FC932571

Overview
NameFC932571
Unique NameFC932571
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length752
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932571 vs. ExPASy Swiss-Prot
Match: K1530_HUMAN (Uncharacterized protein KIAA1530 OS=Homo sapiens GN=KIAA1530 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.212e-14
Identity = 37/143 (25.87%), Postives = 75/143 (52.45%), Query Frame = 3
Query:  240 KVRALIDKATNSTEREVDPRLLKAIKWVVRNSDSELRLAAQTLMDLMKRNHSQVRYLTLLIIDELFMRSKLFRTILVENMDQLLSLSIGFXXXXXXXXXXXXXXXXXXKAFEFLEKWNASFGVHYRQIRLGFDYLKNTLRLQF 668
            K+  L+++ T S E  ++P  +K +K + ++S+ +L  A + L+  + + H+++R     I++ELF+RS  FR ++V N  + L L++G                        +E WN  FG  Y+++ LG+ +L++  ++ F
Sbjct:    4 KLSKLVEELTTSGEPRLNPEKMKELKKICKSSEEQLSRAYRLLIAQLTQEHAEIRLSAFQIVEELFVRSHQFRMLVVSNFQEFLELTLGTDPAQPLPPPREAAQRLRQATTRAVEGWNEKFGEAYKKLALGYHFLRHNKKVDF 146          
BLAST of FC932571 vs. ExPASy Swiss-Prot
Match: K1530_MOUSE (Uncharacterized protein KIAA1530 OS=Mus musculus GN=Kiaa1530 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.870e-12
Identity = 35/122 (28.69%), Postives = 65/122 (53.28%), Query Frame = 3
Query:  303 LKAIKWVVRNSDSELRLAAQTLMDLMKRNHSQVRYLTLLIIDELFMRSKLFRTILVENMDQLLSLSIGFXXXXXXXXXXXXXXXXXXKAFEFLEKWNASFGVHYRQIRLGFDYLKNTLRLQF 668
            +K +K + ++S+ +L  A + L+  + + H+++R     I+DELF RS  FR +LV +  + L L++G                    A + +E WN  FG  Y+++ LG+ +LK+T ++ F
Sbjct:    1 MKELKKICKSSEEQLSHAYRLLITQLTQGHAEIRLSAFQIVDELFTRSHQFRMLLVSDFQEFLELTLGTDSDRPLPPPREAAQRLRQAAMQAVEGWNEKFGQAYKKLALGYHFLKHTKKVDF 122          
The following BLAST results are available for this feature:
BLAST of FC932571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
K1530_HUMAN9.212e-1425.87Uncharacterized protein KIAA1530 OS=Homo sapiens G... [more]
K1530_MOUSE3.870e-1228.69Uncharacterized protein KIAA1530 OS=Mus musculus G... [more]
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Properties
Property NameValue
Genbank descriptionC34210A10EF PostHarveN Citrus clementina cDNA clone C34210A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932571 ID=FC932571; Name=FC932571; organism=Citrus clementina; type=EST; length=752bp
GAAGATACTTTTAGGCTGTATGTATTTTCTTGCCGTCGTGTTCAATAGTG
GCTCTTATGTAAATTGATGGTACTAGGAGGCTAGAACTTGAAGAAGAAAA
CACCCAACCGACATCGTCATCGTGACGCTGCGGTAGCGCGCGTTGACCTG
AGATTAGGGATTTGGATTTTGAAATTAAAATTAATATATCATGTTCGCGT
TGGACTGATTGGCAAGCGAAAATGGGAGAGCAAGGAGGGAAGGTGAGGGC
CTTGATAGACAAGGCGACGAACTCGACGGAACGAGAGGTGGACCCACGTC
TCCTCAAGGCCATTAAATGGGTAGTTCGAAATTCGGATTCGGAGCTGCGA
CTCGCCGCTCAAACCCTCATGGACCTTATGAAACGCAACCATTCTCAGGT
CCGATATCTCACACTTCTCATAATTGATGAACTCTTCATGCGATCAAAGC
TTTTTAGGACCATTCTTGTTGAGAACATGGATCAGTTATTGAGTTTAAGT
ATTGGATTCAGAAGAAATTTACCACTTCCTGCGCCTCCAGCTATTGCATC
TATTTTGCGATCAAAGGCTTTTGAATTTTTGGAGAAATGGAATGCTTCTT
TTGGGGTTCACTACAGACAAATTAGATTAGGCTTTGATTACCTTAAAAAT
ACTCTCAGGCTCCAGTTTCCTATTTACAAGCAATGCAGCTCGGATCAGCG
GGAGAGACGGGAAGAGAGATGAGACAAAGAGATTTACGAAACAGTTGAAA
TG
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