FC932503

Overview
NameFC932503
Unique NameFC932503
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932503 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 5.562e-82
Identity = 163/258 (63.18%), Postives = 194/258 (75.19%), Query Frame = 2
Query:   17 IRALEDCRLLAGFNMDFLLSSFETVNSTS-----KTLPTMQADDVQTFLSAILTNQQTCFDGLQDTAS---AWSVKNGLSLPLSNDTKLYSVSLALFTKAWVPKKKEAT--AW-QP-------TRKQRLFRNGRLPFKMSEKTRVVYETVSRRKLLQAAPDDE------VLVSDIVTVSQDGSGNFTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYISISKNKKNLMIIGDGINQTVITGNRSVVDGWTTFNSAT 718
            IRAL+DCR LAG  MD+LL+SFETVN TS     K L   +ADD+QT LSA LTN+QTC +GL   AS    W+V+ G++LPL NDTKL  VSLALFTK WVPKKK+    AW QP       T+  RLFRNG LP KM+EKT+ VYE++SRRKL     + +      VL+SDIVTVSQDG+GNFT IT A+  APNNTD + G+FLIY+TAG+YEEYISI+KNK+ +M+IGDGINQTV+TGNRSVVDGWTTFNSAT
Sbjct:   90 IRALQDCRFLAGLTMDYLLTSFETVNDTSAKTSFKPLSFPKADDIQTLLSAALTNEQTCLEGLTTAASYSATWTVRTGVALPLVNDTKLLGVSLALFTKGWVPKKKKRAGFAWAQPRSGSSTHTKPFRLFRNGALPLKMTEKTKAVYESLSRRKLADGDSNGDGDDGSMVLISDIVTVSQDGTGNFTNITAAVAAAPNNTDGSAGFFLIYVTAGIYEEYISIAKNKRYMMMIGDGINQTVVTGNRSVVDGWTTFNSAT 347          
BLAST of FC932503 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 299.671 bits (766), Expect = 1.049e-80
Identity = 157/253 (62.06%), Postives = 196/253 (77.47%), Query Frame = 2
Query:    2 LSTTAIRALEDCRLLAGFNMDFLLSSFETVNST--SKTLPTMQADDVQTFLSAILTNQQTCFDGLQDTASA-WSVKNGLSLPLSNDTKLYSVSLALFTKAWVPKKKEATA---W-------QPTRKQRLFRNGRLPFKMSEKTRVVYETVSRRKLLQAAPD-DEVLVSDIVTVSQDGSGNFTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYISISKNKKNLMIIGDGINQTVITGNRSVVDGWTTFNSAT 718
            LS +A+ AL+DCR LA    D+L++SFETVN T  SKTL   +AD++QT LSA LTN+QTC DG+   AS+ W+++NG++LPL NDTKL+SVSLALFTK WVPKKK+  A   W         T+  R FRNG LP KM+E TR VYE++SRRKL     D + VLVSDIVTV+Q+G+GNFTTIT+A+N APN TD T GYF+IY+T+GVYEE + I+KNK+ LM+IGDGIN+TV+TGNR+VVDGWTTFNSAT
Sbjct:   89 LSQSAVGALQDCRYLASLTTDYLITSFETVNITTSSKTLSFSKADEIQTLLSAALTNEQTCLDGINTAASSSWTIRNGVALPLINDTKLFSVSLALFTKGWVPKKKKQVASYSWAHPKNTHSHTKPFRHFRNGALPLKMTEHTRAVYESLSRRKLADDDNDVNTVLVSDIVTVNQNGTGNFTTITEAVNSAPNKTDGTAGYFVIYVTSGVYEENVVIAKNKRYLMMIGDGINRTVVTGNRNVVDGWTTFNSAT 341          
BLAST of FC932503 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 285.419 bits (729), Expect = 2.047e-76
Identity = 150/240 (62.50%), Postives = 185/240 (77.08%), Query Frame = 2
Query:   11 TAIRALEDCRLLAGFNMDFLLSSFETVNSTSKTLPTMQADDVQTFLSAILTNQQTCFDGLQDTASAWSVKNGLSLPLSNDTKLYSVSLALFTKAWVPKKKEATA-WQPTRKQRLF---RNGRLPFKMSEKTRVVYETVSRRKLLQAAPDDEVLVSDIVTVSQDGSGNFTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYISISKNKKNLMIIGDGINQTVITGNRSVVDGWTTFNSAT 718
            + + ALEDC+ LA   MD+LLSS +T +ST KTL   +A+DV TFLSA +TN+QTC +GL+ TAS    +NGLS  L NDTKLY VSLALF+K WVP+++ +   WQP  + + F   RNG+LP KM+E+ R VY TV+RRKLLQ+  D  V VSDIVTV Q+G+GNFTTI  AI  APN TD +NGYFLIY+TAG+YEEY+ + KNK+ +M+IGDGINQTVITGNRSVVDGWTTFNSAT
Sbjct:   95 STVGALEDCKFLASLTMDYLLSSSQTADST-KTLSLSRAEDVHTFLSAAITNEQTCLEGLKSTAS----ENGLSGDLFNDTKLYGVSLALFSKGWVPRRQRSRPIWQPQARFKKFFGFRNGKLPLKMTERARAVYNTVTRRKLLQSDAD-AVQVSDIVTVIQNGTGNFTTINAAIAAAPNKTDGSNGYFLIYVTAGLYEEYVEVPKNKRYVMMIGDGINQTVITGNRSVVDGWTTFNSAT 328          
BLAST of FC932503 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.929e-38
Identity = 99/249 (39.76%), Postives = 140/249 (56.22%), Query Frame = 2
Query:   17 IRALEDCRLLAGFNMDFLLSSFETVNSTSKTLPTMQA---DDVQTFLSAILTNQQTCFDGLQDTASAWSVKNGLSLPLSNDTKLYSVSLALFTKAWVPKKKEATAWQPTRKQRLFRNGRLPFKMSEKT--RVVYETVSRRKLLQAAPDD----------EVLVSDIVTVSQDGSGNFTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYISISKNKKNLMIIGDGINQTVITGNRSVVDGWTTFNSAT 718
            + A+ DC  LA  ++++L    ETV    K    M A   D V + L  ++TNQQTC DGL D  S ++   G   PL N T+LYSVSL L + A     K         K ++F  G  P +   +T  +V+ +T  + K  + A  +           +LV + VTV    + NF TIT+A+  APN+T    GYF+IY  AG+YEEY+ IS  K+N+M+IGDGIN+T+I+GN S +DGWTT+NS+T
Sbjct:  152 VSAVADCGELAELSVEYL----ETVTEELKAAELMTAALVDRVTSLLGGVVTNQQTCLDGLVDAKSGFATAIGT--PLGNLTRLYSVSLGLVSHALNRNLKRYKG----SKGKIFGGGNKPVREPLETLIKVLRKTCDKGKDCRKANRNLGELGETSGGSILVREAVTVGPYETDNFPTITEAVAAAPNHTFPEQGYFVIYARAGLYEEYVVISNKKRNIMLIGDGINKTIISGNHSFIDGWTTYNSST 390          
BLAST of FC932503 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.434e-37
Identity = 100/249 (40.16%), Postives = 137/249 (55.02%), Query Frame = 2
Query:   17 IRALEDCRLLAGFNMDFLLSSFETVNSTSKTLPTMQA---DDVQTFLSAILTNQQTCFDGLQDTASAWSVKNGLSLPLSNDTKLYSVSLALFTKAWVPKKKEATAWQPTRKQRLFRNGRLPFKMSEKTRV------------VYETVSRRKLLQAAPDDEVLVSDIVTVSQDGSGNFTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYISISKNKKNLMIIGDGINQTVITGNRSVVDGWTTFNSAT 718
            I A+ DC  L+  ++++L    ETV +  KT   M A   + V + LS ++TNQQTC DGL +  S ++   G   P+ N T+LYS+SL L + A     K   A     K ++   G   ++   +T +              +T      L       +LVS  V V    S NFTTITDAI  APNNT   +GYF+IY   GVYEEYI +  NKKNLM++GDGIN+T+ITGN +VVDGWTT+N ++
Sbjct:  147 IGAVADCGELSELSVNYL----ETVTTELKTAQVMTAALVEHVNSLLSGVVTNQQTCLDGLVEAKSGFAAAIGS--PMGNLTRLYSISLGLVSHALNRNLKRFKA----SKGKILGGGNSTYREPLETLIKGLRKTCDNDKDCRKTSRNLGELGETSGGSILVSKAVIVGPFKSDNFTTITDAIAAAPNNTRPEDGYFVIYAREGVYEEYIVVPINKKNLMLMGDGINKTIITGNHNVVDGWTTYNCSS 385          
BLAST of FC932503 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.139e-26
Identity = 93/234 (39.74%), Postives = 123/234 (52.56%), Query Frame = 2
Query:   23 ALEDCRLLAGFNMDFLLSSFE-TVNSTSKTLPTMQ-ADDVQTFLSAILTNQQTCFDGLQDTASAWSVKNGLSLPLSNDTKLYSVSLALFTKAWVPKKKEATAWQPTRKQRLFRNGRLPFKMSEKTRVVYETVSRRKLLQAAPDDEVLVSDIVTVSQDGSGNFTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYISISKNKKNLMIIGDGINQTVITGNRSVVDGWTTFNSAT 718
            A+ DC  L  F+ D L  S   + N   K   T + + D++T+LSA L NQ TC +G + T S   V+  +S  L   T L    L              T   P   Q+   NG++P  +  K R         KLLQA   D V V  IV  +QDG+GNFT +TDA+  AP   D +   ++IYI  G Y+E + I K K NLM+IGDG++ T+I+GNRS VDGWTTF SAT
Sbjct:   89 AISDCLDLLDFSADELNWSLSASQNQKGKNNSTGKLSSDLRTWLSAALVNQDTCSNGFEGTNSI--VQGLISAGLGQVTSLVQELL--------------TQVHPNSNQQ-GPNGQIPSWVKTKDR---------KLLQA---DGVSVDAIV--AQDGTGNFTNVTDAVLAAP---DYSMRRYVIYIKRGTYKENVEIKKKKWNLMMIGDGMDATIISGNRSFVDGWTTFRSAT 288          
BLAST of FC932503 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.383e-26
Identity = 85/237 (35.86%), Postives = 125/237 (52.74%), Query Frame = 2
Query:   23 ALEDCRLL---AGFNMDFLLSSFETVNSTSKTLPTMQADDVQTFLSAILTNQQTCFDGLQDTASAWS--VKNGLSLPLSNDTKLYSVSLALFTKAWVPKKKEATAWQPTRKQRLFRNGRLPFKMSEKTRVVYETVSRRKLLQAAPDDEVLVSDIVTVSQDGSGNFTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYISISKNKKNLMIIGDGINQTVITGNRSVVDGWTTFNSAT 718
            A+ DC  L   A   + +++S+ ++ N    +   +   D++T++SA L+NQ TC DG + T       V  GLS      T + ++   + +    PK K   A   T+    F       K  +           RKLLQ    D + V+D V V+ DG+GNFTTI+DA+  AP   D +   ++I++  GVY E + I K K N+M++GDGI+ TVITGNRS +DGWTTF SAT
Sbjct:   80 AIVDCVDLLDSAAEELSWIISASQSPNGKDNSTGDV-GSDLRTWISAALSNQDTCLDGFEGTNGIIKKIVAGGLS---KVGTTVRNLLTMVHSPPSKPKPKPIKAQTMTKAHSGFSKFPSWVKPGD-----------RKLLQT---DNITVADAV-VAADGTGNFTTISDAVLAAP---DYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGIDATVITGNRSFIDGWTTFRSAT 294          
BLAST of FC932503 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.392e-24
Identity = 74/229 (32.31%), Postives = 125/229 (54.59%), Query Frame = 2
Query:   32 DCRLLAGFNMDFLLSSFETVNSTSKTLPTMQADDVQTFLSAILTNQQTCFDGLQDTASAWSVKNGLSLPLSNDTKLYSVSLALFTKAWVPKKKEATAWQPTRKQRLFRNGRLPFKMSEKTRVVYETVSRRKLLQAAPDDEVLVSDIVTVSQDGSGNFTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYISISKNKKNLMIIGDGINQTVITGNRSVVDGWTTFNSAT 718
            DC  +   + D ++SS E +   +  L +    +V T+LS++LTN  TC + + D +   + K  +   L +      V+LA+F    +P + +          ++  + R P  +         T   RKLL+++P    + +++V V++DG+G F T+ +A+  AP N+   N  ++IY+  GVY+E I I K KKNLM++GDG + T+ITG+ +V+DG TTF SAT
Sbjct:  125 DCEEMMDVSKDRMMSSMEELRGGNYNLESYS--NVHTWLSSVLTNYMTCLESISDVSV--NSKQIVKPQLEDLVSRARVALAIFVSV-LPARDDL---------KMIISNRFPSWL---------TALDRKLLESSPKTLKVTANVV-VAKDGTGKFKTVNEAVAAAPENS---NTRYVIYVKKGVYKETIDIGKKKKNLMLVGDGKDATIITGSLNVIDGSTTFRSAT 326          
BLAST of FC932503 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.375e-24
Identity = 84/237 (35.44%), Postives = 125/237 (52.74%), Query Frame = 2
Query:   23 ALEDCRLLAGFNMDFLLSSFETVNSTSKTLPTMQADDVQTFLSAILTNQQTCFDGLQDTASAWSVKNGLSLPLSNDTKLYSVSLALFTKAWVPKKKEATAWQP---TRKQRLFRNGRLPFKMSEKTRVVYETVSRRKLLQAAPD--DEVLVSDIVTVSQDGSGNFTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYISISKNKKNLMIIGDGINQTVITGNRSVVDGWTTFNSAT 718
            +L+DC+ L      FL  S   +        + +  D + +LSA LTN+ TC +GL+  +    +K  L    +   K  S SL+      +PK++  T  +    T+ +RL   G  P  + +K           + L+ + D  DE   S+ + V+ DG+GNF+TI +AI+ APN   ++N   LIY+  GVY+E I I   K N+++IGDG + T ITGNRSV DGWTTF SAT
Sbjct:  104 SLQDCKDLHHITSSFLKRSISKIQDGVND--SRKLADARAYLSAALTNKITCLEGLESASGP--LKPKLVTSFTTTYKHISNSLSA-----LPKQRRTTNPKTGGNTKNRRLL--GLFPDWVYKKDH---------RFLEDSSDGYDEYDPSESLVVAADGTGNFSTINEAISFAPN---MSNDRVLIYVKEGVYDENIDIPIYKTNIVLIGDGSDVTFITGNRSVGDGWTTFRSAT 317          
BLAST of FC932503 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.539e-23
Identity = 90/240 (37.50%), Postives = 123/240 (51.25%), Query Frame = 2
Query:   23 ALEDCRLLAGFNMDFLL-SSFETVNSTSKTLPTMQA-DDVQTFLSAILTNQQTCFDGLQDTASAWSVKNGLSLPLSNDTKLYSVSLALFTKAWVPKKKEATAWQ-PTRKQRLFRNGRLPFKMSEKTRVVYETVSRRKLLQAAPDDEVLVSDI-----VTVSQDGSGNFTTITDAINVAPNNTDVTNGYFLIYITAGVYEEYISISKNKKNLMIIGDGINQTVITGNRSVVDGWTTFNSAT 718
            A+ DC  L  F+ + L  S+  + N   K   T     D +T+LSA L+NQ TC +G   T+    VK   SL   +  +LYS+   L       +K +A +   P  K      GR       K R   E  S +      PDD  L+        V+V+ DG+GNFT I DAI  AP   D ++  F+IYI  G+Y E + I K K N++++GDGI+ TVI+GNRS +DGWTTF SAT
Sbjct:   68 AVSDCLDLLDFSSEELTWSASASENPKGKGNGTGDVGSDTRTWLSAALSNQATCMEGFDGTSGL--VK---SLVAGSLDQLYSMLRELLPLVQPEQKPKAVSKPGPIAKGPKAPPGR-------KLRDTDEDESLQFPDWVRPDDRKLLESNGRTYDVSVALDGTGNFTKIMDAIKKAP---DYSSTRFVIYIKKGLYLENVEIKKKKWNIVMLGDGIDVTVISGNRSFIDGWTTFRSAT 292          
The following BLAST results are available for this feature:
BLAST of FC932503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
PME7_ARATH5.562e-8263.18Probable pectinesterase/pectinesterase inhibitor 7... [more]
PME41_ARATH1.049e-8062.06Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME20_ARATH2.047e-7662.50Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME47_ARATH4.929e-3839.76Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME25_ARATH1.434e-3740.16Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME_PRUPE1.139e-2639.74Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME32_ARATH7.383e-2635.86Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME18_ARATH1.392e-2432.31Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME12_ARATH2.375e-2435.44Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME44_ARATH1.539e-2337.50Probable pectinesterase/pectinesterase inhibitor 4... [more]

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Properties
Property NameValue
Genbank descriptionC34209C10EF PostHarveN Citrus clementina cDNA clone C34209C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932503 ID=FC932503; Name=FC932503; organism=Citrus clementina; type=EST; length=719bp
ATTATCAACTACTGCCATACGTGCTCTAGAGGATTGCCGTTTACTAGCTG
GTTTCAACATGGACTTTCTTTTAAGCTCCTTTGAAACTGTCAATTCTACT
AGTAAAACTTTACCCACCATGCAAGCGGATGACGTGCAGACTTTCCTTAG
TGCCATTCTAACAAACCAGCAAACCTGTTTTGATGGCTTACAAGACACGG
CTTCCGCTTGGAGCGTCAAGAATGGTCTCTCACTCCCTCTTTCCAACGAC
ACAAAACTCTACAGTGTGTCTCTTGCTCTTTTCACAAAAGCTTGGGTCCC
TAAGAAGAAGGAAGCAACCGCATGGCAGCCCACAAGGAAGCAACGTCTGT
TCCGGAACGGACGGCTACCGTTTAAAATGTCTGAAAAAACACGTGTAGTT
TATGAGACTGTAAGCAGAAGAAAACTTCTCCAAGCTGCTCCGGATGATGA
AGTCTTGGTGAGCGATATTGTCACGGTGAGTCAAGACGGGAGCGGGAATT
TCACTACCATCACTGATGCTATTAATGTTGCTCCAAACAATACAGATGTT
ACCAATGGATACTTCTTGATTTATATCACGGCGGGTGTTTACGAGGAATA
TATATCCATTTCTAAGAACAAGAAAAATTTGATGATCATTGGAGACGGCA
TCAACCAGACAGTAATCACTGGCAACAGAAGCGTTGTTGATGGATGGACT
ACGTTCAATTCTGCGACTT
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