FC932520

Overview
NameFC932520
Unique NameFC932520
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length748
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932520 vs. ExPASy Swiss-Prot
Match: PDAT_YEAST (Phospholipid:diacylglycerol acyltransferase OS=Saccharomyces cerevisiae GN=LRO1 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.154e-16
Identity = 66/210 (31.43%), Postives = 101/210 (48.10%), Query Frame = 2
Query:  134 TDAMRGFQ--IKETEKYGRIISFGKEESQLPSSQIPILNSKELLHGSATETVNSSCRGVWTEYGEMDR-ESFRKIAENKVYTSKTILDLLRFVAPKTMQR-AETHFSHGIADNLDDPKYE--HYKYWSNPLETKLPDAPDMEIYCLYGVGIPTERSYVYKLSPNDKCKSIPFRIDTSADGDQNSRLKGGVYFVDGDESVPVLSAGLMCAK 745
            T AM G +      E+   + ++G   S LP  +       E++ G    +   +       YG   R E     A NK  T K  +++   ++P+ +QR     +S G + N ++ +    H+K+WSNP+E  LP+AP M+IYC+YGV  PTER+YVYK    D   ++   ID  +        K  V+  +GD +VP L A  MC K
Sbjct:  389 TLAMYGLEKFFSRIERVKMLQTWGGIPSMLPKGE-------EVIWGDMKSSSEDALNNNTDTYGNFIRFERNTSDAFNKNLTMKDAINMTLSISPEWLQRRVHEQYSFGYSKNEEELRKNELHHKHWSNPMEVPLPEAPHMKIYCIYGVNNPTERAYVYK--EEDDSSALNLTIDYES--------KQPVFLTEGDGTVP-LVAHSMCHK 580          
BLAST of FC932520 vs. ExPASy Swiss-Prot
Match: PDAT_SCHPO (Phospholipid:diacylglycerol acyltransferase OS=Schizosaccharomyces pombe GN=plh1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.143e-14
Identity = 43/106 (40.57%), Postives = 64/106 (60.38%), Query Frame = 2
Query:  434 HFSHGIADNLDD--PKYEHYKYWSNPLETKLPDAPDMEIYCLYGVGIPTERSYVYKLSPNDKCKSIPFRIDTSADGDQNSRLKGGVYFVDGDESVPVLSAGLMCAK 745
            ++SHG+A    +     E    W NPLET LP APDM+IYC++GVG PTER Y Y  +P  +       ID+S   +  ++++ G+   DGD ++P+L+ GL+C K
Sbjct:  442 NYSHGLAWTEKEVLKNNEMPSKWINPLETSLPYAPDMKIYCVHGVGKPTERGYYYTNNPEGQPV-----IDSSV--NDGTKVENGIVMDDGDGTLPILALGLVCNK 540          
The following BLAST results are available for this feature:
BLAST of FC932520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PDAT_YEAST1.154e-1631.43Phospholipid:diacylglycerol acyltransferase OS=Sac... [more]
PDAT_SCHPO3.143e-1440.57Phospholipid:diacylglycerol acyltransferase OS=Sch... [more]
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Properties
Property NameValue
Genbank descriptionC34209E03EF PostHarveN Citrus clementina cDNA clone C34209E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932520 ID=FC932520; Name=FC932520; organism=Citrus clementina; type=EST; length=748bp
GAATTCCGTCGTGTCATTGTTGCCTAAAGGTGGAGAGACCATCTGGGGTG
ACTTGGATTGGTCTCCAGAGGAAGGGCATGCCTGCCAACTGGTAAAGAAA
GGAAACTTTCAGTGCTCTCCAAATGACAACTATACTGATGCAATGAGAGG
CTTCCAAATAAAAGAGACAGAGAAGTATGGAAGGATAATCTCTTTTGGAA
AGGAGGAATCGCAATTACCGTCATCACAGATCCCTATCCTTAATTCAAAG
GAGCTTTTGCATGGAAGTGCCACCGAAACTGTGAACTCATCATGTAGAGG
GGTTTGGACTGAATATGGCGAGATGGATAGGGAAAGCTTCAGGAAAATTG
CAGAAAATAAAGTTTACACATCAAAAACTATTCTTGATCTACTCCGATTT
GTGGCTCCAAAAACAATGCAACGAGCCGAGACTCATTTCTCTCATGGTAT
AGCAGACAATCTTGATGATCCCAAATATGAGCATTACAAGTACTGGTCCA
ATCCCCTTGAAACAAAGTTGCCTGATGCCCCGGACATGGAAATATATTGC
TTATACGGTGTTGGTATTCCAACTGAAAGATCATATGTTTACAAGCTCTC
ACCTAATGATAAGTGCAAGAGCATTCCATTTCGGATAGATACCTCTGCAG
ATGGAGATCAGAATAGCCGCTTGAAAGGTGGAGTCTACTTTGTCGATGGA
GACGAGAGCGTGCCAGTTCTAAGTGCTGGGCTCATGTGTGCTAAAGGA
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