FC932511

Overview
NameFC932511
Unique NameFC932511
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932511 vs. ExPASy Swiss-Prot
Match: MA2B1_CAVPO (Lysosomal alpha-mannosidase OS=Cavia porcellus GN=MAN2B1 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.415e-42
Identity = 80/139 (57.55%), Postives = 101/139 (72.66%), Query Frame = 3
Query:    3 FNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDE 419
            F +W  QV RLY  + H E+E+T+GPIP  D  GKE+ISR    + T  VF+TDSNGR+ L+R RDYR  W L   EPVAGNYYP+N  I+ITD K + +VL DR+ GG+S+ DG +E+M+HRR+L DDGRGVGEAL E
Sbjct:  687 FTAWCSQVVRLYSGQRHLELEWTVGPIPVGDKWGKEIISRFDTPLETGGVFFTDSNGREVLERRRDYRPSWKLNQTEPVAGNYYPVNSRIYITDGKMQLTVLTDRSQGGSSMSDGSLELMVHRRLLKDDGRGVGEALQE 825          
BLAST of FC932511 vs. ExPASy Swiss-Prot
Match: MA2B1_BOVIN (Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B1 PE=1 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 7.767e-41
Identity = 83/159 (52.20%), Postives = 107/159 (67.30%), Query Frame = 3
Query:    3 FNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTCWT*VRGK 479
            F++W  QV RLY  + H E+E+T+GPIP  D  GKEVISR    + T  +FYTDSNGR+ L+R R+YR  W L   EPVAGNYYP+N  I+ITD   + +VL DR+ GG+S++DG +E+M+HRR+L DD RGVGE L        N EG   W  VRG+
Sbjct:  682 FSAWCSQVVRLYPRQRHLELEWTVGPIPVGDGWGKEVISRFDTALATRGLFYTDSNGREILERRRNYRPTWKLNQTEPVAGNYYPVNSRIYITDGNMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDARGVGEPL--------NKEGSGLW--VRGR 830          
BLAST of FC932511 vs. ExPASy Swiss-Prot
Match: MA2B1_FELCA (Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2B1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.014e-40
Identity = 83/159 (52.20%), Postives = 109/159 (68.55%), Query Frame = 3
Query:    3 FNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDESVCVRDNCEGLTCWT*VRGK 479
            F++W  QV RLY  + H E+E+T+GPIP  D  GKE+ISR    + T+ +FYTDSNGR+ L+R RDYR  W L   E VAGNYYP+N  I+I D   + +VL DR+ GG+S++DG +E+M+HRR+L DDGRGVGEAL E        +GL  W  VRG+
Sbjct:  691 FSAWCSQVVRLYRGQRHLELEWTVGPIPVGDGWGKEIISRFDTVLETKGLFYTDSNGREILERRRDYRPTWKLNQTETVAGNYYPVNSRIYIRDGNMQLTVLTDRSQGGSSLRDGSMELMVHRRLLKDDGRGVGEALLE--------DGLGRW--VRGR 839          
BLAST of FC932511 vs. ExPASy Swiss-Prot
Match: MA2B1_HUMAN (Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN2B1 PE=1 SV=3)

HSP 1 Score: 166.007 bits (419), Expect = 1.730e-40
Identity = 77/140 (55.00%), Postives = 102/140 (72.86%), Query Frame = 3
Query:    3 FNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDES 422
            F++W  QV RLY  + H E+E+++GPIP  D+ GKEVISR    + T+  FYTDSNGR+ L+R RDYR  W L   EPVAGNYYP+N  I+ITD   + +VL DR+ GG+S++DG +E+M+HRR+L DDGRGV E L E+
Sbjct:  693 FSAWCSQVVRLYPGQRHLELEWSVGPIPVGDTWGKEVISRFDTPLETKGRFYTDSNGREILERRRDYRPTWKLNQTEPVAGNYYPVNTRIYITDGNMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDGRGVSEPLMEN 832          
BLAST of FC932511 vs. ExPASy Swiss-Prot
Match: MA2B1_MACFA (Lysosomal alpha-mannosidase OS=Macaca fascicularis GN=MAN2B1 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.952e-40
Identity = 77/140 (55.00%), Postives = 102/140 (72.86%), Query Frame = 3
Query:    3 FNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDES 422
            F++W  QV RLY  + H E+E+++GPIP  D+ GKEVISR    + T+  FYTDSNGR+ L+R RDYR  W L   EPVAGNYYP+N  I+ITD K + +VL DR+ GG+S++DG +E+M+HRR+L DD RGV E L E+
Sbjct:  694 FSAWCSQVVRLYPGRRHLELEWSVGPIPVGDTWGKEVISRFDTPLETKGRFYTDSNGREILERRRDYRPTWKLNQTEPVAGNYYPVNTRIYITDGKMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDERGVSEPLMEN 833          
BLAST of FC932511 vs. ExPASy Swiss-Prot
Match: MA2B1_MOUSE (Lysosomal alpha-mannosidase OS=Mus musculus GN=Man2b1 PE=2 SV=3)

HSP 1 Score: 164.081 bits (414), Expect = 6.575e-40
Identity = 77/140 (55.00%), Postives = 101/140 (72.14%), Query Frame = 3
Query:    3 FNSWIYQVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDES 422
            F++W  QV RLY  + H E+E+T+GPIP  D  GKEVISR    M T+  F+TDSNGR+ LKR  DYR  W+L   EPVAGNYYP+N  I+ITD + + +VL DR+ GG+S++DG +E+M+HRR+L DD RGV E L E+
Sbjct:  694 FSAWCSQVIRLYKGQRHLELEWTVGPIPVRDDWGKEVISRFDTPMKTKGQFFTDSNGREILKRRDDYRPTWTLNQTEPVAGNYYPVNTRIYITDGQMQLTVLTDRSQGGSSLQDGSLELMVHRRLLVDDDRGVSEPLLET 833          
BLAST of FC932511 vs. ExPASy Swiss-Prot
Match: MANA_DICDI (Lysosomal alpha-mannosidase OS=Dictyostelium discoideum GN=manA PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.328e-32
Identity = 63/136 (46.32%), Postives = 96/136 (70.59%), Query Frame = 3
Query:   21 QVTRLYIDKEHAEVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITD--KKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEALDES 422
            Q  RLY + +H EVE  IGPI   D +GKE++SR T  +VT++ +Y+DS G +  KR+ +YR  W+L V +P +GNY P+N   +I D  +  +F+++ DR+ G AS++DGQ+++M+HRR L DDGRGVG+ ++ES
Sbjct:  695 QTFRLYSNADHLEVEEIIGPIDISDGIGKEIVSRYTTTLVTDQTWYSDSQGMEMQKRITNYRPSWNLTVVQPTSGNYVPVNAIAYIQDPNQSLQFTIVTDRSRGCASLRDGQLDMMMHRRTLKDDGRGVGQPMNES 830          
BLAST of FC932511 vs. ExPASy Swiss-Prot
Match: MAN2_DROME (Alpha-mannosidase 2 OS=Drosophila melanogaster GN=alpha-Man-II PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 36/102 (35.29%), Postives = 61/102 (59.80%), Query Frame = 3
Query:  108 EVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRMLADDGRGVGEAL 413
            E++ R+  ++ +  +FYTD NG  F+KR R  +         P+  NYYP+  G+FI D  +  ++L  +  GG+S+  G++EIM  RR+ +DD RG+G+ +
Sbjct:  852 EIVMRLETHIDSGDIFYTDLNGLQFIKRRRLDKL--------PLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGV 945          
BLAST of FC932511 vs. ExPASy Swiss-Prot
Match: MA2B2_PONAB (Epididymis-specific alpha-mannosidase OS=Pongo abelii GN=MAN2B2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11
Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = 3
Query:   57 EVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRM 377
            E EY  GP+     + +E + R + N+ +++V Y+D+NG    +R       +   VN  +A NYYP+    F+ D KS   +L +RA G +S  +GQVE+MLHRR+
Sbjct:  701 EQEYQAGPL----ELNREAVLRTSTNLNSQQVIYSDNNGYQMQRR------PYVSYVNNSIARNYYPMVQSAFMEDGKSRLVLLSERAHGISSQGNGQVEVMLHRRL 797          
BLAST of FC932511 vs. ExPASy Swiss-Prot
Match: MA2B2_HUMAN (Epididymis-specific alpha-mannosidase OS=Homo sapiens GN=MAN2B2 PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11
Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = 3
Query:   57 EVEYTIGPIPTEDSVGKEVISRMTANMVTEKVFYTDSNGRDFLKRVRDYRADWSLQVNEPVAGNYYPLNLGIFITDKKSEFSVLVDRATGGASIKDGQVEIMLHRRM 377
            E EY  GP+     + +E + R + N+ +++V Y+D+NG    +R       +   VN  +A NYYP+    F+ D KS   +L +RA G +S  +GQVE+MLHRR+
Sbjct:  701 EQEYQAGPL----ELNREAVLRTSTNLNSQQVIYSDNNGYQMQRR------PYVSYVNNSIARNYYPMVQSAFMEDGKSRLVLLSERAHGISSQGNGQVEVMLHRRL 797          
The following BLAST results are available for this feature:
BLAST of FC932511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MA2B1_CAVPO2.415e-4257.55Lysosomal alpha-mannosidase OS=Cavia porcellus GN=... [more]
MA2B1_BOVIN7.767e-4152.20Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B... [more]
MA2B1_FELCA1.014e-4052.20Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2... [more]
MA2B1_HUMAN1.730e-4055.00Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN... [more]
MA2B1_MACFA2.952e-4055.00Lysosomal alpha-mannosidase OS=Macaca fascicularis... [more]
MA2B1_MOUSE6.575e-4055.00Lysosomal alpha-mannosidase OS=Mus musculus GN=Man... [more]
MANA_DICDI1.328e-3246.32Lysosomal alpha-mannosidase OS=Dictyostelium disco... [more]
MAN2_DROME5.246e-1335.29Alpha-mannosidase 2 OS=Drosophila melanogaster GN=... [more]
MA2B2_PONAB1.292e-1136.45Epididymis-specific alpha-mannosidase OS=Pongo abe... [more]
MA2B2_HUMAN1.292e-1136.45Epididymis-specific alpha-mannosidase OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionC34209D06EF PostHarveN Citrus clementina cDNA clone C34209D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932511 ID=FC932511; Name=FC932511; organism=Citrus clementina; type=EST; length=698bp
AATTTAATTCATGGATCTACCAGGTCACAAGACTTTACATCGACAAAGAG
CATGCTGAAGTAGAGTACACAATTGGGCCAATTCCAACAGAAGATAGTGT
TGGGAAAGAGGTAATATCACGGATGACAGCCAACATGGTCACAGAAAAGG
TCTTTTATACTGATTCGAACGGAAGGGACTTCCTAAAGCGGGTCCGAGAC
TACAGAGCTGACTGGTCCCTCCAAGTTAATGAACCAGTAGCAGGGAACTA
CTATCCACTTAATCTTGGAATTTTCATTACGGATAAGAAATCTGAATTCT
CAGTCTTAGTTGATCGTGCTACTGGAGGAGCCAGCATTAAAGATGGACAA
GTAGAGATAATGCTTCATAGGCGTATGCTTGCTGATGATGGCAGGGGAGT
TGGAGAAGCCCTTGATGAAAGTGTTTGTGTTCGAGATAATTGTGAAGGAC
TAACGTGTTGGACTTAGGTTAGGGGCAAGATACGATTCAACGATCAAGCA
TCAATGTTCTTCTCAGTTTTGGATTCTTTCCTCATCTGGAAGTTATTTTT
ATTCTTGCGTCAGATTAGAGGAAATTATTATTTGAGCGTCAATCAACTAG
GGGCTGGAGCACGCTGGCGGCGAACAACTGGCCAAGAAGTTTATTCACCA
CTTCTCTTGGCTTTCACACNAGAGAAGTTAGAGACTTGGACAGAATCT
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