FC932495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 7.878e-78 Identity = 134/218 (61.47%), Postives = 170/218 (77.98%), Query Frame = 3 Query: 3 SKISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKRXXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKIS 656 SKI+ G++ LN+DCDMY+NNS++ RDALC +DE++G E AFVQFPQ FDNVT+N+LY + +R+ +VEF G+DG GGP+Y G+GCFHRR+++CGRKY +E + E +S+R KA ASCTYE NTQWGKE+G+KYGCPVEDVITG++IQC+GWKS Y PE+ AFLGV+PT L Q LVQ++RWSEGDFQIML +YSP Y GKIS Sbjct: 297 SKITCGKIILNLDCDMYANNSKSTRDALCILLDEKEGKEIAFVQFPQCFDNVTRNDLYGSMMRVGIDVEFLGLDGNGGPLYIGTGCFHRRDVICGRKYGEE-----EEEEESERIHENLEPEMI-KALASCTYEENTQWGKEMGVKYGCPVEDVITGLTIQCRGWKSAYLNPEKQAFLGVAPTNLHQMLVQQRRWSEGDFQIMLSKYSPVWYGKGKIS 508
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 1.700e-72 Identity = 121/216 (56.02%), Postives = 159/216 (73.61%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKRXXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKIS 656 IS+ V LNVDCDMYSNNS ++RDALCFF+DEE H+ FVQ+PQN++N+TKN +Y NSL + N VE G+D GG +Y G+GCFHRREILCG+K+ K+ K + R + +K+ A+CTYE TQWG EIG+KYGCPVEDVITG++I C+GW+SVY +P+R AF+GV+P TL Q ++Q KRWSEG+F I L +++ + HGKIS Sbjct: 296 ISDSPVILNVDCDMYSNNSDSIRDALCFFLDEEMSHKIGFVQYPQNYNNMTKNNIYGNSLNVINHVEMRGLDSAGGCLYIGTGCFHRREILCGKKFSKDYKEDWGRGIKERGHENIDEIEEKAKSLATCTYELRTQWGNEIGVKYGCPVEDVITGLAIHCRGWESVYMEPQRAAFVGVAPATLAQTILQHKRWSEGNFTIFLSKHNTFLFGHGKIS 511
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 6.918e-66 Identity = 115/217 (53.00%), Postives = 152/217 (70.05%), Query Frame = 3 Query: 3 SKISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKRXXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKI 653 S ISN + +NVDCDMYSNNS+++RDALCFF+DEE+G + FVQ+PQNF+NV N++Y + + + NE++ +DG+GG Y G+GCFHRRE LCGR Y +E K + R + R ++ +CTYE NT WG E G++YGCP+EDV TG+ IQC+GW+SVY P+R FLG++PT+L Q LV KRW+EG QI L RYSP HGKI Sbjct: 308 SVISNSPIIMNVDCDMYSNNSESIRDALCFFLDEEQGQDIGFVQYPQNFENVVHNDIYGHPINVVNELDHPCLDGWGGMCYYGTGCFHRREALCGRIYSQEYKEDWTRV--AGRTEDANELEEMGRSLVTCTYEHNTIWGIEKGVRYGCPLEDVTTGLQIQCRGWRSVYYNPKRKGFLGMTPTSLGQILVLYKRWTEGFLQISLSRYSPFLLGHGKI 522
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2) HSP 1 Score: 243.047 bits (619), Expect = 1.104e-63 Identity = 110/217 (50.69%), Postives = 148/217 (68.20%), Query Frame = 3 Query: 3 SKISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKRXXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKI 653 S IS+ V LNVDCDMYSNNS ++RDALCFF+DEE G + FVQ+PQ F+N+T+N++Y NS + VE G+D GG +Y G+GCFHRREILCGR + K+ K R + + + +CTYE TQWG +IG+KYG P ED+ITG++I C+GW+S + P+R AFLG++P+TL Q ++Q KRWSEG+ I L +Y + HGKI Sbjct: 299 SVISDSPVILNVDCDMYSNNSDSIRDALCFFLDEEMGQKIGFVQYPQIFNNMTQNDIYGNSFNVSYHVEMCGLDSVGGCLYIGTGCFHRREILCGRIFSKDYKENWNRGIKERGKENINEIEEKATSLVTCTYEHRTQWGNDIGVKYGFPAEDIITGLAIHCRGWESAFINPKRAAFLGLAPSTLAQNILQHKRWSEGNLTIFLSKYCSFLFGHGKI 515
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 4.226e-39 Identity = 80/212 (37.74%), Postives = 116/212 (54.72%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKI--ELKRENDSKRXXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARY 638 ++N + L +DCDMYSN+ T ALC+ D + FVQFPQ F ++KN++Y+ + + E+ G DG GP + G+GCF R G + ELK + + A C YE NT WG +IG +YG VED TG + C+GW+SV+C+P+R AF G SP +L+ + Q+KRW+ G ++ + RYSP Y Sbjct: 314 MTNSPIILTLDCDMYSNDPATPVRALCYLTDPKIKTGLGFVQFPQTFQGISKNDIYACAYKRLFEINMIGFDGLMGPNHVGTGCFFNRRGFYGAPSNLILPEIDELKPNRIVDKPINAQDVLALAHRVAGCIYELNTNWGSKIGFRYGSLVEDYYTGYRLHCEGWRSVFCRPKRAAFCGDSPKSLIDVVSQQKRWAIGLLEVAISRYSPITY 525
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.230e-38 Identity = 79/212 (37.26%), Postives = 113/212 (53.30%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKET-KIELKREND-SKRXXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARY 638 ++N + L +DCDMYSNN T ALC+ D + + FVQFPQ F V KN++Y++ L+ ++ G DG GP++ G+GCF R G +IE N + + + A C YE NT WG +IG +YG VED TG + C+GW+S++C P + AF G SP L + Q+ RWS G ++ RY+P Y Sbjct: 285 MTNSPIILTLDCDMYSNNPTTPLHALCYLSDPKINFDLGFVQFPQKFQGVNKNDIYASELKRPFDINTVGFDGLMGPVHMGTGCFFNRRAFYGPPTTLILPEIETFGPNRIADKPIKAQDILALAHDVAGCNYECNTNWGSKIGFRYGSLVEDYFTGFMLHCEGWRSIFCSPTKAAFYGDSPKCLTDVIGQQIRWSVGLLEVAFSRYNPLTY 496
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.029e-37 Identity = 78/212 (36.79%), Postives = 113/212 (53.30%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKI--ELKRENDSKRXXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARY 638 ++N + L +DCDMYSN+ T+ ALC+ D E +VQFPQ F ++KN++Y+ + + G DG GP + G+GCF R G Y ELK + + + A C YE NT WG +IG +YG VED TG + C+GW+SV+C P++ AF G SP L+ + Q+ RW+ G F++ +YSP Y Sbjct: 295 MTNSPIILTLDCDMYSNDPATLVRALCYLTDPEIKSGLGYVQFPQKFLGISKNDIYACENKRLFIINMVGFDGLMGPTHVGTGCFFNRRAFYGPPYMLILPEINELKPYRIADKSIKAQDVLSLAHNVAGCIYEYNTNWGSKIGFRYGSLVEDYYTGFMLHCEGWRSVFCNPKKAAFYGDSPKCLVDLVGQQIRWAVGLFEMSFSKYSPITY 506
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.400e-34 Identity = 79/228 (34.65%), Postives = 113/228 (49.56%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG---------------RKYDK-----ETKIE-LKRENDSKRXXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSP 629 +SN Q +N DCD Y NNSQ +R A+CF +D+ +G AFVQFPQ FDNV + Y N R++ + ++G GP Y G+GC RR L G K+ E+ +E L ++ + + S +++ T WGK +G Y ED++TG I QGW+S+YC E DAF G +P L + L Q RWS G ++ +P Sbjct: 402 LSNAQFIINFDCDHYINNSQALRAAICFMLDQREGDNTAFVQFPQRFDNVDPKDRYGNHNRVFFDGTMLALNGLQGPSYLGTGCMFRRLALYGIDPPHWRQDNITPESSKFGNSILLLESVLEALNQDRFATPSPVNDIFVNELEMVVSASFDKETDWGKGVGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNP 629
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.093e-34 Identity = 79/228 (34.65%), Postives = 112/228 (49.12%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG---------------RKYDK-----ETKIE-LKRENDSKRXXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSP 629 +SN Q +N DCD Y NNSQ R A+CF +D+ +G AFVQFPQ FDNV + Y N R++ + ++G GP Y G+GC RR L G K+ E+ +E L ++ + + S +++ T WGK +G Y ED++TG I QGW+S+YC E DAF G +P L + L Q RWS G ++ +P Sbjct: 402 LSNAQFIINFDCDHYINNSQAFRAAICFMLDQREGDNTAFVQFPQRFDNVDPKDRYGNHNRVFFDGTMLALNGLQGPSYLGTGCMFRRLALYGIDPPHWRQDNITPEASKFGNSILLLESVLEALNQDRFATPSPVNDIFVNELEMVVSASFDKETDWGKGVGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNP 629
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.653e-33 Identity = 87/277 (31.41%), Postives = 123/277 (44.40%), Query Frame = 3 Query: 9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGP----------------------------IYCGS-GCFHRRE---------------ILCGRKYDKETKIELKRENDSKRXXXXXXXXXTSKAFA---------------------SCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAH 644 ++N LN+DCD Y NNS+ VR+A+CF MD + G + +VQFPQ FD + N+ Y+N ++ ++ +G+DG GP I CG CF RR L G + DKE L E + ++ TS SC YE T+WG E+G YG ED++TG + C+GW+S+YC P+R AF G +P L L Q RW+ G +I R+SP Y + Sbjct: 514 LTNAPFMLNLDCDHYVNNSKAVREAMCFLMDPQIGKKVCYVQFPQRFDGIDTNDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFKRQALYGYEPPKGPKRPKMISCGCCPCFGRRRKNKKFSKNDMNGDVAALGGAEGDKE---HLMSEMNFEKTFGQSSIFVTSTLMEEGGVPPSSSPAVLLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLWYGY 787 The following BLAST results are available for this feature:
BLAST of FC932495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932495 ID=FC932495; Name=FC932495; organism=Citrus clementina; type=EST; length=695bpback to top |