FC932497

Overview
NameFC932497
Unique NameFC932497
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13402 contig Ccv1_Contig13402:2..763. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932497 vs. ExPASy Swiss-Prot
Match: KADC1_ARATH (Probable adenylate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=At2g37250 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.822e-26
Identity = 68/145 (46.90%), Postives = 84/145 (57.93%), Query Frame = 2
Query:  179 HGQASEPMLRLDSAG--LPPRRGVQWVLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAEXXXXXXXXXXXXNFQSTEDQLVKRNL 607
            H  +  P L    A    P  R VQWV +G PGV K  YA  LS LL VPHI+ G LVR+EL+    L ++++  VN+GKLV +++I  LLSKRLE G  RGESGFILDG PRT  QAE            N +  E+ LV + L
Sbjct:   29 HASSPSPFLHGGGASRVAPKDRNVQWVFLGCPGVGKGTYASRLSTLLGVPHIATGDLVREELASSGPLSQKLSEIVNQGKLVSDEIIVDLLSKRLEAGEARGESGFILDGFPRTMRQAEILGDVTDIDLVVNLKLPEEVLVDKCL 173          
BLAST of FC932497 vs. ExPASy Swiss-Prot
Match: KADC_SOLTU (Adenylate kinase, chloroplastic OS=Solanum tuberosum GN=ADK PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.389e-25
Identity = 64/127 (50.39%), Postives = 77/127 (60.63%), Query Frame = 2
Query:  227 PPRRGVQWVLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAEXXXXXXXXXXXXNFQSTEDQLVKRNL 607
            P  + VQWV +G PGV K  YA  LS LL VPHI+ G LVR EL     L KQ+A  VN+GKLV +++I  LLSKRLE G  +GE+GFILDG PRT  QAE            N +  E  LV++ L
Sbjct:   51 PKAKTVQWVFLGCPGVGKGTYASRLSTLLGVPHIATGDLVRDELKSSGPLSKQLAEIVNQGKLVSDEIILNLLSKRLESGEAKGEAGFILDGFPRTVRQAEILTEVTDIDLVVNLKLPERVLVEKCL 177          
BLAST of FC932497 vs. ExPASy Swiss-Prot
Match: KAD_TREDE (Adenylate kinase OS=Treponema denticola GN=adk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 41/117 (35.04%), Postives = 64/117 (54.70%), Query Frame = 2
Query:  251 VLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAEXXXXXXXXXXXXNFQSTEDQLVKR 601
            + +G PG  K   A  +SK  ++PHIS G L R  +  ++ L K++   ++ G LV +D+  AL+ +RLE      + GFILDG PRT  QA+            NF  ++D+++KR
Sbjct:    4 IFLGPPGAGKGTLAFEVSKSYKIPHISTGDLFRAAIKEQTDLGKKVKAVIDSGALVSDDLTIALVKERLERD--DTKKGFILDGFPRTIAQADALEDIVKIDSVINFDISDDEVIKR 118          
BLAST of FC932497 vs. ExPASy Swiss-Prot
Match: KAD_THEM4 (Adenylate kinase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=adk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.673e-13
Identity = 43/122 (35.25%), Postives = 68/122 (55.74%), Query Frame = 2
Query:  251 VLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAE-----XXXXXXXXXXXXNFQSTEDQLVKR 601
            V +G PG  K  YA  L ++L +PHIS G + R+E+S +S L +++ + +  G+LVP+D+   ++ +RL +   +   GFILDG PRT  QA+                  F+ +ED +VKR
Sbjct:    4 VFLGPPGAGKGTYAKELKEILGIPHISTGDMFREEISAKSELGRKVEDILKRGELVPDDLTNVIVKERLSKPDCK--KGFILDGYPRTVAQAKALDEILKKLGRELKFAIYFEVSEDVVVKR 123          
BLAST of FC932497 vs. ExPASy Swiss-Prot
Match: KAD_NATTJ (Adenylate kinase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=adk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.103e-13
Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = 2
Query:  251 VLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAE 529
            +L+G PG  K   A+ LSK L+VPHI+ G + R+ +S  + L K+  + ++ G+LVP+DV+  ++ +RL++       GFILDG PRT  QAE
Sbjct:    4 ILMGPPGAGKGTQAEKLSKELDVPHIATGDIFRKAVSEGTELGKEAKSYMDAGQLVPDDVVIGIVEERLKKP--DCHEGFILDGFPRTVTQAE 94          
BLAST of FC932497 vs. ExPASy Swiss-Prot
Match: KAD_STRCO (Adenylate kinase OS=Streptomyces coelicolor GN=adk PE=3 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 1.041e-12
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 2
Query:  251 VLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAE-----XXXXXXXXXXXXNFQSTEDQLVKR 601
            VL+G PG  K   A  L++ L +PHIS G L R  +S ++ L K   + +N G LVP++V  A+   R+E+     E GF+LDG PR   QAE                 + ++ ED++VKR
Sbjct:    4 VLVGPPGAGKGTQATRLAETLHIPHISTGDLFRANISQQTELGKLAKSYMNAGNLVPDEVTIAMAKDRMEQP--DAEGGFLLDGFPRNVSQAEALDELLETEGMKLDAVLDLEAPEDEVVKR 123          
BLAST of FC932497 vs. ExPASy Swiss-Prot
Match: KAD_CORU7 (Adenylate kinase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=adk PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.776e-12
Identity = 48/124 (38.71%), Postives = 64/124 (51.61%), Query Frame = 2
Query:  251 VLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAE-----XXXXXXXXXXXXNFQSTEDQLVKRNL 607
            VL+G PG  K   A  LS  L +PHIS G L R  +S  + L KQ    ++ GKLVP +V   ++  RLEE      +GF+LDG PRT  QA+                 N+Q +ED +V+R L
Sbjct:    4 VLLGPPGAGKGTQAQLLSDALNIPHISTGDLFRANISQGTELGKQAQEYMDAGKLVPTEVTANMVRARLEEA--DAANGFLLDGFPRTIEQADLLEEMLKEKDLKLDAVINYQVSEDVVVERML 125          
BLAST of FC932497 vs. ExPASy Swiss-Prot
Match: KAD_THEAB (Adenylate kinase OS=Thermosipho africanus (strain TCF52B) GN=adk PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.747e-12
Identity = 36/93 (38.71%), Postives = 57/93 (61.29%), Query Frame = 2
Query:  251 VLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAE 529
            V +G PG  K  YA  L ++L +PHIS G + R+ ++ +S L K++   +  G LVP+D+  +++  RL +   +  +GFILDG PRT  QA+
Sbjct:    4 VFLGPPGAGKGTYAKRLIEMLNIPHISTGDMFREAVASKSELGKKVEEILKRGDLVPDDLTNSIVKDRLSKEDCK--NGFILDGFPRTVAQAK 94          
BLAST of FC932497 vs. ExPASy Swiss-Prot
Match: KAD_CORDI (Adenylate kinase OS=Corynebacterium diphtheriae GN=adk PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.747e-12
Identity = 46/124 (37.10%), Postives = 64/124 (51.61%), Query Frame = 2
Query:  251 VLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAE-----XXXXXXXXXXXXNFQSTEDQLVKRNL 607
            VL+G PG  K   A  LS+ L +PHIS G L R  +   + L K+  + ++ GKLVP DV   ++  RL++     E GF+LDG PRT  QAE                 N++  ED +V+R L
Sbjct:    4 VLLGPPGAGKGTQAAILSEKLRIPHISTGDLFRANIGEGTPLGKEAKSYIDAGKLVPTDVTARMVKARLQKD--DAEVGFLLDGFPRTVEQAEILKEMLKGFGVELNGVINYEVAEDVVVERML 125          
BLAST of FC932497 vs. ExPASy Swiss-Prot
Match: KAD_UNCMA (Adenylate kinase OS=Uncultured methanogenic archaeon RC-I GN=adk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.503e-11
Identity = 39/96 (40.62%), Postives = 60/96 (62.50%), Query Frame = 2
Query:  242 VQWVLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAE 529
            +Q+VL G PG  K   A  LS+ L VPHIS G ++R+ +   +AL  +  + +++G+LVP++++  L+  RL +   R   GF+LDG PRT  QAE
Sbjct:    1 MQFVLFGPPGAGKGTQAKFLSEELNVPHISTGDILRENVKKGTALGLKAKSYMDKGELVPDNLLIDLIKDRLSQPDCR--KGFLLDGFPRTIPQAE 94          
The following BLAST results are available for this feature:
BLAST of FC932497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
KADC1_ARATH2.822e-2646.90Probable adenylate kinase 1, chloroplastic OS=Arab... [more]
KADC_SOLTU2.389e-2550.39Adenylate kinase, chloroplastic OS=Solanum tuberos... [more]
KAD_TREDE1.606e-1335.04Adenylate kinase OS=Treponema denticola GN=adk PE=... [more]
KAD_THEM44.673e-1335.25Adenylate kinase OS=Thermosipho melanesiensis (str... [more]
KAD_NATTJ6.103e-1341.94Adenylate kinase OS=Natranaerobius thermophilus (s... [more]
KAD_STRCO1.041e-1236.07Adenylate kinase OS=Streptomyces coelicolor GN=adk... [more]
KAD_CORU71.776e-1238.71Adenylate kinase OS=Corynebacterium urealyticum (s... [more]
KAD_THEAB6.747e-1238.71Adenylate kinase OS=Thermosipho africanus (strain ... [more]
KAD_CORDI6.747e-1237.10Adenylate kinase OS=Corynebacterium diphtheriae GN... [more]
KAD_UNCMA1.503e-1140.63Adenylate kinase OS=Uncultured methanogenic archae... [more]

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Properties
Property NameValue
Genbank descriptionC34209C04EF PostHarveN Citrus clementina cDNA clone C34209C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932497 ID=FC932497; Name=FC932497; organism=Citrus clementina; type=EST; length=761bp
GAGCTTCTCAACTTTTCCAAAAGCAAAAATATCTTTCGAGCGCCGACACG
CCATGGCCGGACTGAGCCGACTGAGAGCAGCCGCCGCCCTGCAGCTGCGC
CAGCTAGCCAGAAGCCGGGCCTACGGATCGGCGGCTGCGGCTCAGCTGCA
GTACGACTACGACGACGAGTGCGATCTCCACGGACAGGCGAGCGAGCCGA
TGCTGCGGCTCGACTCGGCTGGGTTGCCGCCGAGGAGAGGAGTGCAGTGG
GTGTTAATTGGTGACCCGGGTGTGAAGAAACACGTGTACGCCGATAATCT
GTCGAAACTTCTAGAAGTTCCTCATATCTCAATGGGAAGTCTTGTTAGAC
AAGAGCTTAGCCCTCGATCTGCTCTCTATAAACAGATCGCGAATGCTGTA
AATGAAGGAAAGCTTGTGCCAGAAGATGTAATTTTTGCATTGTTGTCAAA
GAGGCTGGAAGAAGGATACTACAGGGGAGAAAGTGGGTTCATTCTGGATG
GAATTCCTCGGACAAGGATTCAAGCCGAAATTCTTGATCAAATTGTGGAT
GTTGATCTAGTCGTCAATTTTCAGAGCACTGAGGACCAATTGGTTAAAAG
GAATCTAGAAAGTGAAGCCTTTTCTCCTCATAAAGAATTTCTTAGCTTGG
GCGGTGCCAGATTTTCTGCTGCTGATGCAGCCAGTGCCTGGGAAGAGAAG
TCCGTATCTATGCAGAGCAGGGTAGTCATTGGAAGATTATACAGTAACAA
AGGAACTTCTT
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