FC932487

Overview
NameFC932487
Unique NameFC932487
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932487 vs. ExPASy Swiss-Prot
Match: GCP2_ARATH (Probable glutamate carboxypeptidase 2 OS=Arabidopsis thaliana GN=AMP1 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.671e-19
Identity = 71/236 (30.08%), Postives = 107/236 (45.34%), Query Frame = 3
Query:   15 VLQVLSRISDPHA-NATLKDLWDKKGSKITPLG-AGSDYVAFQDIAGTSSIDFGFEGEPYP-YHSCYETYDWMVKFADPDFQYHKILAQFWGXXXXXXSESPMLPFDLEVYGNSIEGWVKDLDKFAKSKKAKVDMQPMFKAATEMKANAVTFQSWNKIWHDTVWGMGG--YESN--IMAVQRVTHNVRMAAFETNLLDLEEGGGIPNRTQFRHVIFGPELRSGYDASIFPAIRDSI 701
            ++ VL  + DP A   T+++ +  + + I  L    SD+  F   AG  SID  + G  YP YH+ +++YDWM+  ADP F  H  +A  WG      ++ P++PFD   Y   ++      DK +K  + KV + P+  A  E    A       K   D    + G  Y  N    A +R   N R+   E   LD E   GI  +  F+H+++GP          FP I D+I
Sbjct:  452 LVDVLKLVQDPDAVGLTVEETFKSQNNIIQRLSRVDSDFSGFLHHAGIPSIDM-YYGADYPVYHTAFDSYDWMIHNADPLFHRHVAMAGIWGLLGILLADEPLIPFDYISYAEQLQA---HRDKLSKLLEGKVSVNPLSMAIQEFSLVA-------KEAADEAKKLKGKSYSKNDVAAAAKRRELNDRLMLVERGFLDAE---GIKGKEWFKHLVYGPAAEPESKLGFFPGIADAI 673          
BLAST of FC932487 vs. ExPASy Swiss-Prot
Match: FOLH1_RAT (Glutamate carboxypeptidase 2 OS=Rattus norvegicus GN=Folh1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13
Identity = 61/234 (26.07%), Postives = 99/234 (42.31%), Query Frame = 3
Query:   60 TLKDLWDKKGS--------KITPLGAGSDYVAFQDIAGTSSIDFGF-------EGEPYP-YHSCYETYDWMVKFADPDFQYHKILAQFWGXXXXXXSESPMLPFDLEVYGNSIEGWVKDLDKFAKSKKAKVDMQPMFKAATEMKANAVTFQSWNKIWHDTVWGMGGYESNIMAVQRVTHNVRMAAFETNLLDLEEGG----GIPNRTQFRHVIFGPELRSGYDASIFPAIRDSI 701
            +L D W +K          +I+ LG+G+D+  F    G +S    +       +   YP YHS YETY+ + KF DP F+YH  +AQ  G      + S +LPFD + Y              A  K A+           EMKA  ++F S     ++       +   +  + + ++ + +      L+ LE       G+P R  +RH+I+ P   + Y    FP I D++
Sbjct:  494 SLYDSWKEKSPSTEFIGMPRISKLGSGNDFEVFFQRLGIASGRARYTKNWKNNKVSSYPLYHSVYETYELVEKFYDPTFKYHLTVAQVRGAMVFELANSIVLPFDCQSYA------------VALKKHAETIYNISMNHPQEMKAYMISFDSLFSAVNNFTDVASKFNQRLQDLDK-SNPILLRILNDQLMYLERAFIDPLGLPGRPFYRHIIYAPSSHNKYAGESFPGIYDAL 714          
BLAST of FC932487 vs. ExPASy Swiss-Prot
Match: FOLH1_MOUSE (Glutamate carboxypeptidase 2 OS=Mus musculus GN=Folh1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13
Identity = 61/234 (26.07%), Postives = 99/234 (42.31%), Query Frame = 3
Query:   60 TLKDLWDKKGS--------KITPLGAGSDYVAFQDIAGTSSIDFGF-------EGEPYP-YHSCYETYDWMVKFADPDFQYHKILAQFWGXXXXXXSESPMLPFDLEVYGNSIEGWVKDLDKFAKSKKAKVDMQPMFKAATEMKANAVTFQSWNKIWHDTVWGMGGYESNIMAVQRVTHNVRMAAFETNLLDLEEGG----GIPNRTQFRHVIFGPELRSGYDASIFPAIRDSI 701
            +L D W +K          +I+ LG+G+D+  F    G +S    +       +   YP YHS YETY+ +VKF DP F+YH  +AQ         + S +LPFD + Y              A  K A        K   EM+A  ++F S     ++       +   +  + + ++ + +      L+ LE       G+P R  +RH+I+ P   + Y    FP I D++
Sbjct:  494 SLYDSWKEKSPSPEFIGMPRISKLGSGNDFEVFFQRLGIASGRARYTKNWKTNKVSSYPLYHSVYETYELVVKFYDPTFKYHLTVAQVRRAMVFELANSIVLPFDCQSYA------------VALKKYADTIYNISMKHPQEMEAYMISFDSLFSAVNNFTDVASKFNQRLQELDK-SNPILLRIMNDQLMYLERAFIDPLGLPGRPFYRHIIYAPSSHNKYAGESFPGIYDAL 714          
BLAST of FC932487 vs. ExPASy Swiss-Prot
Match: FOLH1_PIG (Glutamate carboxypeptidase 2 OS=Sus scrofa GN=FOLH1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.702e-12
Identity = 56/215 (26.05%), Postives = 92/215 (42.79%), Query Frame = 3
Query:   93 KITPLGAGSDYVAFQDIAGTSSIDFGFEGE-------PYP-YHSCYETYDWMVKFADPDFQYHKILAQFWGXXXXXXSESPMLPFDLEVYGNSIEGWVKDLDKFAKSKKAKVDMQPMFKAATEMKANAVTFQSWNKIWHDTVWGMGGYESNIMAVQRVTHNVRMAAFETNLLDLEEGG----GIPNRTQFRHVIFGPELRSGYDASIFPAIRDSI 701
            +I+ LG+G+D+  F    G +S    +  +        YP YHS YETY+ + KF DP F+YH  +AQ  G      + S + PFD   Y   +  +   L   + +               EMKA +V+F S      +       +   +  + +  + + +      L+ LE       G+P+R  +RHVI+ P   + Y    FP I D++
Sbjct:  512 RISKLGSGNDFEVFFQRLGIASGRARYTKDWVTNKFSSYPLYHSVYETYELVEKFYDPTFKYHLAVAQVRGGIVFELANSVVRPFDCRDYAVVLRNYADKLYNISMNH------------PQEMKAYSVSFDSLFSAVKNFTEIASNFSERVQDLDK-NNPILLRIMNDQLMFLERAFIVPLGLPDRAFYRHVIYAPSSHNKYMGESFPGIYDAL 713          
BLAST of FC932487 vs. ExPASy Swiss-Prot
Match: FOLH1_HUMAN (Glutamate carboxypeptidase 2 OS=Homo sapiens GN=FOLH1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12
Identity = 61/235 (25.96%), Postives = 97/235 (41.28%), Query Frame = 3
Query:   60 TLKDLWDKKGS--------KITPLGAGSDYVAFQDIAGTSS---------IDFGFEGEPYPYHSCYETYDWMVKFADPDFQYHKILAQFWGXXXXXXSESPMLPFDLEVYGNSIEGWVKDLDKFAKSKKAKVDMQPMFKAATEMKANAVTFQSWNKIWHDTVWGMGGYESNIMAVQRVTHNVRMAAFETNLLDLEEGG----GIPNRTQFRHVIFGPELRSGYDASIFPAIRDSI 701
            +L + W KK          +I+ LG+G+D+  F    G +S             F G P  YHS YETY+ + KF DP F+YH  +AQ  G      + S +LPFD   Y   +  +   +   +             K   EMK  +V+F S      +       +   +    + ++ + +      L+ LE       G+P+R  +RHVI+ P   + Y    FP I D++
Sbjct:  492 SLYESWTKKSPSPEFSGMPRISKLGSGNDFEVFFQRLGIASGRARYTKNWETNKFSGYPL-YHSVYETYELVEKFYDPMFKYHLTVAQVRGGMVFELANSIVLPFDCRDYAVVLRKYADKIYSIS------------MKHPQEMKTYSVSFDSLFSAVKNFTEIASKFSERLQDFDK-SNPIVLRMMNDQLMFLERAFIDPLGLPDRPFYRHVIYAPSSHNKYAGESFPGIYDAL 712          
BLAST of FC932487 vs. ExPASy Swiss-Prot
Match: FOH1B_HUMAN (Putative N-acetylated-alpha-linked acidic dipeptidase OS=Homo sapiens GN=FOLH1B PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.027e-11
Identity = 60/235 (25.53%), Postives = 97/235 (41.28%), Query Frame = 3
Query:   60 TLKDLWDKKGS--------KITPLGAGSDYVAFQDIAGTSS---------IDFGFEGEPYPYHSCYETYDWMVKFADPDFQYHKILAQFWGXXXXXXSESPMLPFDLEVYGNSIEGWVKDLDKFAKSKKAKVDMQPMFKAATEMKANAVTFQSWNKIWHDTVWGMGGYESNIMAVQRVTHNVRMAAFETNLLDLEEGG----GIPNRTQFRHVIFGPELRSGYDASIFPAIRDSI 701
            +L + W KK          +I+ LG+G+D+  F    G +S             F G P  YHS YETY+ + KF DP F+YH  +AQ  G      + S +LPFD   Y   +  +   +   +             K   EMK  +++F S      +       +   +    + ++ + +      L+ LE       G+P+R  +RHVI+ P   + Y    FP I D++
Sbjct:  184 SLYESWTKKSPSPEFSGMPRISKLGSGNDFEVFFQRLGIASGRARYTKNWETNKFSGYPL-YHSVYETYELVEKFYDPMFKYHLTVAQVRGGMVFELANSIVLPFDCRDYAVVLRKYADKIYNIS------------MKHPQEMKTYSLSFDSLFSAVKNFTEIASKFSERLQDFDK-SNPILLRMMNDQLMFLERAFIDPLGLPDRPFYRHVIYAPSSHNKYAGESFPGIYDAL 404          
BLAST of FC932487 vs. ExPASy Swiss-Prot
Match: YGV9_SCHPO (Uncharacterized zinc metalloprotease C354.09c OS=Schizosaccharomyces pombe GN=SPBC354.09c PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11
Identity = 47/204 (23.04%), Postives = 94/204 (46.08%), Query Frame = 3
Query:  117 SDYVAFQDIAGTSSIDFGFEGE-----PYPY-HSCYETYDWMVKFADPDFQYHKILAQFWGXXXXXXSESPMLPFDLEVYGNSIEGWVKDLDKFAKSKKAKVDMQPMFKAATEMKANAVTFQSWNKIWHDTVWGMGGYESNIMAVQRVTHNVRMAAFETNLLDLEEGGGIPNRTQFRHVIFGPELRSGYDASIFPAIRDSITQG 710
            SD  +F   AG   ++  FE       P P+  SC +T  W+  F    ++    L + W       +  P++P+DLE   N +   +K + +   +    +D++ + +  +E+  + + F+   + W   +       S     +   +N ++A FE + LD     G+P    ++H+I+GP LR+ + + +FP+I D++  G
Sbjct:  571 SDLTSFLTFAGIPVVNLAFERNEENPTPMPFLGSCEDTVSWIDTFGSEYWENAARLGKIWSYLILFLANDPVVPYDLEDEINGVGEMLKRIPEIPGAN--ALDLRKINEEFSELLESLIRFEDEIREWKSLMMHNSYTVSVKKHPELEGYNAKLARFERSFLD---EAGLPGHEWYKHLIYGPNLRNSH-SQLFPSIFDALLYG 768          
BLAST of FC932487 vs. ExPASy Swiss-Prot
Match: NALD2_MOUSE (N-acetylated-alpha-linked acidic dipeptidase 2 OS=Mus musculus GN=Naalad2 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11
Identity = 59/253 (23.32%), Postives = 104/253 (41.11%), Query Frame = 3
Query:   15 VLQVLSRISDPHANATLKDLWD-----------KKGSKITPLGAGSDYVAFQDIAGTSSIDFGF-------EGEPYP-YHSCYETYDWMVKFADPDFQYHKILAQFWGXXXXXXSESPMLPFDLEVYGNSIEGWVKDLDKFAKS-----KKAKVDMQPMFKAATEMKANAVTFQSWNKIWHDTVWGMGGYESNIMAVQRVTHNVRMAAFETNLLDLEEGGGIPNRTQFRHVIFGPELRSGYDASIFPAIRDSI 701
            V +V   IS P      K L++           K+  +I  LG+GSD+ A+    G +S    +       +   YP YH+ YET++ +  F DP F+    +AQ  G      ++S ++PF+++ Y  +++ +   +   +K      +   V   P+F A       A  F             +   + N     R+ ++ +M      +  L    G+P R  +RH+IF P   + Y    FP I D++
Sbjct:  464 VYKVAREISSPDDGFESKSLYESWLEKDPSPENKECPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVQNFYDPTFKKQLSVAQLRGALVYELADSVVIPFNIQDYAKALKNYAASIFNISKKHDQQLRNHAVSFDPLFSAVKNFSEAASDFHR----------RLTQVDLNNPIAVRIMNDQQMLLERAFIDPL----GLPGRKFYRHIIFAPSSHNKYAGESFPGIYDAM 702          
BLAST of FC932487 vs. ExPASy Swiss-Prot
Match: NALDL_MOUSE (N-acetylated-alpha-linked acidic dipeptidase-like protein OS=Mus musculus GN=Naaladl1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11
Identity = 43/172 (25.00%), Postives = 81/172 (47.09%), Query Frame = 3
Query:    6 ERTVLQVLSRISDPHANA-TLKDLWDKKGSKITP----------LGAGSDYVAFQDIAGTSSIDFGF-------EGEPYP-YHSCYETYDWMVKFADPDFQYHKILAQFWGXXXXXXSESPMLPFDLEVYGNSIEGWVKDLDKF--AKSKKAKVDMQPMFKAATEMKANAVT 458
            +  +      IS P ++  ++ D W +  ++ +P          LGAGSDY AF    G +S+D  +           YP YH+ ++T+D++ KF DP F  H+ +A+  G      S+S  LP ++  Y  +++ +++   +    + +K  + + P+  A    KA A +
Sbjct:  468 QSVIFSATKEISAPGSSGLSIYDNWIRYTNRTSPVYGLVPSLGTLGAGSDYAAFVHFLGITSMDLAYTYDRSKTSARIYPTYHTAFDTFDYVEKFLDPGFSSHQAVARTAGSVLLRLSDSLFLPLNVSDYSETLQSFLQAAQEALGTQLEKQNISLGPLVTAVANFKAAAAS 639          
The following BLAST results are available for this feature:
BLAST of FC932487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
GCP2_ARATH8.671e-1930.08Probable glutamate carboxypeptidase 2 OS=Arabidops... [more]
FOLH1_RAT4.168e-1326.07Glutamate carboxypeptidase 2 OS=Rattus norvegicus ... [more]
FOLH1_MOUSE9.286e-1326.07Glutamate carboxypeptidase 2 OS=Mus musculus GN=Fo... [more]
FOLH1_PIG2.702e-1226.05Glutamate carboxypeptidase 2 OS=Sus scrofa GN=FOLH... [more]
FOLH1_HUMAN6.019e-1225.96Glutamate carboxypeptidase 2 OS=Homo sapiens GN=FO... [more]
FOH1B_HUMAN1.027e-1125.53Putative N-acetylated-alpha-linked acidic dipeptid... [more]
YGV9_SCHPO2.987e-1123.04Uncharacterized zinc metalloprotease C354.09c OS=S... [more]
NALD2_MOUSE2.987e-1123.32N-acetylated-alpha-linked acidic dipeptidase 2 OS=... [more]
NALDL_MOUSE8.691e-1125.00N-acetylated-alpha-linked acidic dipeptidase-like ... [more]
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Properties
Property NameValue
Genbank descriptionC34209B05EF PostHarveN Citrus clementina cDNA clone C34209B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932487 ID=FC932487; Name=FC932487; organism=Citrus clementina; type=EST; length=716bp
TTTTTGAGCGCACCGTGCTGCAAGTTCTGAGTCGTATCTCGGACCCCCAT
GCGAACGCAACACTGAAAGACCTCTGGGATAAGAAGGGCTCAAAGATCAC
CCCACTTGGCGCTGGAAGTGATTATGTTGCGTTCCAGGATATTGCTGGCA
CCTCGAGTATTGATTTCGGATTCGAGGGCGAGCCCTATCCATACCACAGC
TGCTACGAAACGTATGACTGGATGGTTAAATTTGCAGACCCCGATTTCCA
ATACCACAAAATCCTAGCTCAATTTTGGGGACTTCTTCTCCTTGACCTTT
CGGAGAGCCCCATGCTGCCATTTGATTTAGAAGTCTACGGCAATTCCATT
GAGGGATGGGTCAAAGATTTGGACAAATTTGCCAAATCAAAGAAGGCCAA
GGTGGATATGCAACCCATGTTCAAGGCTGCGACCGAAATGAAAGCCAACG
CTGTTACATTCCAGTCCTGGAACAAGATCTGGCACGACACTGTGTGGGGC
ATGGGCGGATATGAAAGCAATATCATGGCAGTCCAGCGGGTGACCCATAA
TGTTCGAATGGCTGCCTTTGAGACAAATTTACTTGACTTGGAAGAAGGCG
GTGGCATCCCCAACCGCACACAATTCCGACACGTCATCTTTGGTCCAGAG
CTGCGGTCCGGCTACGACGCCTCGATCTTCCCTGCTATCCGCGACAGCAT
TACACAGGGAATTGGA
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