FC932518
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932518 vs. ExPASy Swiss-Prot
Match: SBP_ARATH (Putative selenium-binding protein OS=Arabidopsis thaliana GN=At4g14030 PE=2 SV=1) HSP 1 Score: 345.895 bits (886), Expect = 1.389e-94 Identity = 167/245 (68.16%), Postives = 201/245 (82.04%), Query Frame = 1 Query: 28 MATDT-VVAEHRSSNNGH-GCCAKG-PGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSEFNVKGRWEKPGHSPAFGYDFWYHLDTKHDQLI---MGSTLAFTKA-STSHVSDGLMGA 741 MAT+T VVA SN G GCC G PGYATPL AMSGP EKL+YVT +YTGTG +KPDYLATVD DPSS SYS VIHRLP+P++GDELHHSGWNSCSSC+GD+S RR+LVLPSL+SGRIY +DT++NPRAPSL+K V+P +I KTGL++PHTAHCLA+G+ILVSCLGD++GNA+GNGFLLLDS+FN+K RWEKPGHSP +GYDFWY +H +I G+ AF+K + HV+DGL G+ Sbjct: 1 MATETEVVAPVTVSNGGSKGCCKYGGPGYATPLAAMSGPSEKLIYVTAVYTGTGIDKPDYLATVDVDPSSPSYSSVIHRLPMPFVGDELHHSGWNSCSSCHGDASVDRRYLVLPSLISGRIYAIDTKENPRAPSLYKYVDPKEIADKTGLAFPHTAHCLATGEILVSCLGDEEGNAKGNGFLLLDSDFNIKNRWEKPGHSPLYGYDFWY--QPRHKTMISTSWGAPKAFSKGFNLQHVADGLYGS 243
BLAST of FC932518 vs. ExPASy Swiss-Prot
Match: SBP1_RAT (Selenium-binding protein 1 OS=Rattus norvegicus GN=Selenbp1 PE=1 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.309e-68 Identity = 126/227 (55.51%), Postives = 159/227 (70.04%), Query Frame = 1 Query: 82 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYHLDTKHDQLIMGSTLA---FTKA-STSHVSDGLMGASV 747 C GPGYATPL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S YS+VIHRLP+P++ DELHHSGWN+CSSC+GDS+ R L+LPS++S RIYVVD PRAP LHKV+EP +I K L HT+HCLASG++++S LGD GN +G GF+LLD E F VKG WEKPG GYDFWY +H+ ++ A F + +HV GL G+ + Sbjct: 5 CTKCGPGYATPLEAMKGPREEIVYLPCIYRNTGIEAPDYLATVDVDPKSPHYSQVIHRLPMPHLKDELHHSGWNTCSSCFGDSTKSRDKLILPSIISSRIYVVDVGSEPRAPKLHKVIEPNEIHAKCNLGNLHTSHCLASGEVMISSLGDPQGNGKG-GFVLLDGETFEVKGTWEKPGGEAPMGYDFWY--QPRHNIMVSTEWAAPNVFKDGFNPAHVEAGLYGSHI 228
BLAST of FC932518 vs. ExPASy Swiss-Prot
Match: SBP1_MOUSE (Selenium-binding protein 1 OS=Mus musculus GN=Selenbp1 PE=1 SV=2) HSP 1 Score: 259.61 bits (662), Expect = 1.309e-68 Identity = 125/227 (55.07%), Postives = 160/227 (70.48%), Query Frame = 1 Query: 82 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYHLDTKHDQLIMGSTLA---FTKA-STSHVSDGLMGASV 747 C GPGY+TPL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S YS+VIHRLP+PY+ DELHHSGWN+CSSC+GDS+ R L+LP L+S RIYVVD PRAP LHKV+E ++I K +S HT+HCLASG+++VS LGD GN +G+ F+LLD E F VKG WEKPG + GYDFWY +H+ ++ A F + +HV GL G+ + Sbjct: 5 CTKCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDELHHSGWNTCSSCFGDSTKSRNKLILPGLISSRIYVVDVGSEPRAPKLHKVIEASEIQAKCNVSSLHTSHCLASGEVMVSTLGDLQGNGKGS-FVLLDGETFEVKGTWEKPGDAAPMGYDFWY--QPRHNVMVSTEWAAPNVFKDGFNPAHVEAGLYGSRI 228
BLAST of FC932518 vs. ExPASy Swiss-Prot
Match: SBP1A_XENLA (Selenium-binding protein 1-A OS=Xenopus laevis GN=selenbp1-A PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.309e-68 Identity = 121/199 (60.80%), Postives = 148/199 (74.37%), Query Frame = 1 Query: 82 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYHLDTKHDQLI 675 C + GPGY +PLDAM GPRE+++Y+ C+Y TG KPDYLATVD DP S SYS+VIHRLP+P + DELHHSGWN+CSSCYGDSS R L+LP L+S RIYVVD +PRAP +HK VEP ++ K GL+ PHT+HCL G+I++S LGD GN +G GF+LLD E F VKG WE G S FGYDFWY +H+ +I Sbjct: 4 CGSCGPGYKSPLDAMKGPREEIVYLPCIYRSTGINKPDYLATVDVDPKSPSYSQVIHRLPMPNVNDELHHSGWNTCSSCYGDSSKVRNKLILPCLISSRIYVVDVGSDPRAPRIHKTVEPYEVFWKCGLANPHTSHCLGCGEIMISSLGDPCGNGKG-GFVLLDGETFEVKGNWEVEGESAQFGYDFWY--QPRHNVMI 199
BLAST of FC932518 vs. ExPASy Swiss-Prot
Match: SBP2_MOUSE (Selenium-binding protein 2 OS=Mus musculus GN=Selenbp2 PE=1 SV=2) HSP 1 Score: 258.07 bits (658), Expect = 3.808e-68 Identity = 124/227 (54.63%), Postives = 159/227 (70.04%), Query Frame = 1 Query: 82 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYHLDTKHDQLIMGSTLA---FTKA-STSHVSDGLMGASV 747 C GPGY TPL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S YS+VIHRLP+PY+ DELHHSGWN+CSSC+GDS+ R L+LP L+S RIYVVD PRAP LHKV+E ++I K +S HT+HCLASG+++V+ LGD GN +G+ F+LLD E F VKG WEKPG + GYDFWY +H+ ++ A F + +HV GL G+ + Sbjct: 5 CTKCGPGYPTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDELHHSGWNTCSSCFGDSTKSRNKLILPGLISSRIYVVDVGSEPRAPKLHKVIEASEIQAKCNVSNTHTSHCLASGEVMVNTLGDLQGNGKGS-FVLLDGETFEVKGTWEKPGGASPMGYDFWY--QPRHNVMVSTEWAAPNVFKDGFNPAHVEAGLYGSRI 228
BLAST of FC932518 vs. ExPASy Swiss-Prot
Match: SBP1_HUMAN (Selenium-binding protein 1 OS=Homo sapiens GN=SELENBP1 PE=1 SV=2) HSP 1 Score: 257.299 bits (656), Expect = 6.495e-68 Identity = 120/199 (60.30%), Postives = 149/199 (74.87%), Query Frame = 1 Query: 82 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYHLDTKHDQLI 675 C GPGY+TPL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S Y +VIHRLP+P + DELHHSGWN+CSSC+GDS+ R LVLPSL+S RIYVVD PRAP LHKV+EP DI K L++ HT+HCLASG++++S LGD GN +G GF+LLD E F VKG WE+PG + GYDFWY +H+ +I Sbjct: 5 CGNCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKG-GFVLLDGETFEVKGTWERPGGAAPLGYDFWY--QPRHNVMI 200
BLAST of FC932518 vs. ExPASy Swiss-Prot
Match: SBP1_BOVIN (Selenium-binding protein 1 OS=Bos taurus GN=SELENBP1 PE=1 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.108e-67 Identity = 121/199 (60.80%), Postives = 150/199 (75.38%), Query Frame = 1 Query: 85 CAK-GPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYHLDTKHDQLI 675 C K GPGY +PL+AM GPRE+L+Y+ C+Y TG E PDYLATVD +P S YS+VIHRLP+P + DELHHSGWN+CSSC+GDS+ R L+LPSL+S R+YVVD PRAP LHKVVEP +I K LSY HT+HCLASG++++S LGD GN +G GF+LLD E F VKG WE+PG + GYDFWY +H+ +I Sbjct: 5 CGKCGPGYPSPLEAMKGPREELVYLPCIYRNTGTEAPDYLATVDVNPKSPQYSQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLLLPSLISSRVYVVDVATEPRAPKLHKVVEPEEIHAKCDLSYLHTSHCLASGEVMISALGDPRGNGKG-GFVLLDGETFEVKGTWEQPGGAAPMGYDFWY--QPRHNVMI 200
BLAST of FC932518 vs. ExPASy Swiss-Prot
Match: SBP1B_XENLA (Selenium-binding protein 1-B OS=Xenopus laevis GN=selenbp1-B PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 5.498e-67 Identity = 118/199 (59.30%), Postives = 147/199 (73.87%), Query Frame = 1 Query: 82 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYHLDTKHDQLI 675 C + GPGY +PLDAM GPRE+++Y+ C+Y TG KPDYLATVD DP S +YS+VIHRLP+P + DELHHSGWN+CSSCYGDSS R L+LP L+S R+YVVD +PRAP LHK VEP ++ K GL+ HT+HCL G+I++S LGD GN +G GF+LLD E F VKG WE G + FGYDFWY +H+ +I Sbjct: 4 CGSCGPGYKSPLDAMKGPREEIVYLPCIYRSTGINKPDYLATVDVDPKSPTYSQVIHRLPMPNVNDELHHSGWNTCSSCYGDSSKVRNKLILPCLISSRVYVVDVGTDPRAPRLHKTVEPHEVYWKCGLANLHTSHCLGCGEIMISALGDPCGNGKG-GFVLLDGETFEVKGNWEAEGETAQFGYDFWY--QPRHNVMI 199
BLAST of FC932518 vs. ExPASy Swiss-Prot
Match: SBP1_DANRE (Selenium-binding protein 1 OS=Danio rerio GN=selenbp1 PE=2 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 9.379e-67 Identity = 117/199 (58.79%), Postives = 147/199 (73.87%), Query Frame = 1 Query: 82 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYHLDTKHDQLI 675 C GPGY TPLDAM GPRE+++Y+ C+Y T +KPDYLATVD +P S ++ KVIHRLP+P + DELHHSGWN+CSSC+ D S +R L+LPSL+S RIYVVD +PRAP LHK VEP D+ K GL+ PHT+HCL SG I++S +GD GN +G GF+LLD E F V G WE+PG + FGYDFWY +H+ +I Sbjct: 5 CSGCGPGYKTPLDAMKGPREEIVYLPCIYRNTDIQKPDYLATVDINPQSPNFCKVIHRLPMPNLKDELHHSGWNACSSCFDDPSKRRNRLILPSLISSRIYVVDVGTDPRAPRLHKTVEPTDLFWKCGLANPHTSHCLGSGQIMISTMGDPSGNGKG-GFVLLDGETFEVIGNWEQPGDAAPFGYDFWY--QPRHNVMI 200
BLAST of FC932518 vs. ExPASy Swiss-Prot
Match: SBP1_XENTR (Selenium-binding protein 1 OS=Xenopus tropicalis GN=selenbp1 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 4.655e-66 Identity = 124/227 (54.63%), Postives = 155/227 (68.28%), Query Frame = 1 Query: 82 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYHLDTKHDQLI---MGSTLAFTKA-STSHVSDGLMGASV 747 C + GPGY TPLDAM GPRE++LY+ C+Y TG KPDYLATVD +P S YS+VIHRLP+P DELHHSGWN+CSSCYGD+S R L+LP L+S RIYVVD +PRAP +HK VEP ++ K GL+ HT+HCL G+I++S +GD GN +G GF+LLD E F VKG WE G + FGYDFWY +H+ +I G+ AF V G+ G S+ Sbjct: 4 CGSCGPGYKTPLDAMKGPREEILYLPCIYRNTGINKPDYLATVDVNPKSPKYSQVIHRLPMPNTNDELHHSGWNTCSSCYGDASKVRNKLILPCLISSRIYVVDVGTDPRAPRIHKTVEPYEVFWKCGLANLHTSHCLGCGEIMISSIGDPYGNGKG-GFVLLDGETFEVKGNWEAEGEAAPFGYDFWY--QPRHNVMISTEWGAPKAFALGFKMEEVQAGMYGHSL 227 The following BLAST results are available for this feature:
BLAST of FC932518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932518 ID=FC932518; Name=FC932518; organism=Citrus clementina; type=EST; length=750bpback to top |