAGNQILSRIEAQTKLPRSYVIVGLVAVYFLLIFINVGGIGEILSNFVGFCIPTYYSLKALKTATSTDDTQLLTYWIVFSFLSVIEFWSKAILYWVPFYWFFKTVFLLYIAIPSFGGAQLVYTRLISPFSDKYLPIVEGKSGELAQKVEAAA 170          
BLAST of FC932485 vs. ExPASy Swiss-Prot
Match: YOP1_CANGA (Protein YOP1 OS=Candida glabrata GN=YOP1 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31
Identity = 66/157 (42.04%), Postives = 101/157 (64.33%), Query Frame = 3
Query:    3 LDKELSKYPVLANLERQTNVPKVYVVLGLVGIYFFLVFFNIAG--EFLVNFAGFLVPGYYSLQALFTSSIKDDTQWLTYWVVFAFLTVIESAISA-AYWFPFYYIFKFVLIMWMALPQTSGAQIVFHSFLQPVVGRFFSNNGTSSNLRAQAEAASKA 464
            LD + +   VL  LE++TN+PK Y+V+G    Y  L+F N+ G  E L NFAGF++P YYS+ AL T++ KDDTQ LTYW+VF+FL VIE    A  Y  PFY+  K + ++++ALPQT GA ++++ F+ P+  ++      +  ++   + AS+A
Sbjct:   15 LDTKFAGNNVLNQLEQRTNLPKSYLVVGSTIFYLLLIFINVGGIGEILGNFAGFVIPAYYSILALKTTTTKDDTQLLTYWIVFSFLNVIEFWSKALLYIIPFYWFLKTIFLLYIALPQTGGATMIYNRFISPLTDKYILGPKKTDGVQQSVKEASRA 171          
BLAST of FC932485 vs. ExPASy Swiss-Prot
Match: YOP1_CRYNE (Protein YOP1 OS=Cryptococcus neoformans GN=YOP1 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.134e-29
Identity = 64/145 (44.14%), Postives = 91/145 (62.76%), Query Frame = 3
Query:    3 LDKELSKYPVLANLERQTNVPKVYVVLGLVGIYFFLVFFNIAG--EFLVNFAGFLVPGYYSLQALFTSSIKDDTQWLTYWVVFAFLTVIESAISAA--YWFPFYYIFKFVLIMWMALPQTSGAQIVFHSFLQPVVGRFFSNNGTS 425
            LD EL+KYP+L  LE+QT VPK Y V+ L      L+FFN+ G  + + N  G+ +P Y S+ A+ +    DD QWLTYWVVF  L ++ES    A  YW P Y++FK +  +W+ LP T GA+I++  FL+P+VG   S + +S
Sbjct:   32 LDAELNKYPILRQLEQQTKVPKAYGVIALGFSSVLLIFFNMFGLAQPISNLIGWALPAYLSILAIESPQTNDDKQWLTYWVVFGSLNLVESMGLRAVLYWVPMYFVFKTLFTIWLMLPATRGAEILYFHFLRPMVGNVKSRSQSS 176          
BLAST of FC932485 vs. ExPASy Swiss-Prot
Match: YOP1_YEAST (Protein YOP1 OS=Saccharomyces cerevisiae GN=YOP1 PE=1 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 9.318e-29
Identity = 69/159 (43.40%), Postives = 98/159 (61.64%), Query Frame = 3
Query:    6 DKELSKYPVLANLERQTNVPKVYVVLGLVGIYFFLVFFNIAG--EFLVNFAGFLVPGYYSLQALFTSSIKDDTQWLTYWVVFAFLTVIESAISA-AYWFPFYYIFKFVLIMWMALPQTSGAQIVFHSFLQPVVGRFFSNNGTSS---NLRAQAEAASKA 464
            D + S   +L  LE +TN+PK Y+V GL   Y  L+F N+ G  E L NFAGF++P Y SL AL T +  DDTQ LTYW+VF+FL+VIE    A  Y  PFY+  K V ++++ALPQT GA++++   + P+  R+   + + +    +RA    ASKA
Sbjct:   16 DTKYSGNRILQQLENKTNLPKSYLVAGLGFAYLLLIFINVGGVGEILSNFAGFVLPAYLSLVALKTPTSTDDTQLLTYWIVFSFLSVIEFWSKAILYLIPFYWFLKTVFLIYIALPQTGGARMIYQKIVAPLTDRYILRDVSKTEKDEIRASVNEASKA 174          
The following BLAST results are available for this feature:
BLAST of FC932485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
YOP1_ASPFU1.051e-7283.77Protein yop1 OS=Aspergillus fumigatus GN=yop1 PE=3... [more]
YOP1_EMENI1.376e-6474.68Protein yop1 OS=Emericella nidulans GN=yop1 PE=3 S... [more]
YOP1_NEUCR3.398e-5563.33Protein yop-1 OS=Neurospora crassa GN=yop-1 PE=3 S... [more]
YOP1_MAGGR3.516e-5260.00Protein YOP1 OS=Magnaporthe grisea GN=YOP1 PE=3 SV... [more]
YOP1_YARLI7.118e-3748.75Protein YOP1 OS=Yarrowia lipolytica GN=YOP1 PE=3 S... [more]
YOP1_USTMA8.144e-3346.05Protein YOP1 OS=Ustilago maydis GN=YOP1 PE=3 SV=1[more]
YOP1_KLULA3.095e-3244.23Protein YOP1 OS=Kluyveromyces lactis GN=YOP1 PE=3 ... [more]
YOP1_CANGA9.955e-3142.04Protein YOP1 OS=Candida glabrata GN=YOP1 PE=3 SV=1[more]
YOP1_CRYNE7.134e-2944.14Protein YOP1 OS=Cryptococcus neoformans GN=YOP1 PE... [more]
YOP1_YEAST9.318e-2943.40Protein YOP1 OS=Saccharomyces cerevisiae GN=YOP1 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34209B03EF PostHarveN Citrus clementina cDNA clone C34209B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932485 ID=FC932485; Name=FC932485; organism=Citrus clementina; type=EST; length=720bp
AGCTTGACAAGGAGCTCTCCAAGTACCCTGTCCTTGCCAACCTTGAGCGT
CAGACCAATGTCCCCAAGGTCTATGTCGTCCTGGGCCTTGTTGGAATCTA
CTTCTTCCTGGTCTTCTTTAACATCGCGGGCGAGTTCCTCGTCAACTTTG
CTGGTTTCCTGGTCCCCGGTTACTACTCCCTGCAGGCGCTCTTCACCTCG
AGCATCAAGGACGACACCCAGTGGCTCACGTACTGGGTTGTCTTCGCCTT
CCTGACGGTCATTGAGAGCGCTATCAGCGCCGCTTACTGGTTCCCCTTCT
ACTACATCTTCAAGTTCGTCCTGATCATGTGGATGGCTCTTCCCCAGACC
AGCGGTGCCCAAATTGTCTTCCACTCCTTCCTCCAGCCCGTGGTTGGCCG
CTTCTTCTCCAACAACGGTACCTCCTCCAACCTCCGTGCTCAGGCCGAGG
CTGCGAGCAAGGCCCACTCCACCTAAACGGGGTGTGGTCTAGCCTCTCAG
CGGAGAATCGCACGGGCAATACAAGCTCCGTGGAACCTGCTTTTGCGTGG
GTCGCGGATCCGATTCTCTGTGCCCGGCAGGACTCCAAGCACGAAGTGAA
GTGGTTGGCTCAAAGCTTCGTTGCTATGATTAAATAGGAGCAGTGCACTA
GCTGGAATATGAAATAGAGAGGACCCGAGGAAATGTTGCGACGGGTCCGA
AGTTGGATGTGCGCTGAAAT
back to top