FC932540
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932540 vs. ExPASy Swiss-Prot
Match: SERA_ARATH (D-3-phosphoglycerate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At1g17745 PE=1 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 1.826e-44 Identity = 92/147 (62.59%), Postives = 110/147 (74.83%), Query Frame = 3 Query: 231 KPTVLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVG*TLAVLG 671 KP +L+ EKLG+AG++LL EF +VDC+Y+LSPE+L K++ DALIVRSGTKV R+VFE++ GRLKVVGRAGVGIDNVDL AATE GCL RNVAQADAS+KAGKW+R+KYVGVSLVG TLAV+G Sbjct: 82 KPRILVTEKLGEAGVNLLREFGDVDCSYDLSPEDLKKKVAESDALIVRSGTKVTREVFEAAKGRLKVVGRAGVGIDNVDLQAATEHGCLVVNAPTANTVAAAEHGIALLASMARNVAQADASIKAGKWERSKYVGVSLVGKTLAVMG 228
BLAST of FC932540 vs. ExPASy Swiss-Prot
Match: SERA_METJA (D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii GN=serA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.042e-23 Identity = 60/144 (41.67%), Postives = 82/144 (56.94%), Query Frame = 3 Query: 240 VLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVG*TLAVLG 671 +L+ + L + + +L E V+ A L+ EEL KI D L+VRSGTKV RDV E A +LKV+GRAGVG+DN+D+ AATE G + RN+ QA AS+K G+W R ++ G+ L G TL V+G Sbjct: 4 ILVTDPLHEDAIKILEEVGEVEVATGLTKEELLEKIKDADVLVVRSGTKVTRDVIE-KAEKLKVIGRAGVGVDNIDVEAATEKGIIVVNAPDASSISVAELTMGLMLAAARNIPQATASLKRGEWDRKRFKGIELYGKTLGVIG 146
BLAST of FC932540 vs. ExPASy Swiss-Prot
Match: SERA_METTH (D-3-phosphoglycerate dehydrogenase OS=Methanobacterium thermoautotrophicum GN=serA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.152e-22 Identity = 59/144 (40.97%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 240 VLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVG*TLAVLG 671 VLIA+ + + G+ L E A V ++PEEL I DA++VRS TKV R+V E +A RLK++ RAGVG+DNVD+ AAT+ G + R +A AD SVK GKW++N+++G+ L G TL ++G Sbjct: 6 VLIADSINEKGISELEEVAEVVVNTTITPEELLDAIKDFDAIVVRSRTKVTREVIE-AAPRLKIIARAGVGVDNVDVKAATDRGIMVINAPESTSITVAEHSIGLMLALARKIAIADRSVKEGKWEKNRFMGIELNGKTLGIIG 148
BLAST of FC932540 vs. ExPASy Swiss-Prot
Match: SERA_PONAB (D-3-phosphoglycerate dehydrogenase OS=Pongo abelii GN=PHGDH PE=2 SV=3) HSP 1 Score: 94.3597 bits (233), Expect = 5.915e-19 Identity = 54/119 (45.38%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVG*TLAVLG 671 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L G TL +LG Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILG 152
BLAST of FC932540 vs. ExPASy Swiss-Prot
Match: SERA_PANTR (D-3-phosphoglycerate dehydrogenase OS=Pan troglodytes GN=PHGDH PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.915e-19 Identity = 54/119 (45.38%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVG*TLAVLG 671 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L G TL +LG Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILG 152
BLAST of FC932540 vs. ExPASy Swiss-Prot
Match: SERA_MACFA (D-3-phosphoglycerate dehydrogenase OS=Macaca fascicularis GN=PHGDH PE=2 SV=4) HSP 1 Score: 94.3597 bits (233), Expect = 5.915e-19 Identity = 54/119 (45.38%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVG*TLAVLG 671 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L G TL +LG Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILG 152
BLAST of FC932540 vs. ExPASy Swiss-Prot
Match: SERA_HUMAN (D-3-phosphoglycerate dehydrogenase OS=Homo sapiens GN=PHGDH PE=1 SV=4) HSP 1 Score: 94.3597 bits (233), Expect = 5.915e-19 Identity = 54/119 (45.38%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVG*TLAVLG 671 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L G TL +LG Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILG 152
BLAST of FC932540 vs. ExPASy Swiss-Prot
Match: SERA_ARCFU (D-3-phosphoglycerate dehydrogenase OS=Archaeoglobus fulgidus GN=serA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.725e-19 Identity = 52/145 (35.86%), Postives = 82/145 (56.55%), Query Frame = 3 Query: 240 VLIAEKLGQAGLDLLNEFA-NVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVG*TLAVLG 671 VL+AE + + +D + + V+ +S EEL ++ +A++VRS TKV+ +V ++ A LK++GRAGVG+DN+D+ AAT+ G + R + QAD SVK GKW+R K++G+ L G T V+G Sbjct: 3 VLVAEPISEEAIDYMRKNGLEVEVKTGMSREELIREVPKYEAIVVRSQTKVDAEVIQA-AKNLKIIGRAGVGVDNIDINAATQRGIVVVNAPGGNTISTAEHAIALMLAAARKIPQADRSVKEGKWERKKFMGIELRGKTAGVIG 146
BLAST of FC932540 vs. ExPASy Swiss-Prot
Match: SERA_RAT (D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus GN=Phgdh PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 1.009e-18 Identity = 54/119 (45.38%), Postives = 67/119 (56.30%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVG*TLAVLG 671 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW R K++G L G TL +LG Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMLMCLARQIPQATASMKDGKWDRKKFMGTELNGKTLGILG 152
BLAST of FC932540 vs. ExPASy Swiss-Prot
Match: SERA_MOUSE (D-3-phosphoglycerate dehydrogenase OS=Mus musculus GN=Phgdh PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 1.009e-18 Identity = 54/119 (45.38%), Postives = 67/119 (56.30%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVG*TLAVLG 671 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW R K++G L G TL +LG Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWDRKKFMGTELNGKTLGILG 152 The following BLAST results are available for this feature:
BLAST of FC932540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932540 ID=FC932540; Name=FC932540; organism=Citrus clementina; type=EST; length=673bpback to top |