FC932526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932526 vs. ExPASy Swiss-Prot
Match: PP157_ARATH (Pentatricopeptide repeat-containing protein At2g17033 OS=Arabidopsis thaliana GN=At2g17033 PE=2 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.103e-77 Identity = 138/241 (57.26%), Postives = 180/241 (74.69%), Query Frame = 2 Query: 2 SSPQFIALNALSHLLSPDITHPRLSSLAFPLYMRITEESWFQWNPKLVAELIAFLDKQGQREEAETLVLETLSKLESRERELVLFYCNLIDSFCKHGSKRGFDDTYTRLNQLVNSSSSVYVKRQALKSMISGLCEMGQPHEAENLIEEMRVKGLDPAGFECKCIIYGYGRLGLLEDMERIVNQMESDGTRVDTVCSNMVLSSYGDHNELSRMVLWLQKMKDSGIPFSVRTYNSVFESCSTI 724 +SP+ +ALN LSHLLS +HP LS A LY ITE SWF WNPKL+AELIA L+KQ + +E+ETL+ +S+L+S ER+ LF CNL++S K GS +GF + RL +++ SSSVYVK QA KSM+SGLC M QPH+AE +IEEMR++ + P FE K ++YGYGRLGL +DM R+V++M ++G ++DTVCSNMVLSSYG H+ L +M WLQK+K +PFS+RTYNSV SC TI Sbjct: 122 ASPKSVALNVLSHLLSDQTSHPHLSFFALSLYSEITEASWFDWNPKLIAELIALLNKQERFDESETLLSTAVSRLKSNERDFTLFLCNLVESNSKQGSIQGFSEASFRLREIIQRSSSVYVKTQAYKSMVSGLCNMDQPHDAERVIEEMRMEKIKPGLFEYKSVLYGYGRLGLFDDMNRVVHRMGTEGHKIDTVCSNMVLSSYGAHDALPQMGSWLQKLKGFNVPFSIRTYNSVLNSCPTI 362
BLAST of FC932526 vs. ExPASy Swiss-Prot
Match: PP424_ARATH (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana GN=At5g48730 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.996e-11 Identity = 51/222 (22.97%), Postives = 106/222 (47.75%), Query Frame = 2 Query: 62 HPRLSSL----AFPLYMRITEESWFQWNPKLVAELIAFLDKQGQREEAETLVLETLSKLESRERELVLFYCNLIDSFCKHGSKRGFDDTYTRLNQLVNSSSSVYVKRQALKSMISGLCEMGQPHEAENLIEEMRVKGLDPAGFECKCIIYGYGRLGLLEDME-RIVNQMESDGTRVDTVCSNMVLSSYGDHNELSRMVLWLQKMKDSGIPFSVRTYNSVFES 712 H R+++L A ++ + E+ W++ N + +LI L K Q E+A L E +++ E+ Y L+ ++ + G FD +T L ++ SS + +I ++ + ++L+ +MR +G+ P +I YG+ + +ME ++ + D + D+ N L ++G + ++ M +K + SGI ++RT+N + +S Sbjct: 122 HERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEV---YTALVSAYSRSGR---FDAAFTLLERM-KSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDS 336
BLAST of FC932526 vs. ExPASy Swiss-Prot
Match: PP376_ARATH (Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.996e-11 Identity = 50/202 (24.75%), Postives = 93/202 (46.04%), Query Frame = 2 Query: 113 ESWFQWNPKLVAELIAFLDKQGQREEAETLVLETLSK-LESRERELVLFYCNLIDSFCKHGSKRGFDDTYTRLNQLVNSSSSVYVKRQALKSMISGLCEMGQPHEAENLIEEMRVKGLDPAGFECKCIIYGYGRLGLLEDMERIVNQMESDGTRVDTVCSNMVLSSYGDHNELSRMVLWLQKMKDSGIPFSVRTYNSVFESC 715 +S + N + L+ L K+G+ E+AE ++ ++K L E + Y +ID +C+ G G R+ + A +I CE+G+ AE + +M++KG+ P+ +I GYGR + I+ +ME +GT + V +++ ++L + + M+D G+ VR YN + + C Sbjct: 347 DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE----VIYNTMIDGYCRKGDLVG-----ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539 The following BLAST results are available for this feature:
BLAST of FC932526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932526 ID=FC932526; Name=FC932526; organism=Citrus clementina; type=EST; length=726bpback to top |