FC932495

Overview
NameFC932495
Unique NameFC932495
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 7.878e-78
Identity = 134/218 (61.47%), Postives = 170/218 (77.98%), Query Frame = 3
Query:    3 SKISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKRXXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKIS 656
            SKI+ G++ LN+DCDMY+NNS++ RDALC  +DE++G E AFVQFPQ FDNVT+N+LY + +R+  +VEF G+DG GGP+Y G+GCFHRR+++CGRKY +E     + E +S+R           KA ASCTYE NTQWGKE+G+KYGCPVEDVITG++IQC+GWKS Y  PE+ AFLGV+PT L Q LVQ++RWSEGDFQIML +YSP  Y  GKIS
Sbjct:  297 SKITCGKIILNLDCDMYANNSKSTRDALCILLDEKEGKEIAFVQFPQCFDNVTRNDLYGSMMRVGIDVEFLGLDGNGGPLYIGTGCFHRRDVICGRKYGEE-----EEEEESERIHENLEPEMI-KALASCTYEENTQWGKEMGVKYGCPVEDVITGLTIQCRGWKSAYLNPEKQAFLGVAPTNLHQMLVQQRRWSEGDFQIMLSKYSPVWYGKGKIS 508          
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.700e-72
Identity = 121/216 (56.02%), Postives = 159/216 (73.61%), Query Frame = 3
Query:    9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKRXXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKIS 656
            IS+  V LNVDCDMYSNNS ++RDALCFF+DEE  H+  FVQ+PQN++N+TKN +Y NSL + N VE  G+D  GG +Y G+GCFHRREILCG+K+ K+ K +  R    +           +K+ A+CTYE  TQWG EIG+KYGCPVEDVITG++I C+GW+SVY +P+R AF+GV+P TL Q ++Q KRWSEG+F I L +++   + HGKIS
Sbjct:  296 ISDSPVILNVDCDMYSNNSDSIRDALCFFLDEEMSHKIGFVQYPQNYNNMTKNNIYGNSLNVINHVEMRGLDSAGGCLYIGTGCFHRREILCGKKFSKDYKEDWGRGIKERGHENIDEIEEKAKSLATCTYELRTQWGNEIGVKYGCPVEDVITGLAIHCRGWESVYMEPQRAAFVGVAPATLAQTILQHKRWSEGNFTIFLSKHNTFLFGHGKIS 511          
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.918e-66
Identity = 115/217 (53.00%), Postives = 152/217 (70.05%), Query Frame = 3
Query:    3 SKISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKRXXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKI 653
            S ISN  + +NVDCDMYSNNS+++RDALCFF+DEE+G +  FVQ+PQNF+NV  N++Y + + + NE++   +DG+GG  Y G+GCFHRRE LCGR Y +E K +  R   + R           ++  +CTYE NT WG E G++YGCP+EDV TG+ IQC+GW+SVY  P+R  FLG++PT+L Q LV  KRW+EG  QI L RYSP    HGKI
Sbjct:  308 SVISNSPIIMNVDCDMYSNNSESIRDALCFFLDEEQGQDIGFVQYPQNFENVVHNDIYGHPINVVNELDHPCLDGWGGMCYYGTGCFHRREALCGRIYSQEYKEDWTRV--AGRTEDANELEEMGRSLVTCTYEHNTIWGIEKGVRYGCPLEDVTTGLQIQCRGWRSVYYNPKRKGFLGMTPTSLGQILVLYKRWTEGFLQISLSRYSPFLLGHGKI 522          
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 1.104e-63
Identity = 110/217 (50.69%), Postives = 148/217 (68.20%), Query Frame = 3
Query:    3 SKISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKRXXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKI 653
            S IS+  V LNVDCDMYSNNS ++RDALCFF+DEE G +  FVQ+PQ F+N+T+N++Y NS  +   VE  G+D  GG +Y G+GCFHRREILCGR + K+ K    R    +           + +  +CTYE  TQWG +IG+KYG P ED+ITG++I C+GW+S +  P+R AFLG++P+TL Q ++Q KRWSEG+  I L +Y    + HGKI
Sbjct:  299 SVISDSPVILNVDCDMYSNNSDSIRDALCFFLDEEMGQKIGFVQYPQIFNNMTQNDIYGNSFNVSYHVEMCGLDSVGGCLYIGTGCFHRREILCGRIFSKDYKENWNRGIKERGKENINEIEEKATSLVTCTYEHRTQWGNDIGVKYGFPAEDIITGLAIHCRGWESAFINPKRAAFLGLAPSTLAQNILQHKRWSEGNLTIFLSKYCSFLFGHGKI 515          
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 4.226e-39
Identity = 80/212 (37.74%), Postives = 116/212 (54.72%), Query Frame = 3
Query:    9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKI--ELKRENDSKRXXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARY 638
            ++N  + L +DCDMYSN+  T   ALC+  D +      FVQFPQ F  ++KN++Y+ + +   E+   G DG  GP + G+GCF  R    G   +       ELK      +          +   A C YE NT WG +IG +YG  VED  TG  + C+GW+SV+C+P+R AF G SP +L+  + Q+KRW+ G  ++ + RYSP  Y
Sbjct:  314 MTNSPIILTLDCDMYSNDPATPVRALCYLTDPKIKTGLGFVQFPQTFQGISKNDIYACAYKRLFEINMIGFDGLMGPNHVGTGCFFNRRGFYGAPSNLILPEIDELKPNRIVDKPINAQDVLALAHRVAGCIYELNTNWGSKIGFRYGSLVEDYYTGYRLHCEGWRSVFCRPKRAAFCGDSPKSLIDVVSQQKRWAIGLLEVAISRYSPITY 525          
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.230e-38
Identity = 79/212 (37.26%), Postives = 113/212 (53.30%), Query Frame = 3
Query:    9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKET-KIELKREND-SKRXXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARY 638
            ++N  + L +DCDMYSNN  T   ALC+  D +   +  FVQFPQ F  V KN++Y++ L+   ++   G DG  GP++ G+GCF  R    G        +IE    N  + +          +   A C YE NT WG +IG +YG  VED  TG  + C+GW+S++C P + AF G SP  L   + Q+ RWS G  ++   RY+P  Y
Sbjct:  285 MTNSPIILTLDCDMYSNNPTTPLHALCYLSDPKINFDLGFVQFPQKFQGVNKNDIYASELKRPFDINTVGFDGLMGPVHMGTGCFFNRRAFYGPPTTLILPEIETFGPNRIADKPIKAQDILALAHDVAGCNYECNTNWGSKIGFRYGSLVEDYFTGFMLHCEGWRSIFCSPTKAAFYGDSPKCLTDVIGQQIRWSVGLLEVAFSRYNPLTY 496          
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.029e-37
Identity = 78/212 (36.79%), Postives = 113/212 (53.30%), Query Frame = 3
Query:    9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKI--ELKRENDSKRXXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARY 638
            ++N  + L +DCDMYSN+  T+  ALC+  D E      +VQFPQ F  ++KN++Y+   +    +   G DG  GP + G+GCF  R    G  Y        ELK    + +          +   A C YE NT WG +IG +YG  VED  TG  + C+GW+SV+C P++ AF G SP  L+  + Q+ RW+ G F++   +YSP  Y
Sbjct:  295 MTNSPIILTLDCDMYSNDPATLVRALCYLTDPEIKSGLGYVQFPQKFLGISKNDIYACENKRLFIINMVGFDGLMGPTHVGTGCFFNRRAFYGPPYMLILPEINELKPYRIADKSIKAQDVLSLAHNVAGCIYEYNTNWGSKIGFRYGSLVEDYYTGFMLHCEGWRSVFCNPKKAAFYGDSPKCLVDLVGQQIRWAVGLFEMSFSKYSPITY 506          
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.400e-34
Identity = 79/228 (34.65%), Postives = 113/228 (49.56%), Query Frame = 3
Query:    9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG---------------RKYDK-----ETKIE-LKRENDSKRXXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSP 629
            +SN Q  +N DCD Y NNSQ +R A+CF +D+ +G   AFVQFPQ FDNV   + Y N  R++ +     ++G  GP Y G+GC  RR  L G                K+       E+ +E L ++  +             +   S +++  T WGK +G  Y    ED++TG  I  QGW+S+YC  E DAF G +P  L + L Q  RWS G  ++     +P
Sbjct:  402 LSNAQFIINFDCDHYINNSQALRAAICFMLDQREGDNTAFVQFPQRFDNVDPKDRYGNHNRVFFDGTMLALNGLQGPSYLGTGCMFRRLALYGIDPPHWRQDNITPESSKFGNSILLLESVLEALNQDRFATPSPVNDIFVNELEMVVSASFDKETDWGKGVGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNP 629          
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.093e-34
Identity = 79/228 (34.65%), Postives = 112/228 (49.12%), Query Frame = 3
Query:    9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG---------------RKYDK-----ETKIE-LKRENDSKRXXXXXXXXXTSKAFASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSP 629
            +SN Q  +N DCD Y NNSQ  R A+CF +D+ +G   AFVQFPQ FDNV   + Y N  R++ +     ++G  GP Y G+GC  RR  L G                K+       E+ +E L ++  +             +   S +++  T WGK +G  Y    ED++TG  I  QGW+S+YC  E DAF G +P  L + L Q  RWS G  ++     +P
Sbjct:  402 LSNAQFIINFDCDHYINNSQAFRAAICFMLDQREGDNTAFVQFPQRFDNVDPKDRYGNHNRVFFDGTMLALNGLQGPSYLGTGCMFRRLALYGIDPPHWRQDNITPEASKFGNSILLLESVLEALNQDRFATPSPVNDIFVNELEMVVSASFDKETDWGKGVGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNP 629          
BLAST of FC932495 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.653e-33
Identity = 87/277 (31.41%), Postives = 123/277 (44.40%), Query Frame = 3
Query:    9 ISNGQVTLNVDCDMYSNNSQTVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGP----------------------------IYCGS-GCFHRRE---------------ILCGRKYDKETKIELKRENDSKRXXXXXXXXXTSKAFA---------------------SCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAH 644
            ++N    LN+DCD Y NNS+ VR+A+CF MD + G +  +VQFPQ FD +  N+ Y+N   ++ ++  +G+DG  GP                            I CG   CF RR                 L G + DKE    L  E + ++         TS                         SC YE  T+WG E+G  YG   ED++TG  + C+GW+S+YC P+R AF G +P  L   L Q  RW+ G  +I   R+SP  Y +
Sbjct:  514 LTNAPFMLNLDCDHYVNNSKAVREAMCFLMDPQIGKKVCYVQFPQRFDGIDTNDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFKRQALYGYEPPKGPKRPKMISCGCCPCFGRRRKNKKFSKNDMNGDVAALGGAEGDKE---HLMSEMNFEKTFGQSSIFVTSTLMEEGGVPPSSSPAVLLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLWYGY 787          
The following BLAST results are available for this feature:
BLAST of FC932495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLE1_ARATH7.878e-7861.47Cellulose synthase-like protein E1 OS=Arabidopsis ... [more]
CSLE6_ORYSJ1.700e-7256.02Cellulose synthase-like protein E6 OS=Oryza sativa... [more]
CSLE2_ORYSJ6.918e-6653.00Cellulose synthase-like protein E2 OS=Oryza sativa... [more]
CSLE1_ORYSJ1.104e-6350.69Cellulose synthase-like protein E1 OS=Oryza sativa... [more]
CSLG3_ARATH4.226e-3937.74Cellulose synthase-like protein G3 OS=Arabidopsis ... [more]
CSLG2_ARATH1.230e-3837.26Cellulose synthase-like protein G2 OS=Arabidopsis ... [more]
CSLG1_ARATH3.029e-3736.79Cellulose synthase-like protein G1 OS=Arabidopsis ... [more]
CSLF3_ORYSI2.400e-3434.65Probable mixed-linked glucan synthase 3 OS=Oryza s... [more]
CSLF3_ORYSJ4.093e-3434.65Probable mixed-linked glucan synthase 3 OS=Oryza s... [more]
CESA7_ARATH2.653e-3331.41Cellulose synthase A catalytic subunit 7 [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionC34209C01EF PostHarveN Citrus clementina cDNA clone C34209C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932495 ID=FC932495; Name=FC932495; organism=Citrus clementina; type=EST; length=695bp
CATCAAAGATTAGCAATGGACAAGTCACTCTTAATGTAGACTGTGATATG
TACTCAAACAATTCACAAACTGTGAGAGATGCCCTTTGCTTCTTCATGGA
TGAAGAAAAGGGCCATGAGTTTGCTTTTGTCCAGTTTCCACAGAACTTTG
ATAATGTTACTAAGAATGAATTGTACAGCAACTCATTAAGAATATATAAT
GAGGTGGAATTTGAAGGCATGGATGGTTATGGAGGCCCAATTTATTGTGG
ATCTGGCTGTTTTCACAGAAGAGAAATTCTATGTGGAAGGAAATACGACA
AGGAAACTAAGATTGAATTGAAGAGAGAAAATGATTCAAAGAGAGAAGAA
AGTTTACTTGAATTGGAAGAAACATCGAAGGCTTTTGCAAGTTGTACCTA
TGAAACAAACACTCAATGGGGAAAGGAGATTGGATTGAAATATGGGTGTC
CGGTTGAAGATGTTATAACAGGGATATCGATCCAATGTCAAGGATGGAAA
TCAGTGTATTGCAAACCAGAAAGGGATGCATTCTTAGGTGTTTCACCGAC
CACATTGCTTCAGTTCCTCGTGCAGCGTAAGAGATGGTCTGAAGGTGATT
TCCAAATTATGCTTTGCAGATACAGTCCTGCTAGGTATGCACATGGAAAG
ATTAGCTTAGGCCTTCGCTTGGGATATTGCTGCTATTGTCTCTGG
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